RNA–Protein interactions for RNA: ENST00000348495.10

SSBP4-202, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP4, Length 1,721 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-202ENST00000348495 M0R2Z0 102 aa19.87■□□□□ 0.77
SSBP4-202ENST00000348495 CRIP1P50238 77 aa19.87■□□□□ 0.77
SSBP4-202ENST00000348495 PNRC1Q12796 327 aaPredicted RBP19.87■□□□□ 0.77
SSBP4-202ENST00000348495 SMUG1Q53HV7 270 aa19.87■□□□□ 0.77
SSBP4-202ENST00000348495 MGST1P10620 155 aaKnown RBP19.86■□□□□ 0.77
SSBP4-202ENST00000348495 ZNF80P51504 273 aaPredicted RBP19.86■□□□□ 0.77
SSBP4-202ENST00000348495 RPL35AP18077 110 aaKnown RBP19.85■□□□□ 0.77
SSBP4-202ENST00000348495 OR5I1Q13606 314 aa19.85■□□□□ 0.77
SSBP4-202ENST00000348495 ADIRFQ15847 76 aa19.85■□□□□ 0.77
SSBP4-202ENST00000348495 DNAH3Q8TD57 4116 aa19.85■□□□□ 0.77
SSBP4-202ENST00000348495 CRXO43186 299 aaPredicted RBP19.85■□□□□ 0.77
SSBP4-202ENST00000348495 GPX1P07203 203 aa19.85■□□□□ 0.77
SSBP4-202ENST00000348495 IGHV4-30-4P0DP06 118 aa19.85■□□□□ 0.77
SSBP4-202ENST00000348495 LINC00322Q6ZN03 302 aaPredicted RBP19.85■□□□□ 0.77
SSBP4-202ENST00000348495 ISOC2Q96AB3 205 aa19.85■□□□□ 0.77
SSBP4-202ENST00000348495 APOC3P02656 99 aa19.84■□□□□ 0.77
SSBP4-202ENST00000348495 FXYD7P58549 80 aa19.84■□□□□ 0.77
SSBP4-202ENST00000348495 J3KRW8 73 aa19.83■□□□□ 0.77
SSBP4-202ENST00000348495 GIG44P09565 113 aaPredicted RBP19.83■□□□□ 0.77
SSBP4-202ENST00000348495 GFI1BQ5VTD9 330 aa19.83■□□□□ 0.77
SSBP4-202ENST00000348495 BIN3Q9NQY0 253 aa19.83■□□□□ 0.77
SSBP4-202ENST00000348495 A8MZ25 164 aa19.82■□□□□ 0.76
SSBP4-202ENST00000348495 NUTF2P61970 127 aaKnown RBP19.82■□□□□ 0.76
SSBP4-202ENST00000348495 BTN1A1Q13410 526 aa19.82■□□□□ 0.76
SSBP4-202ENST00000348495 PRR27Q6MZM9 219 aa19.82■□□□□ 0.76
SSBP4-202ENST00000348495 MORN3Q6PF18 240 aaPredicted RBP19.82■□□□□ 0.76
SSBP4-202ENST00000348495 TRAV12-2A0A075B6T6 113 aa19.82■□□□□ 0.76
SSBP4-202ENST00000348495 RNASE4P34096 147 aaKnown RBP19.82■□□□□ 0.76
SSBP4-202ENST00000348495 Q6AWC8 147 aa19.82■□□□□ 0.76
SSBP4-202ENST00000348495 AMBPP02760 352 aa19.81■□□□□ 0.76
SSBP4-202ENST00000348495 PFN1P07737 140 aaKnown RBP19.81■□□□□ 0.76
SSBP4-202ENST00000348495 FAM162BQ5T6X4 162 aa19.81■□□□□ 0.76
SSBP4-202ENST00000348495 Q6ZQT7 251 aa19.81■□□□□ 0.76
SSBP4-202ENST00000348495 TUBA4BQ9H853 241 aa19.81■□□□□ 0.76
SSBP4-202ENST00000348495 LOC102724200A0A096LPH7 203 aaPredicted RBP19.8■□□□□ 0.76
SSBP4-202ENST00000348495 C7orf71A4D174 169 aa19.8■□□□□ 0.76
SSBP4-202ENST00000348495 C19orf71A6NCJ1 209 aa19.8■□□□□ 0.76
SSBP4-202ENST00000348495 SVBPQ8N300 66 aa19.79■□□□□ 0.76
SSBP4-202ENST00000348495 SH2D1AO60880 128 aa19.79■□□□□ 0.76
SSBP4-202ENST00000348495 ZNF324O75467 553 aaPredicted RBP19.79■□□□□ 0.76
SSBP4-202ENST00000348495 FAM231DQ6ZW35 169 aa19.79■□□□□ 0.76
SSBP4-202ENST00000348495 CLRN3Q8NCR9 226 aa19.79■□□□□ 0.76
SSBP4-202ENST00000348495 FABP5P3A8MUU1 101 aa19.78■□□□□ 0.76
SSBP4-202ENST00000348495 CSTL1Q9H114 145 aa19.78■□□□□ 0.76
SSBP4-202ENST00000348495 RNASE7Q9H1E1 156 aaKnown RBP19.78■□□□□ 0.76
SSBP4-202ENST00000348495 XCL2Q9UBD3 114 aa19.78■□□□□ 0.76
SSBP4-202ENST00000348495 TRAV12-3A0A0B4J271 114 aa19.77■□□□□ 0.76
SSBP4-202ENST00000348495 TRAV21A0A0B4J279 112 aa19.77■□□□□ 0.76
SSBP4-202ENST00000348495 KIR2DL5BA0A0G2JN68 375 aa19.77■□□□□ 0.76
SSBP4-202ENST00000348495 KIR2DL5BA0A0G2JPC4 375 aa19.77■□□□□ 0.76
SSBP4-202ENST00000348495 M0R036 132 aa19.77■□□□□ 0.76
SSBP4-202ENST00000348495 PRB2P02812 416 aaPredicted RBP19.77■□□□□ 0.76
SSBP4-202ENST00000348495 RBMY1A1P0DJD3 496 aaKnown RBP19.77■□□□□ 0.76
SSBP4-202ENST00000348495 RBMY1CP0DJD4 496 aa19.77■□□□□ 0.76
SSBP4-202ENST00000348495 RBMY1FQ15415 496 aaKnown RBP19.77■□□□□ 0.76
SSBP4-202ENST00000348495 KIR2DL5AQ8N109 375 aa19.77■□□□□ 0.76
SSBP4-202ENST00000348495 KIR2DL5BQ8NHK3 375 aa19.77■□□□□ 0.76
SSBP4-202ENST00000348495 SFRP2Q96HF1 295 aa19.77■□□□□ 0.76
SSBP4-202ENST00000348495 S100A1P23297 94 aa19.76■□□□□ 0.75
SSBP4-202ENST00000348495 NUDT10Q8NFP7 164 aa19.76■□□□□ 0.75
SSBP4-202ENST00000348495 NUDT11Q96G61 164 aa19.76■□□□□ 0.75
SSBP4-202ENST00000348495 OSTCQ9NRP0 149 aa19.76■□□□□ 0.75
SSBP4-202ENST00000348495 ERVFC1-1P60608 527 aa19.76■□□□□ 0.75
SSBP4-202ENST00000348495 C11orf21Q9P2W6 132 aa19.76■□□□□ 0.75
SSBP4-202ENST00000348495 B4DEV8 164 aa19.75■□□□□ 0.75
SSBP4-202ENST00000348495 IBA57Q5T440 356 aaKnown RBP19.75■□□□□ 0.75
SSBP4-202ENST00000348495 CSNK1G2-AS1Q8NCQ2 148 aa19.75■□□□□ 0.75
SSBP4-202ENST00000348495 C1QTNF4Q9BXJ3 329 aa19.75■□□□□ 0.75
SSBP4-202ENST00000348495 K7EIL1 84 aa19.74■□□□□ 0.75
SSBP4-202ENST00000348495 SNAPINO95295 136 aa19.74■□□□□ 0.75
SSBP4-202ENST00000348495 CA1P00915 261 aaPredicted RBP19.74■□□□□ 0.75
SSBP4-202ENST00000348495 INSP01308 110 aa19.74■□□□□ 0.75
SSBP4-202ENST00000348495 C20orf144Q9BQM9 153 aa19.74■□□□□ 0.75
SSBP4-202ENST00000348495 APOC4P55056 127 aa19.73■□□□□ 0.75
SSBP4-202ENST00000348495 DAZAP1Q96EP5 407 aaKnown RBP19.73■□□□□ 0.75
SSBP4-202ENST00000348495 RNF212Q495C1 297 aa19.73■□□□□ 0.75
SSBP4-202ENST00000348495 P01737 135 aa19.72■□□□□ 0.75
SSBP4-202ENST00000348495 RHEBQ15382 184 aa19.72■□□□□ 0.75
SSBP4-202ENST00000348495 OR10G8Q8NGN5 311 aa19.72■□□□□ 0.75
SSBP4-202ENST00000348495 C7orf77A4D0Y5 90 aa19.71■□□□□ 0.75
SSBP4-202ENST00000348495 LINC01559Q495D7 138 aa19.71■□□□□ 0.75
SSBP4-202ENST00000348495 ZNF575Q86XF7 245 aa19.71■□□□□ 0.75
SSBP4-202ENST00000348495 C1orf158Q8N1D5 194 aa19.71■□□□□ 0.75
SSBP4-202ENST00000348495 C15orf54Q8N8G6 183 aa19.71■□□□□ 0.75
SSBP4-202ENST00000348495 V9GYV3 84 aa19.71■□□□□ 0.75
SSBP4-202ENST00000348495 IGKV3D-20A0A0C4DH25 116 aa19.71■□□□□ 0.75
SSBP4-202ENST00000348495 MT-ND4LP03901 98 aa19.71■□□□□ 0.75
SSBP4-202ENST00000348495 FRMD6-AS1P0C7T7 363 aa19.71■□□□□ 0.75
SSBP4-202ENST00000348495 ATRAIDQ6UW56 229 aa19.7■□□□□ 0.74
SSBP4-202ENST00000348495 RPP21Q9H633 154 aaKnown RBP19.7■□□□□ 0.74
SSBP4-202ENST00000348495 ANAPC16Q96DE5 110 aa19.69■□□□□ 0.74
SSBP4-202ENST00000348495 UBE2CO00762 179 aa19.68■□□□□ 0.74
SSBP4-202ENST00000348495 GATCO43716 136 aaKnown RBP19.68■□□□□ 0.74
SSBP4-202ENST00000348495 ORM1P02763 201 aa19.68■□□□□ 0.74
SSBP4-202ENST00000348495 RPL19P84098 196 aaKnown RBP19.68■□□□□ 0.74
SSBP4-202ENST00000348495 TDRG1Q3Y452 100 aa19.68■□□□□ 0.74
SSBP4-202ENST00000348495 ANXA2RQ3ZCQ2 193 aa19.68■□□□□ 0.74
SSBP4-202ENST00000348495 A0A087WWC5 75 aa19.68■□□□□ 0.74
SSBP4-202ENST00000348495 ZNF705GA8MUZ8 300 aaPredicted RBP19.68■□□□□ 0.74
SSBP4-202ENST00000348495 H7BYZ3 331 aa19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms