RNA–Protein interactions for RNA: ENST00000345436.8

CKLF-202, Transcript of chemokine like factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKLF, Length 571 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKLF-202ENST00000345436 HYLS1Q96M11 299 aa12.37□□□□□ -0.43
CKLF-202ENST00000345436 UPK3BQ9BT76 320 aa12.37□□□□□ -0.43
CKLF-202ENST00000345436 KLF12Q9Y4X4 402 aa12.37□□□□□ -0.43
CKLF-202ENST00000345436 PGPA6NDG6 321 aa12.36□□□□□ -0.43
CKLF-202ENST00000345436 DIRC3C9JPN6 131 aa12.36□□□□□ -0.43
CKLF-202ENST00000345436 PAX4O43316 350 aa12.36□□□□□ -0.43
CKLF-202ENST00000345436 ST6GAL2Q96JF0 529 aa12.36□□□□□ -0.43
CKLF-202ENST00000345436 SPXQ9BT56 116 aa12.36□□□□□ -0.43
CKLF-202ENST00000345436 PRO0255Q9UI72 69 aa12.36□□□□□ -0.43
CKLF-202ENST00000345436 MRPS16Q9Y3D3 137 aaKnown RBP12.36□□□□□ -0.43
CKLF-202ENST00000345436 TRGV11A0A075B6L2 103 aa12.35□□□□□ -0.43
CKLF-202ENST00000345436 ESRGQ1W209 222 aa12.35□□□□□ -0.43
CKLF-202ENST00000345436 Q8TAT8 98 aa12.35□□□□□ -0.43
CKLF-202ENST00000345436 MED28Q9H204 178 aa12.35□□□□□ -0.43
CKLF-202ENST00000345436 ICOSQ9Y6W8 199 aa12.35□□□□□ -0.43
CKLF-202ENST00000345436 NACAE9PAV3 2078 aa12.34□□□□□ -0.43
CKLF-202ENST00000345436 PTTG1O95997 202 aa12.34□□□□□ -0.43
CKLF-202ENST00000345436 MBP02144 154 aa12.34□□□□□ -0.43
CKLF-202ENST00000345436 OR10G4Q8NGN3 311 aa12.34□□□□□ -0.43
CKLF-202ENST00000345436 OR10G9Q8NGN4 311 aa12.34□□□□□ -0.43
CKLF-202ENST00000345436 OR10G7Q8NGN6 311 aa12.34□□□□□ -0.43
CKLF-202ENST00000345436 HHLA3Q9XRX5 114 aa12.34□□□□□ -0.43
CKLF-202ENST00000345436 K7EQM0 130 aa12.33□□□□□ -0.44
CKLF-202ENST00000345436 Q6AWC8 147 aa12.33□□□□□ -0.44
CKLF-202ENST00000345436 ASB13Q8WXK3 278 aa12.33□□□□□ -0.44
CKLF-202ENST00000345436 TP53TG3Q9ULZ0 132 aa12.33□□□□□ -0.44
CKLF-202ENST00000345436 ALG5Q9Y673 324 aa12.33□□□□□ -0.44
CKLF-202ENST00000345436 A0A096LPF7 62 aa12.32□□□□□ -0.44
CKLF-202ENST00000345436 TRGV4A0A0C4DH28 118 aa12.32□□□□□ -0.44
CKLF-202ENST00000345436 SERTM2A0A1B0GWG4 89 aa12.32□□□□□ -0.44
CKLF-202ENST00000345436 MRPL23Q16540 153 aaKnown RBP12.32□□□□□ -0.44
CKLF-202ENST00000345436 MUC21Q5SSG8 566 aa12.32□□□□□ -0.44
CKLF-202ENST00000345436 PRR9Q5T870 116 aa12.32□□□□□ -0.44
CKLF-202ENST00000345436 VSIG2Q96IQ7 327 aa12.32□□□□□ -0.44
CKLF-202ENST00000345436 NDFIP1Q9BT67 221 aa12.32□□□□□ -0.44
CKLF-202ENST00000345436 MRPL16Q9NX20 251 aaKnown RBP12.32□□□□□ -0.44
CKLF-202ENST00000345436 RPH3ALQ9UNE2 315 aa12.32□□□□□ -0.44
CKLF-202ENST00000345436 TRAV21A0A0B4J279 112 aa12.31□□□□□ -0.44
CKLF-202ENST00000345436 IGHV3-53P01767 116 aa12.31□□□□□ -0.44
CKLF-202ENST00000345436 SERF2P84101 59 aa12.31□□□□□ -0.44
CKLF-202ENST00000345436 TNP2Q05952 138 aa12.31□□□□□ -0.44
CKLF-202ENST00000345436 PCNPQ8WW12 178 aaKnown RBP12.31□□□□□ -0.44
CKLF-202ENST00000345436 WFDC1Q9HC57 220 aa12.31□□□□□ -0.44
CKLF-202ENST00000345436 C16orf90A8MZG2 172 aa12.3□□□□□ -0.44
CKLF-202ENST00000345436 CDC34P49427 236 aaPredicted RBP12.3□□□□□ -0.44
CKLF-202ENST00000345436 TMEM183BQ1AE95 376 aa12.3□□□□□ -0.44
CKLF-202ENST00000345436 GOLT1AQ6ZVE7 132 aa12.3□□□□□ -0.44
CKLF-202ENST00000345436 TMEM183AQ8IXX5 376 aa12.3□□□□□ -0.44
CKLF-202ENST00000345436 INO80EQ8NBZ0 244 aaPredicted RBP12.3□□□□□ -0.44
CKLF-202ENST00000345436 OR2G3Q8NGZ4 309 aa12.3□□□□□ -0.44
CKLF-202ENST00000345436 KCNS1Q96KK3 526 aa12.3□□□□□ -0.44
CKLF-202ENST00000345436 PSMG3Q9BT73 122 aaPredicted RBP12.3□□□□□ -0.44
CKLF-202ENST00000345436 TREM1Q9NP99 234 aa12.3□□□□□ -0.44
CKLF-202ENST00000345436 NAGKQ9UJ70 344 aa12.3□□□□□ -0.44
CKLF-202ENST00000345436 DNAH17Q9UFH2 4485 aa12.29□□□□□ -0.44
CKLF-202ENST00000345436 TRAV9-2A0A087WT02 112 aa12.29□□□□□ -0.44
CKLF-202ENST00000345436 SIVA1O15304 175 aa12.29□□□□□ -0.44
CKLF-202ENST00000345436 RAB2AP61019 212 aa12.29□□□□□ -0.44
CKLF-202ENST00000345436 TDRG1Q3Y452 100 aa12.29□□□□□ -0.44
CKLF-202ENST00000345436 IQCF2Q8IXL9 164 aa12.29□□□□□ -0.44
CKLF-202ENST00000345436 RASL10AQ92737 203 aa12.29□□□□□ -0.44
CKLF-202ENST00000345436 ORM1P02763 201 aa12.28□□□□□ -0.44
CKLF-202ENST00000345436 CRYBA4P53673 196 aa12.28□□□□□ -0.44
CKLF-202ENST00000345436 NEGR1Q7Z3B1 354 aa12.28□□□□□ -0.44
CKLF-202ENST00000345436 HSD17B11Q8NBQ5 300 aa12.28□□□□□ -0.44
CKLF-202ENST00000345436 C8orf49Q96NF6 230 aa12.28□□□□□ -0.44
CKLF-202ENST00000345436 AQP10Q96PS8 301 aa12.28□□□□□ -0.44
CKLF-202ENST00000345436 SDF2L1Q9HCN8 221 aa12.28□□□□□ -0.44
CKLF-202ENST00000345436 TMEM167BQ9NRX6 74 aa12.28□□□□□ -0.44
CKLF-202ENST00000345436 MDFICQ9P1T7 246 aa12.28□□□□□ -0.44
CKLF-202ENST00000345436 HERC2O95714 4834 aa12.28□□□□□ -0.44
CKLF-202ENST00000345436 BORCS7-ASMTA0A0B4J1R7 106 aa12.27□□□□□ -0.45
CKLF-202ENST00000345436 M0R2P5 195 aa12.27□□□□□ -0.45
CKLF-202ENST00000345436 FHL2Q14192 279 aa12.27□□□□□ -0.45
CKLF-202ENST00000345436 Q6ZQT7 251 aa12.27□□□□□ -0.45
CKLF-202ENST00000345436 ACTR3CQ9C0K3 210 aaPredicted RBP12.27□□□□□ -0.45
CKLF-202ENST00000345436 DNAH2Q9P225 4427 aa12.27□□□□□ -0.45
CKLF-202ENST00000345436 FBLL1A6NHQ2 334 aaKnown RBP12.26□□□□□ -0.45
CKLF-202ENST00000345436 HMGB3O15347 200 aaKnown RBP12.26□□□□□ -0.45
CKLF-202ENST00000345436 CXorf1O96002 111 aa12.26□□□□□ -0.45
CKLF-202ENST00000345436 STAG3L2P0CL84 134 aa12.26□□□□□ -0.45
CKLF-202ENST00000345436 STAG3L3P0CL85 134 aa12.26□□□□□ -0.45
CKLF-202ENST00000345436 ARL14EPLP0DKL9 152 aa12.26□□□□□ -0.45
CKLF-202ENST00000345436 SRIP30626 198 aa12.26□□□□□ -0.45
CKLF-202ENST00000345436 SH2D6Q7Z4S9 175 aa12.26□□□□□ -0.45
CKLF-202ENST00000345436 ZNF575Q86XF7 245 aa12.26□□□□□ -0.45
CKLF-202ENST00000345436 C5orf17Q8NAS9 161 aa12.26□□□□□ -0.45
CKLF-202ENST00000345436 OR4C5Q8NGB2 326 aa12.26□□□□□ -0.45
CKLF-202ENST00000345436 RAB24Q969Q5 203 aa12.26□□□□□ -0.45
CKLF-202ENST00000345436 TXNDC17Q9BRA2 123 aa12.26□□□□□ -0.45
CKLF-202ENST00000345436 TNFSF18Q9UNG2 199 aa12.26□□□□□ -0.45
CKLF-202ENST00000345436 K7EP13 123 aa12.25□□□□□ -0.45
CKLF-202ENST00000345436 EREGO14944 169 aa12.25□□□□□ -0.45
CKLF-202ENST00000345436 NXPH4O95158 308 aa12.25□□□□□ -0.45
CKLF-202ENST00000345436 GIPP09681 153 aaPredicted RBP12.25□□□□□ -0.45
CKLF-202ENST00000345436 ZFP69Q49AA0 526 aa12.25□□□□□ -0.45
CKLF-202ENST00000345436 FAT2Q9NYQ8 4349 aa12.25□□□□□ -0.45
CKLF-202ENST00000345436 TRAV4A0A0B4J268 109 aa12.24□□□□□ -0.45
CKLF-202ENST00000345436 C9JCJ5 164 aa12.24□□□□□ -0.45
CKLF-202ENST00000345436 TAAR5O14804 337 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms