RNA–Protein interactions for RNA: ENST00000347662.8

TRAF3-201, Transcript of TNF receptor associated factor 3, humanhuman

TSL 5 BASIC

Gene TRAF3, Length 7,700 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-201ENST00000347662 TMEM178BH3BS89 294 aa9.52□□□□□ -0.89
TRAF3-201ENST00000347662 SPANXA1Q9NS26 97 aa9.52□□□□□ -0.89
TRAF3-201ENST00000347662 TRBV6-7A0A0A0MS04 114 aa9.52□□□□□ -0.89
TRAF3-201ENST00000347662 FOXE3Q13461 319 aa9.52□□□□□ -0.89
TRAF3-201ENST00000347662 LYZL4Q96KX0 146 aa9.52□□□□□ -0.89
TRAF3-201ENST00000347662 COX7B2Q8TF08 81 aa9.52□□□□□ -0.89
TRAF3-201ENST00000347662 RFNGQ9Y644 331 aa9.52□□□□□ -0.89
TRAF3-201ENST00000347662 TANC1Q9C0D5 1861 aa9.51□□□□□ -0.89
TRAF3-201ENST00000347662 CD200R1LQ6Q8B3 271 aa9.51□□□□□ -0.89
TRAF3-201ENST00000347662 VSIG2Q96IQ7 327 aa9.51□□□□□ -0.89
TRAF3-201ENST00000347662 IGLV10-54A0A075B6I4 117 aa9.51□□□□□ -0.89
TRAF3-201ENST00000347662 LINC01551Q86U37 167 aa9.51□□□□□ -0.89
TRAF3-201ENST00000347662 CAMK2N2Q96S95 79 aa9.51□□□□□ -0.89
TRAF3-201ENST00000347662 NDUFA12Q9UI09 145 aa9.51□□□□□ -0.89
TRAF3-201ENST00000347662 HIST1H2BKO60814 126 aa9.51□□□□□ -0.89
TRAF3-201ENST00000347662 HIST1H2BJP06899 126 aa9.51□□□□□ -0.89
TRAF3-201ENST00000347662 HIST1H2BOP23527 126 aa9.51□□□□□ -0.89
TRAF3-201ENST00000347662 HIST1H2BBP33778 126 aa9.51□□□□□ -0.89
TRAF3-201ENST00000347662 HIST1H2BDP58876 126 aa9.51□□□□□ -0.89
TRAF3-201ENST00000347662 HIST1H2BCP62807 126 aa9.51□□□□□ -0.89
TRAF3-201ENST00000347662 HIST2H2BEQ16778 126 aa9.51□□□□□ -0.89
TRAF3-201ENST00000347662 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.51□□□□□ -0.89
TRAF3-201ENST00000347662 HIST1H2BHQ93079 126 aa9.51□□□□□ -0.89
TRAF3-201ENST00000347662 HIST1H2BNQ99877 126 aa9.51□□□□□ -0.89
TRAF3-201ENST00000347662 HIST1H2BMQ99879 126 aa9.51□□□□□ -0.89
TRAF3-201ENST00000347662 KIAA1671Q9BY89 1806 aa9.5□□□□□ -0.89
TRAF3-201ENST00000347662 UBE2CO00762 179 aa9.5□□□□□ -0.89
TRAF3-201ENST00000347662 TSSC4Q9Y5U2 329 aaPredicted RBP9.5□□□□□ -0.89
TRAF3-201ENST00000347662 IGF2RP11717 2491 aa9.5□□□□□ -0.89
TRAF3-201ENST00000347662 M0R1W7 72 aa9.5□□□□□ -0.89
TRAF3-201ENST00000347662 SRSF3P84103 164 aaKnown RBP9.5□□□□□ -0.89
TRAF3-201ENST00000347662 IFITM3Q01628 133 aa9.5□□□□□ -0.89
TRAF3-201ENST00000347662 SIP14410 1827 aa9.5□□□□□ -0.89
TRAF3-201ENST00000347662 ETV2O00321 342 aaPredicted RBP9.5□□□□□ -0.89
TRAF3-201ENST00000347662 ANKHD1Q8IWZ3 2542 aaKnown RBP9.5□□□□□ -0.89
TRAF3-201ENST00000347662 CARHSP1Q9Y2V2 147 aaKnown RBP9.5□□□□□ -0.89
TRAF3-201ENST00000347662 NREPQ16612 68 aa9.5□□□□□ -0.89
TRAF3-201ENST00000347662 SHISA3A0PJX4 238 aa9.49□□□□□ -0.89
TRAF3-201ENST00000347662 MSMBP08118 114 aa9.49□□□□□ -0.89
TRAF3-201ENST00000347662 BRK1Q8WUW1 75 aa9.49□□□□□ -0.89
TRAF3-201ENST00000347662 TREML4Q6UXN2 200 aa9.49□□□□□ -0.89
TRAF3-201ENST00000347662 HIST1H2BLQ99880 126 aa9.49□□□□□ -0.89
TRAF3-201ENST00000347662 CENPFP49454 3210 aa9.49□□□□□ -0.89
TRAF3-201ENST00000347662 IGHV1OR15-1A0A075B7D0 117 aa9.49□□□□□ -0.89
TRAF3-201ENST00000347662 BAALC-AS2P0C853 105 aa9.49□□□□□ -0.89
TRAF3-201ENST00000347662 HERVK_113P63121 156 aa9.49□□□□□ -0.89
TRAF3-201ENST00000347662 MPLKIPQ8TAP9 179 aa9.49□□□□□ -0.89
TRAF3-201ENST00000347662 LMO1P25800 156 aa9.49□□□□□ -0.89
TRAF3-201ENST00000347662 IGKV1-9A0A0C4DH69 117 aa9.49□□□□□ -0.89
TRAF3-201ENST00000347662 COL8A2P25067 703 aa9.49□□□□□ -0.89
TRAF3-201ENST00000347662 MRPL36Q9P0J6 103 aaKnown RBP9.48□□□□□ -0.89
TRAF3-201ENST00000347662 C2orf16Q68DN1 1984 aa9.48□□□□□ -0.89
TRAF3-201ENST00000347662 A0A1B0GUS0 222 aa9.48□□□□□ -0.89
TRAF3-201ENST00000347662 PPDPFLQ8WWR9 84 aa9.48□□□□□ -0.89
TRAF3-201ENST00000347662 TRAV3A0A0B4J244 114 aa9.48□□□□□ -0.89
TRAF3-201ENST00000347662 UBE2V1Q13404 147 aa9.48□□□□□ -0.89
TRAF3-201ENST00000347662 GTSF1Q8WW33 167 aa9.48□□□□□ -0.89
TRAF3-201ENST00000347662 NCKAP5O14513 1909 aa9.48□□□□□ -0.89
TRAF3-201ENST00000347662 PLA2G2CQ5R387 149 aa9.48□□□□□ -0.89
TRAF3-201ENST00000347662 FBLN5Q9UBX5 448 aa9.48□□□□□ -0.89
TRAF3-201ENST00000347662 TMEM213A2RRL7 107 aa9.47□□□□□ -0.89
TRAF3-201ENST00000347662 E7EQL1 145 aa9.47□□□□□ -0.89
TRAF3-201ENST00000347662 H0YJW9 148 aa9.47□□□□□ -0.89
TRAF3-201ENST00000347662 FAM231BA6NCW3 169 aa9.47□□□□□ -0.89
TRAF3-201ENST00000347662 C5orf38Q86SI9 138 aa9.47□□□□□ -0.89
TRAF3-201ENST00000347662 TRAV4A0A0B4J268 109 aa9.47□□□□□ -0.89
TRAF3-201ENST00000347662 SLAQ13239 276 aa9.47□□□□□ -0.89
TRAF3-201ENST00000347662 IGHV4-59P01825 116 aa9.47□□□□□ -0.89
TRAF3-201ENST00000347662 CTSGP08311 255 aa9.47□□□□□ -0.89
TRAF3-201ENST00000347662 LAIR2Q6ISS4 152 aa9.47□□□□□ -0.89
TRAF3-201ENST00000347662 C2orf66Q6UXQ4 117 aa9.47□□□□□ -0.89
TRAF3-201ENST00000347662 CDKN1BP46527 198 aa9.46□□□□□ -0.89
TRAF3-201ENST00000347662 AGMATQ9BSE5 352 aa9.46□□□□□ -0.89
TRAF3-201ENST00000347662 IGKV3D-7A0A0C4DH55 119 aa9.46□□□□□ -0.89
TRAF3-201ENST00000347662 NCR3O14931 201 aa9.46□□□□□ -0.89
TRAF3-201ENST00000347662 C3orf79P0CE67 100 aa9.46□□□□□ -0.89
TRAF3-201ENST00000347662 CR1LQ2VPA4 569 aa9.46□□□□□ -0.89
TRAF3-201ENST00000347662 RNF138Q8WVD3 245 aa9.46□□□□□ -0.89
TRAF3-201ENST00000347662 EML6Q6ZMW3 1958 aa9.46□□□□□ -0.9
TRAF3-201ENST00000347662 SDHAF1A6NFY7 115 aa9.46□□□□□ -0.9
TRAF3-201ENST00000347662 OOSP1A8MZH6 123 aa9.46□□□□□ -0.9
TRAF3-201ENST00000347662 WIPF2Q8TF74 440 aaPredicted RBP9.46□□□□□ -0.9
TRAF3-201ENST00000347662 KLK5Q9Y337 293 aaPredicted RBP9.46□□□□□ -0.9
TRAF3-201ENST00000347662 ATP6V0E1O15342 81 aa9.46□□□□□ -0.9
TRAF3-201ENST00000347662 ZNF362Q5T0B9 420 aaPredicted RBP9.46□□□□□ -0.9
TRAF3-201ENST00000347662 GLRX5Q86SX6 157 aa9.46□□□□□ -0.9
TRAF3-201ENST00000347662 BVES-AS1Q5T3Y7 98 aa9.46□□□□□ -0.9
TRAF3-201ENST00000347662 ESM1Q9NQ30 184 aa9.46□□□□□ -0.9
TRAF3-201ENST00000347662 PRO1854Q9UHT4 67 aa9.46□□□□□ -0.9
TRAF3-201ENST00000347662 PCDH15Q96QU1 1955 aa9.46□□□□□ -0.9
TRAF3-201ENST00000347662 PSMB8P28062 276 aa9.45□□□□□ -0.9
TRAF3-201ENST00000347662 DLEU1O43261 78 aa9.45□□□□□ -0.9
TRAF3-201ENST00000347662 CXCL1P09341 107 aa9.45□□□□□ -0.9
TRAF3-201ENST00000347662 LYPD2Q6UXB3 125 aa9.45□□□□□ -0.9
TRAF3-201ENST00000347662 DENND4CQ5VZ89 1909 aa9.45□□□□□ -0.9
TRAF3-201ENST00000347662 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.45□□□□□ -0.9
TRAF3-201ENST00000347662 IGKV2-29A2NJV5 120 aaPredicted RBP9.45□□□□□ -0.9
TRAF3-201ENST00000347662 SRRM5B3KS81 715 aa9.45□□□□□ -0.9
TRAF3-201ENST00000347662 ATRAIDQ6UW56 229 aa9.45□□□□□ -0.9
TRAF3-201ENST00000347662 HEPN1Q6WQI6 88 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms