RNA–Protein interactions for RNA: ENST00000351288.10

SMPD4-201, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2 BASIC

Gene SMPD4, Length 3,661 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-201ENST00000351288 FAM162BQ5T6X4 162 aa8.07□□□□□ -1.12
SMPD4-201ENST00000351288 C1orf122Q6ZSJ8 110 aa8.07□□□□□ -1.12
SMPD4-201ENST00000351288 YAE1D1Q9NRH1 226 aa8.07□□□□□ -1.12
SMPD4-201ENST00000351288 OR4C46A6NHA9 309 aa8.06□□□□□ -1.12
SMPD4-201ENST00000351288 BTF3P20290 206 aaKnown RBP8.06□□□□□ -1.12
SMPD4-201ENST00000351288 BMI1P35226 326 aa8.06□□□□□ -1.12
SMPD4-201ENST00000351288 Q6ZQT7 251 aa8.06□□□□□ -1.12
SMPD4-201ENST00000351288 FER1L6-AS1Q8NA97 138 aa8.06□□□□□ -1.12
SMPD4-201ENST00000351288 NPBQ8NG41 125 aa8.06□□□□□ -1.12
SMPD4-201ENST00000351288 PRSS22Q9GZN4 317 aa8.06□□□□□ -1.12
SMPD4-201ENST00000351288 C2orf70A6NJV1 201 aa8.06□□□□□ -1.12
SMPD4-201ENST00000351288 H3BVH4 76 aa8.06□□□□□ -1.12
SMPD4-201ENST00000351288 RHPN1-AS1Q9BWJ2 59 aa8.06□□□□□ -1.12
SMPD4-201ENST00000351288 MSRB1Q9NZV6 116 aa8.06□□□□□ -1.12
SMPD4-201ENST00000351288 NDUFA3O95167 84 aa8.06□□□□□ -1.12
SMPD4-201ENST00000351288 CTRLP40313 264 aa8.06□□□□□ -1.12
SMPD4-201ENST00000351288 ZNF124Q15973 351 aa8.06□□□□□ -1.12
SMPD4-201ENST00000351288 SAPCD1Q5SSQ6 148 aa8.06□□□□□ -1.12
SMPD4-201ENST00000351288 UNQ9165/PRO28630Q6UXU0 137 aa8.06□□□□□ -1.12
SMPD4-201ENST00000351288 TTC9CQ8N5M4 171 aa8.06□□□□□ -1.12
SMPD4-201ENST00000351288 F8W735 103 aaPredicted RBP8.05□□□□□ -1.12
SMPD4-201ENST00000351288 LINC00614P0C842 121 aa8.05□□□□□ -1.12
SMPD4-201ENST00000351288 LOC102724200A0A096LPH7 203 aaPredicted RBP8.05□□□□□ -1.12
SMPD4-201ENST00000351288 FOXE3Q13461 319 aa8.05□□□□□ -1.12
SMPD4-201ENST00000351288 COX19Q49B96 90 aa8.05□□□□□ -1.12
SMPD4-201ENST00000351288 PSMG4Q5JS54 123 aa8.05□□□□□ -1.12
SMPD4-201ENST00000351288 C5orf56Q8N8D9 126 aa8.05□□□□□ -1.12
SMPD4-201ENST00000351288 LINC01356Q8N9X3 169 aa8.05□□□□□ -1.12
SMPD4-201ENST00000351288 GCN1Q92616 2671 aaKnown RBP8.05□□□□□ -1.12
SMPD4-201ENST00000351288 FABP5P3A8MUU1 101 aa8.05□□□□□ -1.12
SMPD4-201ENST00000351288 GAS8-AS1O95177 125 aa8.05□□□□□ -1.12
SMPD4-201ENST00000351288 ZNF80P51504 273 aaPredicted RBP8.05□□□□□ -1.12
SMPD4-201ENST00000351288 DYNLRB2Q8TF09 96 aa8.05□□□□□ -1.12
SMPD4-201ENST00000351288 LAMTOR2Q9Y2Q5 125 aa8.05□□□□□ -1.12
SMPD4-201ENST00000351288 PHLDA3Q9Y5J5 127 aa8.05□□□□□ -1.12
SMPD4-201ENST00000351288 ITPR2Q14571 2701 aa8.05□□□□□ -1.12
SMPD4-201ENST00000351288 D6R8Y8 96 aa8.04□□□□□ -1.12
SMPD4-201ENST00000351288 HOXA3O43365 443 aaPredicted RBP8.04□□□□□ -1.12
SMPD4-201ENST00000351288 SMIM17P0DL12 118 aa8.04□□□□□ -1.12
SMPD4-201ENST00000351288 IFI27P40305 119 aaPredicted RBP8.04□□□□□ -1.12
SMPD4-201ENST00000351288 PRELID3AQ96N28 172 aa8.04□□□□□ -1.12
SMPD4-201ENST00000351288 TMEM70Q9BUB7 260 aa8.04□□□□□ -1.12
SMPD4-201ENST00000351288 AP5S1Q9NUS5 200 aa8.04□□□□□ -1.12
SMPD4-201ENST00000351288 UQCR10Q9UDW1 63 aa8.04□□□□□ -1.12
SMPD4-201ENST00000351288 ZFP30Q9Y2G7 519 aa8.04□□□□□ -1.12
SMPD4-201ENST00000351288 ATRQ13535 2644 aa8.04□□□□□ -1.12
SMPD4-201ENST00000351288 A0A0G2JLM5 398 aa8.04□□□□□ -1.12
SMPD4-201ENST00000351288 LBHQ53QV2 105 aaPredicted RBP8.04□□□□□ -1.12
SMPD4-201ENST00000351288 NIPBLQ6KC79 2804 aaeCLIP8.04□□□□□ -1.12
SMPD4-201ENST00000351288 TCF21O43680 179 aa8.04□□□□□ -1.12
SMPD4-201ENST00000351288 FCER1GP30273 86 aa8.04□□□□□ -1.12
SMPD4-201ENST00000351288 C8orf86Q6ZUL3 223 aa8.04□□□□□ -1.12
SMPD4-201ENST00000351288 ZNF843Q8N446 348 aa8.04□□□□□ -1.12
SMPD4-201ENST00000351288 WIPF2Q8TF74 440 aaPredicted RBP8.04□□□□□ -1.12
SMPD4-201ENST00000351288 TSPOP30536 169 aa8.03□□□□□ -1.12
SMPD4-201ENST00000351288 PLP1P60201 277 aa8.03□□□□□ -1.12
SMPD4-201ENST00000351288 TMEM8BA6NDV4 472 aa8.03□□□□□ -1.12
SMPD4-201ENST00000351288 ZNF502Q8TBZ5 544 aa8.02□□□□□ -1.12
SMPD4-201ENST00000351288 PRR25Q96S07 402 aa8.02□□□□□ -1.12
SMPD4-201ENST00000351288 NDUFS8O00217 210 aa8.02□□□□□ -1.13
SMPD4-201ENST00000351288 EGR2P11161 476 aaPredicted RBP8.02□□□□□ -1.13
SMPD4-201ENST00000351288 CCDC140Q96MF4 163 aa8.02□□□□□ -1.13
SMPD4-201ENST00000351288 MAP1LC3CQ9BXW4 147 aa8.02□□□□□ -1.13
SMPD4-201ENST00000351288 GOLT1BQ9Y3E0 138 aa8.02□□□□□ -1.13
SMPD4-201ENST00000351288 TRAV12-2A0A075B6T6 113 aa8.02□□□□□ -1.13
SMPD4-201ENST00000351288 TRBV7-1A0A0A6YYK4 115 aa8.02□□□□□ -1.13
SMPD4-201ENST00000351288 SYS1-DBNDD2H3BUS1 97 aa8.02□□□□□ -1.13
SMPD4-201ENST00000351288 GATA1P15976 413 aaPredicted RBP8.02□□□□□ -1.13
SMPD4-201ENST00000351288 RAB9AP51151 201 aa8.02□□□□□ -1.13
SMPD4-201ENST00000351288 SRSF8Q9BRL6 282 aaKnown RBP8.02□□□□□ -1.13
SMPD4-201ENST00000351288 SMAD5-AS1Q9Y6J3 95 aa8.02□□□□□ -1.13
SMPD4-201ENST00000351288 TRAV9-2A0A087WT02 112 aa8.01□□□□□ -1.13
SMPD4-201ENST00000351288 TRAV12-3A0A0B4J271 114 aa8.01□□□□□ -1.13
SMPD4-201ENST00000351288 MPV17L2Q567V2 206 aa8.01□□□□□ -1.13
SMPD4-201ENST00000351288 TRAV26-2A0A0B4J265 109 aa8.01□□□□□ -1.13
SMPD4-201ENST00000351288 MRPS12O15235 138 aaKnown RBP8.01□□□□□ -1.13
SMPD4-201ENST00000351288 SCGB2A2Q13296 93 aa8.01□□□□□ -1.13
SMPD4-201ENST00000351288 ATP5L2Q7Z4Y8 100 aa8.01□□□□□ -1.13
SMPD4-201ENST00000351288 F8P00451 2351 aa8.01□□□□□ -1.13
SMPD4-201ENST00000351288 A0A087X0K7 114 aa8.01□□□□□ -1.13
SMPD4-201ENST00000351288 DLEU1O43261 78 aa8.01□□□□□ -1.13
SMPD4-201ENST00000351288 KLF5Q13887 457 aaPredicted RBP8.01□□□□□ -1.13
SMPD4-201ENST00000351288 COL5A1-AS1Q5SY13 56 aa8.01□□□□□ -1.13
SMPD4-201ENST00000351288 LINC00477Q96M19 166 aa8.01□□□□□ -1.13
SMPD4-201ENST00000351288 AGPAT4-IT1Q9H0P7 198 aa8.01□□□□□ -1.13
SMPD4-201ENST00000351288 TMEM14CQ9P0S9 112 aa8.01□□□□□ -1.13
SMPD4-201ENST00000351288 BUB3O43684 328 aa8□□□□□ -1.13
SMPD4-201ENST00000351288 SLC25A16P16260 332 aa8□□□□□ -1.13
SMPD4-201ENST00000351288 NMUP48645 174 aa8□□□□□ -1.13
SMPD4-201ENST00000351288 ZNF492Q9P255 531 aa8□□□□□ -1.13
SMPD4-201ENST00000351288 WI2-2373I1.2A0A1W2PRP0 233 aa8□□□□□ -1.13
SMPD4-201ENST00000351288 IGF1P05019 195 aa8□□□□□ -1.13
SMPD4-201ENST00000351288 CD7P09564 240 aa8□□□□□ -1.13
SMPD4-201ENST00000351288 RASL11AQ6T310 242 aa8□□□□□ -1.13
SMPD4-201ENST00000351288 AJUBAQ96IF1 538 aa8□□□□□ -1.13
SMPD4-201ENST00000351288 SLC50A1Q9BRV3 221 aa8□□□□□ -1.13
SMPD4-201ENST00000351288 PEF1Q9UBV8 284 aaKnown RBP8□□□□□ -1.13
SMPD4-201ENST00000351288 EDN2P20800 178 aa8□□□□□ -1.13
SMPD4-201ENST00000351288 ID1P41134 155 aa8□□□□□ -1.13
SMPD4-201ENST00000351288 SRSF2Q01130 221 aaKnown RBP8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 1109.3 ms