RNA–Protein interactions for RNA: ENST00000347849.7

PTPN18-202, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 1 (best) BASIC

Gene PTPN18, Length 2,472 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-202ENST00000347849 SAP30O75446 220 aa16.46■□□□□ 0.23
PTPN18-202ENST00000347849 CTSGP08311 255 aa16.46■□□□□ 0.23
PTPN18-202ENST00000347849 KRTAP10-9P60411 292 aa16.46■□□□□ 0.23
PTPN18-202ENST00000347849 MRPL51Q4U2R6 128 aaKnown RBP16.46■□□□□ 0.23
PTPN18-202ENST00000347849 OR1N2Q8NGR9 330 aa16.46■□□□□ 0.23
PTPN18-202ENST00000347849 AAMDCQ9H7C9 122 aa16.46■□□□□ 0.23
PTPN18-202ENST00000347849 U3KQK5 164 aa16.46■□□□□ 0.23
PTPN18-202ENST00000347849 C9orf118A6NHY6 69 aa16.45■□□□□ 0.22
PTPN18-202ENST00000347849 MAPK1IP1LQ8NDC0 245 aa16.45■□□□□ 0.22
PTPN18-202ENST00000347849 A6NDN8 102 aa16.45■□□□□ 0.22
PTPN18-202ENST00000347849 H3BRM9 83 aa16.45■□□□□ 0.22
PTPN18-202ENST00000347849 SH2D1AO60880 128 aa16.45■□□□□ 0.22
PTPN18-202ENST00000347849 WFDC3Q8IUB2 231 aa16.45■□□□□ 0.22
PTPN18-202ENST00000347849 ANKRD17O75179 2603 aaKnown RBP16.44■□□□□ 0.22
PTPN18-202ENST00000347849 PRSS57Q6UWY2 283 aa16.44■□□□□ 0.22
PTPN18-202ENST00000347849 RAB37Q96AX2 223 aa16.44■□□□□ 0.22
PTPN18-202ENST00000347849 JMJD8Q96S16 334 aa16.44■□□□□ 0.22
PTPN18-202ENST00000347849 MEGF9Q9H1U4 602 aa16.44■□□□□ 0.22
PTPN18-202ENST00000347849 HIF1ANQ9NWT6 349 aa16.44■□□□□ 0.22
PTPN18-202ENST00000347849 ABCA12Q86UK0 2595 aa16.44■□□□□ 0.22
PTPN18-202ENST00000347849 SMAD7O15105 426 aaKnown RBP16.44■□□□□ 0.22
PTPN18-202ENST00000347849 HBDP02042 147 aa16.44■□□□□ 0.22
PTPN18-202ENST00000347849 COX6B1P14854 86 aa16.44■□□□□ 0.22
PTPN18-202ENST00000347849 C15orf32Q32M92 178 aa16.44■□□□□ 0.22
PTPN18-202ENST00000347849 GTF2H5Q6ZYL4 71 aa16.44■□□□□ 0.22
PTPN18-202ENST00000347849 FAM110DQ8TAY7 271 aaPredicted RBP16.44■□□□□ 0.22
PTPN18-202ENST00000347849 S100A7P31151 101 aa16.43■□□□□ 0.22
PTPN18-202ENST00000347849 CKS2P33552 79 aa16.43■□□□□ 0.22
PTPN18-202ENST00000347849 KIR3DS1Q14943 382 aa16.43■□□□□ 0.22
PTPN18-202ENST00000347849 LY6EQ16553 131 aa16.43■□□□□ 0.22
PTPN18-202ENST00000347849 UFSP1Q6NVU6 142 aa16.43■□□□□ 0.22
PTPN18-202ENST00000347849 ZNF48Q96MX3 618 aaPredicted RBP16.43■□□□□ 0.22
PTPN18-202ENST00000347849 CSTL1Q9H114 145 aa16.43■□□□□ 0.22
PTPN18-202ENST00000347849 NBPF19A0A087WUL8 3843 aa16.43■□□□□ 0.22
PTPN18-202ENST00000347849 NMUP48645 174 aa16.43■□□□□ 0.22
PTPN18-202ENST00000347849 TWIST1Q15672 202 aa16.43■□□□□ 0.22
PTPN18-202ENST00000347849 PCP2Q8IVA1 136 aa16.43■□□□□ 0.22
PTPN18-202ENST00000347849 IFI27L1Q96BM0 104 aa16.43■□□□□ 0.22
PTPN18-202ENST00000347849 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.42■□□□□ 0.222e-7■■■■■ 41.7
PTPN18-202ENST00000347849 IGKV2-40A0A087WW87 121 aaPredicted RBP16.42■□□□□ 0.22
PTPN18-202ENST00000347849 IGKV2D-40P01614 121 aaPredicted RBP16.42■□□□□ 0.22
PTPN18-202ENST00000347849 FER1L6-AS1Q8NA97 138 aa16.42■□□□□ 0.22
PTPN18-202ENST00000347849 CSPG4Q6UVK1 2322 aa16.42■□□□□ 0.22
PTPN18-202ENST00000347849 NPYP01303 97 aa16.42■□□□□ 0.22
PTPN18-202ENST00000347849 A0A0G2JLM5 398 aa16.41■□□□□ 0.22
PTPN18-202ENST00000347849 HSD52Q0P140 79 aa16.41■□□□□ 0.22
PTPN18-202ENST00000347849 ADAMTSL5Q6ZMM2 481 aa16.41■□□□□ 0.22
PTPN18-202ENST00000347849 DKK2Q9UBU2 259 aa16.41■□□□□ 0.22
PTPN18-202ENST00000347849 OR9G4Q8NGQ1 327 aa16.4■□□□□ 0.22
PTPN18-202ENST00000347849 TMEM190Q8WZ59 177 aa16.4■□□□□ 0.22
PTPN18-202ENST00000347849 ZNF502Q8TBZ5 544 aa16.4■□□□□ 0.22
PTPN18-202ENST00000347849 C18orf15Q96N68 181 aa16.4■□□□□ 0.22
PTPN18-202ENST00000347849 MOB4Q9Y3A3 225 aa16.4■□□□□ 0.22
PTPN18-202ENST00000347849 CLEC3BP05452 202 aa16.39■□□□□ 0.21
PTPN18-202ENST00000347849 RIPPLY3P57055 190 aa16.39■□□□□ 0.21
PTPN18-202ENST00000347849 A0A096LNT2 108 aa16.39■□□□□ 0.21
PTPN18-202ENST00000347849 H3BUX3 64 aa16.39■□□□□ 0.21
PTPN18-202ENST00000347849 PDE6HQ13956 83 aa16.39■□□□□ 0.21
PTPN18-202ENST00000347849 IGFL4Q6B9Z1 124 aa16.39■□□□□ 0.21
PTPN18-202ENST00000347849 Q8TAT8 98 aa16.39■□□□□ 0.21
PTPN18-202ENST00000347849 CCDC140Q96MF4 163 aa16.39■□□□□ 0.21
PTPN18-202ENST00000347849 B4DSR2 109 aa16.38■□□□□ 0.21
PTPN18-202ENST00000347849 K7EP34 96 aa16.38■□□□□ 0.21
PTPN18-202ENST00000347849 Q6ZS46 218 aa16.38■□□□□ 0.21
PTPN18-202ENST00000347849 OR2K2Q8NGT1 345 aa16.38■□□□□ 0.21
PTPN18-202ENST00000347849 PRR25Q96S07 402 aa16.38■□□□□ 0.21
PTPN18-202ENST00000347849 SIVA1O15304 175 aa16.38■□□□□ 0.21
PTPN18-202ENST00000347849 ZNF80P51504 273 aaPredicted RBP16.38■□□□□ 0.21
PTPN18-202ENST00000347849 OR4X2Q8NGF9 303 aa16.38■□□□□ 0.21
PTPN18-202ENST00000347849 MSRB1Q9NZV6 116 aa16.38■□□□□ 0.21
PTPN18-202ENST00000347849 TM4SF20Q53R12 229 aa16.37■□□□□ 0.21
PTPN18-202ENST00000347849 CLEC19AQ6UXS0 136 aa16.37■□□□□ 0.21
PTPN18-202ENST00000347849 VGLL1Q99990 258 aa16.36■□□□□ 0.21
PTPN18-202ENST00000347849 BLCAPP62952 87 aa16.36■□□□□ 0.21
PTPN18-202ENST00000347849 KLK9Q2XQG4 91 aa16.36■□□□□ 0.21
PTPN18-202ENST00000347849 KLK9Q9UKQ9 250 aa16.36■□□□□ 0.21
PTPN18-202ENST00000347849 ZNF469Q96JG9 3925 aaPredicted RBP16.35■□□□□ 0.21
PTPN18-202ENST00000347849 GAS8-AS1O95177 125 aa16.35■□□□□ 0.21
PTPN18-202ENST00000347849 C19orf54Q5BKX5 351 aa16.35■□□□□ 0.21
PTPN18-202ENST00000347849 S100A7AQ86SG5 101 aa16.35■□□□□ 0.21
PTPN18-202ENST00000347849 CHD6Q8TD26 2715 aa16.35■□□□□ 0.21
PTPN18-202ENST00000347849 TENM4Q6N022 2769 aa16.34■□□□□ 0.21
PTPN18-202ENST00000347849 NAV2Q8IVL1 2488 aa16.34■□□□□ 0.21
PTPN18-202ENST00000347849 TRAV41A0A0B4J266 112 aa16.34■□□□□ 0.21
PTPN18-202ENST00000347849 HLA-DMBP28068 263 aa16.34■□□□□ 0.21
PTPN18-202ENST00000347849 ORM1P02763 201 aa16.34■□□□□ 0.21
PTPN18-202ENST00000347849 DSCR9P59020 149 aa16.34■□□□□ 0.21
PTPN18-202ENST00000347849 ZNF575Q86XF7 245 aa16.34■□□□□ 0.21
PTPN18-202ENST00000347849 SPCS1Q9Y6A9 102 aa16.34■□□□□ 0.21
PTPN18-202ENST00000347849 SMAD5-AS1Q9Y6J3 95 aa16.34■□□□□ 0.21
PTPN18-202ENST00000347849 A0A1W2PPM0 123 aa16.33■□□□□ 0.2
PTPN18-202ENST00000347849 A6NDX4 124 aa16.33■□□□□ 0.2
PTPN18-202ENST00000347849 G3V4G9 280 aa16.33■□□□□ 0.2
PTPN18-202ENST00000347849 TTTY13Q9BZ97 58 aa16.33■□□□□ 0.2
PTPN18-202ENST00000347849 ZFAND3Q9H8U3 227 aa16.33■□□□□ 0.2
PTPN18-202ENST00000347849 SLC25A16P16260 332 aa16.33■□□□□ 0.2
PTPN18-202ENST00000347849 BMI1P35226 326 aa16.33■□□□□ 0.2
PTPN18-202ENST00000347849 LEPP41159 167 aa16.33■□□□□ 0.2
PTPN18-202ENST00000347849 IGHV3OR16-13A0A075B7E8 117 aa16.32■□□□□ 0.2
PTPN18-202ENST00000347849 IGHV3-74A0A0B4J1X5 117 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms