RNA–Protein interactions for RNA: ENST00000350028.4

SAMM50-201, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SAMM50, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-201ENST00000350028 RHPN1-AS1Q9BWJ2 59 aa12.71□□□□□ -0.38
SAMM50-201ENST00000350028 TMEM213A2RRL7 107 aa12.7□□□□□ -0.38
SAMM50-201ENST00000350028 FAM181BA6NEQ2 426 aa12.69□□□□□ -0.38
SAMM50-201ENST00000350028 TM4SF20Q53R12 229 aa12.69□□□□□ -0.38
SAMM50-201ENST00000350028 OR10J6PQ8NGY7 276 aa12.69□□□□□ -0.38
SAMM50-201ENST00000350028 C14orf144Q96I85 54 aa12.69□□□□□ -0.38
SAMM50-201ENST00000350028 CNFNQ9BYD5 112 aa12.69□□□□□ -0.38
SAMM50-201ENST00000350028 UFC1Q9Y3C8 167 aa12.69□□□□□ -0.38
SAMM50-201ENST00000350028 U3KQK5 164 aa12.69□□□□□ -0.38
SAMM50-201ENST00000350028 TWIST1Q15672 202 aa12.68□□□□□ -0.38
SAMM50-201ENST00000350028 C20orf144Q9BQM9 153 aa12.68□□□□□ -0.38
SAMM50-201ENST00000350028 NDUFAF3Q9BU61 184 aa12.68□□□□□ -0.38
SAMM50-201ENST00000350028 VAMP8Q9BV40 100 aa12.68□□□□□ -0.38
SAMM50-201ENST00000350028 AKAP9Q99996 3911 aa12.68□□□□□ -0.38
SAMM50-201ENST00000350028 PRRC2AP48634 2157 aaKnown RBP12.68□□□□□ -0.38
SAMM50-201ENST00000350028 SVEP1Q4LDE5 3571 aa12.68□□□□□ -0.38
SAMM50-201ENST00000350028 ELANEP08246 267 aa12.68□□□□□ -0.38
SAMM50-201ENST00000350028 OR5AL1P0C617 328 aa12.68□□□□□ -0.38
SAMM50-201ENST00000350028 RPL11P62913 178 aaKnown RBP12.68□□□□□ -0.38
SAMM50-201ENST00000350028 FOXE3Q13461 319 aa12.68□□□□□ -0.38
SAMM50-201ENST00000350028 SAMD13Q5VXD3 122 aa12.68□□□□□ -0.38
SAMM50-201ENST00000350028 KRTAP1-3Q8IUG1 177 aa12.68□□□□□ -0.38
SAMM50-201ENST00000350028 ZNF702PQ9H963 129 aa12.68□□□□□ -0.38
SAMM50-201ENST00000350028 IGKV3D-20A0A0C4DH25 116 aa12.67□□□□□ -0.38
SAMM50-201ENST00000350028 M0QZ24 198 aa12.67□□□□□ -0.38
SAMM50-201ENST00000350028 HOXA3O43365 443 aaPredicted RBP12.67□□□□□ -0.38
SAMM50-201ENST00000350028 BTF3P20290 206 aaKnown RBP12.67□□□□□ -0.38
SAMM50-201ENST00000350028 TMEM191AQ9H0A3 160 aa12.67□□□□□ -0.38
SAMM50-201ENST00000350028 ZNF469Q96JG9 3925 aaPredicted RBP12.67□□□□□ -0.38
SAMM50-201ENST00000350028 IGHV1-24A0A0C4DH33 117 aa12.66□□□□□ -0.38
SAMM50-201ENST00000350028 SSTP61278 116 aa12.66□□□□□ -0.38
SAMM50-201ENST00000350028 EBLN2Q6P2I7 272 aa12.66□□□□□ -0.38
SAMM50-201ENST00000350028 AMN1Q8IY45 258 aa12.66□□□□□ -0.38
SAMM50-201ENST00000350028 MUC21A0A0G2JKD1 596 aa12.65□□□□□ -0.38
SAMM50-201ENST00000350028 MUC21A0A140T8X8 626 aa12.65□□□□□ -0.38
SAMM50-201ENST00000350028 C2orf70A6NJV1 201 aa12.65□□□□□ -0.38
SAMM50-201ENST00000350028 PMCHL1Q16048 86 aa12.65□□□□□ -0.38
SAMM50-201ENST00000350028 TDRG1Q3Y452 100 aa12.65□□□□□ -0.38
SAMM50-201ENST00000350028 MRPL51Q4U2R6 128 aaKnown RBP12.65□□□□□ -0.38
SAMM50-201ENST00000350028 MUC21Q5SSG8 566 aa12.65□□□□□ -0.38
SAMM50-201ENST00000350028 C10orf99Q6UWK7 81 aa12.65□□□□□ -0.38
SAMM50-201ENST00000350028 ORMDL3Q8N138 153 aa12.65□□□□□ -0.38
SAMM50-201ENST00000350028 C11orf21Q9P2W6 132 aa12.65□□□□□ -0.38
SAMM50-201ENST00000350028 D6R8Y8 96 aa12.65□□□□□ -0.38
SAMM50-201ENST00000350028 RPLP1P05386 114 aaKnown RBP12.65□□□□□ -0.38
SAMM50-201ENST00000350028 TEX29Q8N6K0 151 aa12.65□□□□□ -0.38
SAMM50-201ENST00000350028 PRSS3P2Q8NHM4 247 aa12.65□□□□□ -0.38
SAMM50-201ENST00000350028 MYOZ3Q8TDC0 251 aa12.65□□□□□ -0.38
SAMM50-201ENST00000350028 PRELID3AQ96N28 172 aa12.65□□□□□ -0.38
SAMM50-201ENST00000350028 ZANQ9Y493 2812 aa12.64□□□□□ -0.39
SAMM50-201ENST00000350028 CSPG4Q6UVK1 2322 aa12.64□□□□□ -0.39
SAMM50-201ENST00000350028 TRBV7-9A0A0J9YWB2 115 aa12.64□□□□□ -0.39
SAMM50-201ENST00000350028 LEPROTL1O95214 131 aa12.64□□□□□ -0.39
SAMM50-201ENST00000350028 CSN3P07498 182 aa12.64□□□□□ -0.39
SAMM50-201ENST00000350028 LGALS1P09382 135 aaKnown RBP12.64□□□□□ -0.39
SAMM50-201ENST00000350028 ID1P41134 155 aa12.64□□□□□ -0.39
SAMM50-201ENST00000350028 FA2HQ7L5A8 372 aa12.64□□□□□ -0.39
SAMM50-201ENST00000350028 OR8A1Q8NGG7 326 aa12.64□□□□□ -0.39
SAMM50-201ENST00000350028 PAM16Q9Y3D7 125 aa12.64□□□□□ -0.39
SAMM50-201ENST00000350028 RNF152Q8N8N0 203 aa12.63□□□□□ -0.39
SAMM50-201ENST00000350028 TMEM70Q9BUB7 260 aa12.63□□□□□ -0.39
SAMM50-201ENST00000350028 AP5S1Q9NUS5 200 aa12.63□□□□□ -0.39
SAMM50-201ENST00000350028 CELSR1Q9NYQ6 3014 aa12.63□□□□□ -0.39
SAMM50-201ENST00000350028 Q8N2B8 174 aa12.62□□□□□ -0.39
SAMM50-201ENST00000350028 ZFAND2AQ8N6M9 145 aa12.62□□□□□ -0.39
SAMM50-201ENST00000350028 FAM19A4Q96LR4 140 aa12.62□□□□□ -0.39
SAMM50-201ENST00000350028 UBE2E2Q96LR5 201 aa12.62□□□□□ -0.39
SAMM50-201ENST00000350028 CCDC168Q8NDH2 2452 aa12.62□□□□□ -0.39
SAMM50-201ENST00000350028 IGKV3-7A0A075B6H7 116 aa12.62□□□□□ -0.39
SAMM50-201ENST00000350028 TRAV21A0A0B4J279 112 aa12.62□□□□□ -0.39
SAMM50-201ENST00000350028 PPBPP02775 128 aa12.62□□□□□ -0.39
SAMM50-201ENST00000350028 CKS2P33552 79 aa12.62□□□□□ -0.39
SAMM50-201ENST00000350028 MSRB1Q9NZV6 116 aa12.62□□□□□ -0.39
SAMM50-201ENST00000350028 LGALS9O00182 355 aa12.61□□□□□ -0.39
SAMM50-201ENST00000350028 CACNG7P62955 275 aa12.61□□□□□ -0.39
SAMM50-201ENST00000350028 PRR9Q5T870 116 aa12.61□□□□□ -0.39
SAMM50-201ENST00000350028 APRG1Q8IVJ8 170 aa12.61□□□□□ -0.39
SAMM50-201ENST00000350028 MIEN1Q9BRT3 115 aa12.61□□□□□ -0.39
SAMM50-201ENST00000350028 HSPB8Q9UJY1 196 aa12.61□□□□□ -0.39
SAMM50-201ENST00000350028 FLNBO75369 2602 aaKnown RBP12.6□□□□□ -0.39
SAMM50-201ENST00000350028 BAHCC1Q9P281 2608 aa12.6□□□□□ -0.39
SAMM50-201ENST00000350028 IGHV4-4A0A075B6R2 117 aa12.6□□□□□ -0.39
SAMM50-201ENST00000350028 CRXO43186 299 aaPredicted RBP12.6□□□□□ -0.39
SAMM50-201ENST00000350028 SNAI2O43623 268 aa12.6□□□□□ -0.39
SAMM50-201ENST00000350028 RNF185Q96GF1 192 aa12.6□□□□□ -0.39
SAMM50-201ENST00000350028 SIGLEC8Q9NYZ4 499 aa12.6□□□□□ -0.39
SAMM50-201ENST00000350028 LAMTOR2Q9Y2Q5 125 aa12.6□□□□□ -0.39
SAMM50-201ENST00000350028 EDN2P20800 178 aa12.59□□□□□ -0.39
SAMM50-201ENST00000350028 SPATA45Q537H7 98 aa12.59□□□□□ -0.39
SAMM50-201ENST00000350028 SMIM15Q7Z3B0 74 aa12.59□□□□□ -0.39
SAMM50-201ENST00000350028 TMEM86BQ8N661 226 aa12.59□□□□□ -0.39
SAMM50-201ENST00000350028 OR10AG1Q8NH19 301 aa12.59□□□□□ -0.39
SAMM50-201ENST00000350028 DCANP1Q8TF63 244 aa12.59□□□□□ -0.39
SAMM50-201ENST00000350028 ITPR3Q14573 2671 aa12.59□□□□□ -0.39
SAMM50-201ENST00000350028 C20orf202A1L168 122 aa12.59□□□□□ -0.39
SAMM50-201ENST00000350028 SYS1-DBNDD2H3BUS1 97 aa12.59□□□□□ -0.39
SAMM50-201ENST00000350028 SRD5A1P18405 259 aa12.59□□□□□ -0.39
SAMM50-201ENST00000350028 IFI27P40305 119 aaPredicted RBP12.59□□□□□ -0.39
SAMM50-201ENST00000350028 LBHQ53QV2 105 aaPredicted RBP12.59□□□□□ -0.39
SAMM50-201ENST00000350028 MAP1LC3CQ9BXW4 147 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms