RNA–Protein interactions for RNA: ENST00000340157.8

VRK2-201, Transcript of vaccinia related kinase 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK2, Length 1,888 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-201ENST00000340157 HIST1H2BDP58876 126 aa15.84■□□□□ 0.13
VRK2-201ENST00000340157 HIST1H2BCP62807 126 aa15.84■□□□□ 0.13
VRK2-201ENST00000340157 HIST2H2BEQ16778 126 aa15.84■□□□□ 0.13
VRK2-201ENST00000340157 HIST2H2BFQ5QNW6 126 aaPredicted RBP15.84■□□□□ 0.13
VRK2-201ENST00000340157 Q6ZQT7 251 aa15.84■□□□□ 0.13
VRK2-201ENST00000340157 HIST1H2BHQ93079 126 aa15.84■□□□□ 0.13
VRK2-201ENST00000340157 HIST1H2BNQ99877 126 aa15.84■□□□□ 0.13
VRK2-201ENST00000340157 HIST1H2BMQ99879 126 aa15.84■□□□□ 0.13
VRK2-201ENST00000340157 ZFAND2AQ8N6M9 145 aa15.84■□□□□ 0.13
VRK2-201ENST00000340157 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP15.84■□□□□ 0.13
VRK2-201ENST00000340157 LENEPQ9Y5L5 61 aa15.84■□□□□ 0.13
VRK2-201ENST00000340157 JMJD1CQ15652 2540 aa15.83■□□□□ 0.13
VRK2-201ENST00000340157 TENM1Q9UKZ4 2725 aa15.83■□□□□ 0.12
VRK2-201ENST00000340157 TRGC1P0CF51 173 aa15.83■□□□□ 0.12
VRK2-201ENST00000340157 SNRPD3P62318 126 aaKnown RBP15.83■□□□□ 0.12
VRK2-201ENST00000340157 FABP9Q0Z7S8 132 aa15.83■□□□□ 0.12
VRK2-201ENST00000340157 DYNLRB2Q8TF09 96 aa15.83■□□□□ 0.12
VRK2-201ENST00000340157 FAM231BA6NCW3 169 aa15.82■□□□□ 0.12
VRK2-201ENST00000340157 CD300EQ496F6 205 aaPredicted RBP15.82■□□□□ 0.12
VRK2-201ENST00000340157 PGLYRP4Q96LB8 373 aa15.82■□□□□ 0.12
VRK2-201ENST00000340157 C11orf21Q9P2W6 132 aa15.82■□□□□ 0.12
VRK2-201ENST00000340157 TRAPPC1Q9Y5R8 145 aa15.82■□□□□ 0.12
VRK2-201ENST00000340157 TMSB15BA0A087X1C1 80 aa15.82■□□□□ 0.12
VRK2-201ENST00000340157 FABP5P3A8MUU1 101 aa15.82■□□□□ 0.12
VRK2-201ENST00000340157 FOXA3P55318 350 aaPredicted RBP15.82■□□□□ 0.12
VRK2-201ENST00000340157 NDUFA11Q86Y39 141 aa15.82■□□□□ 0.12
VRK2-201ENST00000340157 TEP1Q99973 2627 aaKnown RBP15.81■□□□□ 0.12
VRK2-201ENST00000340157 TMEM189A5PLL7 270 aa15.81■□□□□ 0.12
VRK2-201ENST00000340157 CD33P20138 364 aa15.81■□□□□ 0.12
VRK2-201ENST00000340157 PAFAH1B2P68402 229 aa15.81■□□□□ 0.12
VRK2-201ENST00000340157 TMEM136Q6ZRR5 245 aa15.81■□□□□ 0.12
VRK2-201ENST00000340157 RBPMS2Q6ZRY4 209 aaKnown RBP15.81■□□□□ 0.12
VRK2-201ENST00000340157 A0A1B0GUS0 222 aa15.8■□□□□ 0.12
VRK2-201ENST00000340157 A0A1B0GXF2 115 aa15.8■□□□□ 0.12
VRK2-201ENST00000340157 KIR3DS1Q14943 382 aa15.8■□□□□ 0.12
VRK2-201ENST00000340157 SIGLEC8Q9NYZ4 499 aa15.8■□□□□ 0.12
VRK2-201ENST00000340157 TRAV2A0A0B4J234 112 aa15.8■□□□□ 0.12
VRK2-201ENST00000340157 A0A0J9YX75 114 aa15.8■□□□□ 0.12
VRK2-201ENST00000340157 SNURFLB1AK76 121 aa15.8■□□□□ 0.12
VRK2-201ENST00000340157 GNB1LQ9BYB4 327 aa15.8■□□□□ 0.12
VRK2-201ENST00000340157 CRISP2P16562 243 aa15.79■□□□□ 0.12
VRK2-201ENST00000340157 LINC01559Q495D7 138 aa15.79■□□□□ 0.12
VRK2-201ENST00000340157 APRG1Q8IVJ8 170 aa15.79■□□□□ 0.12
VRK2-201ENST00000340157 IGKV3D-20A0A0C4DH25 116 aa15.78■□□□□ 0.12
VRK2-201ENST00000340157 J3KRW8 73 aa15.78■□□□□ 0.12
VRK2-201ENST00000340157 MRPL18Q9H0U6 180 aaKnown RBP15.78■□□□□ 0.12
VRK2-201ENST00000340157 TRBV7-9A0A0J9YWB2 115 aa15.78■□□□□ 0.12
VRK2-201ENST00000340157 ATP5L2Q7Z4Y8 100 aa15.78■□□□□ 0.12
VRK2-201ENST00000340157 ZNF256Q9Y2P7 627 aaPredicted RBP15.78■□□□□ 0.12
VRK2-201ENST00000340157 C5orf52A6NGY3 159 aa15.77■□□□□ 0.11
VRK2-201ENST00000340157 ORM1P02763 201 aa15.77■□□□□ 0.11
VRK2-201ENST00000340157 SNRPEP62304 92 aaKnown RBP15.77■□□□□ 0.11
VRK2-201ENST00000340157 RASL11AQ6T310 242 aa15.77■□□□□ 0.11
VRK2-201ENST00000340157 SAV1Q9H4B6 383 aaPredicted RBP15.77■□□□□ 0.11
VRK2-201ENST00000340157 WDR73Q6P4I2 378 aa15.76■□□□□ 0.11
VRK2-201ENST00000340157 ARMS2P0C7Q2 107 aa15.76■□□□□ 0.11
VRK2-201ENST00000340157 DEFB131AP59861 70 aa15.76■□□□□ 0.11
VRK2-201ENST00000340157 KLLNB2CW77 178 aa15.75■□□□□ 0.11
VRK2-201ENST00000340157 IGLC6P0CF74 106 aa15.75■□□□□ 0.11
VRK2-201ENST00000340157 CAMPP49913 170 aa15.75■□□□□ 0.11
VRK2-201ENST00000340157 PRR31Q5SQ13 230 aa15.75■□□□□ 0.11
VRK2-201ENST00000340157 FOXI2Q6ZQN5 318 aa15.75■□□□□ 0.11
VRK2-201ENST00000340157 SPAG8Q99932 426 aaPredicted RBP15.75■□□□□ 0.11
VRK2-201ENST00000340157 ATRQ13535 2644 aa15.74■□□□□ 0.11
VRK2-201ENST00000340157 TRAV25A0A0B4J276 109 aa15.74■□□□□ 0.11
VRK2-201ENST00000340157 GRIFINA4D1Z8 144 aa15.74■□□□□ 0.11
VRK2-201ENST00000340157 S100A6P06703 90 aa15.74■□□□□ 0.11
VRK2-201ENST00000340157 RPS20P60866 119 aaKnown RBP15.74■□□□□ 0.11
VRK2-201ENST00000340157 RAB4BP61018 213 aa15.74■□□□□ 0.11
VRK2-201ENST00000340157 ZNF124Q15973 351 aa15.74■□□□□ 0.11
VRK2-201ENST00000340157 COX19Q49B96 90 aa15.74■□□□□ 0.11
VRK2-201ENST00000340157 VWFP04275 2813 aa15.74■□□□□ 0.11
VRK2-201ENST00000340157 XKRY2A2RUG3 117 aa15.74■□□□□ 0.11
VRK2-201ENST00000340157 MT-ND6P03923 174 aa15.74■□□□□ 0.11
VRK2-201ENST00000340157 GPX1P07203 203 aa15.74■□□□□ 0.11
VRK2-201ENST00000340157 NDUFA6P56556 154 aa15.74■□□□□ 0.11
VRK2-201ENST00000340157 HBBP68871 147 aa15.74■□□□□ 0.11
VRK2-201ENST00000340157 SLAQ13239 276 aa15.74■□□□□ 0.11
VRK2-201ENST00000340157 Q6AWC8 147 aa15.74■□□□□ 0.11
VRK2-201ENST00000340157 EBLN2Q6P2I7 272 aa15.74■□□□□ 0.11
VRK2-201ENST00000340157 LYZL1Q6UWQ5 148 aa15.74■□□□□ 0.11
VRK2-201ENST00000340157 TPPP3Q9BW30 176 aa15.74■□□□□ 0.11
VRK2-201ENST00000340157 MAP6D1Q9H9H5 199 aa15.74■□□□□ 0.11
VRK2-201ENST00000340157 KNCNA6PVL3 124 aa15.73■□□□□ 0.11
VRK2-201ENST00000340157 IGKV3-20P01619 116 aa15.73■□□□□ 0.11
VRK2-201ENST00000340157 HLA-DQA1P01909 254 aa15.73■□□□□ 0.11
VRK2-201ENST00000340157 RNASE4P34096 147 aaKnown RBP15.73■□□□□ 0.11
VRK2-201ENST00000340157 ODF3Q96PU9 254 aa15.73■□□□□ 0.11
VRK2-201ENST00000340157 A0A1B0GUT8 65 aa15.72■□□□□ 0.11
VRK2-201ENST00000340157 SAP30O75446 220 aa15.72■□□□□ 0.11
VRK2-201ENST00000340157 CTRLP40313 264 aa15.72■□□□□ 0.11
VRK2-201ENST00000340157 AMTNQ6UX39 209 aa15.72■□□□□ 0.11
VRK2-201ENST00000340157 SSBP4Q9BWG4 385 aaPredicted RBP15.72■□□□□ 0.11
VRK2-201ENST00000340157 LINC00482Q8N8I6 264 aa15.71■□□□□ 0.11
VRK2-201ENST00000340157 CITED1Q99966 193 aa15.71■□□□□ 0.11
VRK2-201ENST00000340157 TRAV21A0A0B4J279 112 aa15.71■□□□□ 0.11
VRK2-201ENST00000340157 OR4C46A6NHA9 309 aa15.71■□□□□ 0.11
VRK2-201ENST00000340157 KIAA1644Q3SXP7 199 aa15.71■□□□□ 0.11
VRK2-201ENST00000340157 FER1L6-AS1Q8NA97 138 aa15.71■□□□□ 0.11
VRK2-201ENST00000340157 MUC21A0A0G2JKD1 596 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms