RNA–Protein interactions for RNA: ENST00000334859.8

LRCH3-201, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LRCH3, Length 2,258 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-201ENST00000334859 UNQ9165/PRO28630Q6UXU0 137 aa13.56□□□□□ -0.24
LRCH3-201ENST00000334859 ATP6V0BQ99437 205 aa13.56□□□□□ -0.24
LRCH3-201ENST00000334859 IGHV4-30-2A0A087WSY4 118 aa13.55□□□□□ -0.24
LRCH3-201ENST00000334859 GAS8-AS1O95177 125 aa13.55□□□□□ -0.24
LRCH3-201ENST00000334859 PPBPP02775 128 aa13.55□□□□□ -0.24
LRCH3-201ENST00000334859 EVI2AP22794 236 aa13.55□□□□□ -0.24
LRCH3-201ENST00000334859 FOXE3Q13461 319 aa13.55□□□□□ -0.24
LRCH3-201ENST00000334859 ZNF738Q8NE65 137 aa13.55□□□□□ -0.24
LRCH3-201ENST00000334859 GLMPQ8WWB7 406 aa13.55□□□□□ -0.24
LRCH3-201ENST00000334859 IGSF10Q6WRI0 2623 aa13.55□□□□□ -0.24
LRCH3-201ENST00000334859 DOPEY1Q5JWR5 2465 aa13.55□□□□□ -0.24
LRCH3-201ENST00000334859 USP9XQ93008 2570 aaPredicted RBP13.55□□□□□ -0.24
LRCH3-201ENST00000334859 NUDT3O95989 172 aa13.55□□□□□ -0.24
LRCH3-201ENST00000334859 IGHV3-11P01762 117 aa13.55□□□□□ -0.24
LRCH3-201ENST00000334859 CACNG7P62955 275 aa13.55□□□□□ -0.24
LRCH3-201ENST00000334859 C9orf47Q6ZRZ4 202 aa13.55□□□□□ -0.24
LRCH3-201ENST00000334859 MEGF9Q9H1U4 602 aa13.55□□□□□ -0.24
LRCH3-201ENST00000334859 HIF1ANQ9NWT6 349 aa13.55□□□□□ -0.24
LRCH3-201ENST00000334859 CACNA1AO00555 2505 aa13.54□□□□□ -0.24
LRCH3-201ENST00000334859 C9orf139Q6ZV77 190 aa13.54□□□□□ -0.24
LRCH3-201ENST00000334859 NDUFS8O00217 210 aa13.53□□□□□ -0.24
LRCH3-201ENST00000334859 SMAD7O15105 426 aaKnown RBP13.53□□□□□ -0.24
LRCH3-201ENST00000334859 IGF1P05019 195 aa13.53□□□□□ -0.24
LRCH3-201ENST00000334859 UTP20O75691 2785 aaKnown RBP13.53□□□□□ -0.24
LRCH3-201ENST00000334859 TNFRSF6BO95407 300 aa13.53□□□□□ -0.24
LRCH3-201ENST00000334859 Q6ZQT7 251 aa13.53□□□□□ -0.24
LRCH3-201ENST00000334859 WFDC3Q8IUB2 231 aa13.53□□□□□ -0.24
LRCH3-201ENST00000334859 ORAOV1Q8WV07 137 aa13.53□□□□□ -0.24
LRCH3-201ENST00000334859 IFI27L1Q96BM0 104 aa13.53□□□□□ -0.24
LRCH3-201ENST00000334859 COX11Q9Y6N1 276 aa13.53□□□□□ -0.24
LRCH3-201ENST00000334859 MYO18BQ8IUG5 2567 aa13.53□□□□□ -0.24
LRCH3-201ENST00000334859 CRYBG3Q68DQ2 2970 aa13.53□□□□□ -0.24
LRCH3-201ENST00000334859 J3KRW8 73 aa13.52□□□□□ -0.24
LRCH3-201ENST00000334859 PF4V1P10720 104 aa13.52□□□□□ -0.24
LRCH3-201ENST00000334859 GATA1P15976 413 aaPredicted RBP13.52□□□□□ -0.24
LRCH3-201ENST00000334859 LGALS9BQ3B8N2 356 aa13.52□□□□□ -0.24
LRCH3-201ENST00000334859 LGALS9CQ6DKI2 356 aa13.52□□□□□ -0.24
LRCH3-201ENST00000334859 C20orf173Q96LM9 149 aa13.52□□□□□ -0.24
LRCH3-201ENST00000334859 UFC1Q9Y3C8 167 aa13.52□□□□□ -0.24
LRCH3-201ENST00000334859 SNAI2O43623 268 aa13.52□□□□□ -0.25
LRCH3-201ENST00000334859 COX8AP10176 69 aa13.52□□□□□ -0.25
LRCH3-201ENST00000334859 C18orf15Q96N68 181 aa13.52□□□□□ -0.25
LRCH3-201ENST00000334859 NDUFA4O00483 81 aa13.51□□□□□ -0.25
LRCH3-201ENST00000334859 IGHG2P01859 326 aa13.51□□□□□ -0.25
LRCH3-201ENST00000334859 MSMBP08118 114 aa13.51□□□□□ -0.25
LRCH3-201ENST00000334859 TCTAP57738 103 aa13.51□□□□□ -0.25
LRCH3-201ENST00000334859 RPL11P62913 178 aaKnown RBP13.51□□□□□ -0.25
LRCH3-201ENST00000334859 SMIM15Q7Z3B0 74 aa13.51□□□□□ -0.25
LRCH3-201ENST00000334859 KLK15Q9H2R5 256 aa13.51□□□□□ -0.25
LRCH3-201ENST00000334859 BLCAPP62952 87 aa13.51□□□□□ -0.25
LRCH3-201ENST00000334859 PRR9Q5T870 116 aa13.51□□□□□ -0.25
LRCH3-201ENST00000334859 LCNL1Q6ZST4 164 aa13.51□□□□□ -0.25
LRCH3-201ENST00000334859 IGHV7-4-1A0A0J9YVY3 117 aa13.5□□□□□ -0.25
LRCH3-201ENST00000334859 A6NDX4 124 aa13.5□□□□□ -0.25
LRCH3-201ENST00000334859 LEPP41159 167 aa13.5□□□□□ -0.25
LRCH3-201ENST00000334859 ANKRD39Q53RE8 183 aa13.5□□□□□ -0.25
LRCH3-201ENST00000334859 BVES-AS1Q5T3Y7 98 aa13.5□□□□□ -0.25
LRCH3-201ENST00000334859 C12orf54Q6X4T0 127 aa13.5□□□□□ -0.25
LRCH3-201ENST00000334859 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.5□□□□□ -0.257e-7■■■□□ 18.9
LRCH3-201ENST00000334859 H3BVH4 76 aa13.5□□□□□ -0.25
LRCH3-201ENST00000334859 SPANXN1Q5VSR9 72 aa13.5□□□□□ -0.25
LRCH3-201ENST00000334859 USMG5Q96IX5 58 aa13.5□□□□□ -0.25
LRCH3-201ENST00000334859 NXT2Q9NPJ8 142 aaKnown RBP13.5□□□□□ -0.25
LRCH3-201ENST00000334859 Q6ZS46 218 aa13.49□□□□□ -0.25
LRCH3-201ENST00000334859 GPHB5Q86YW7 130 aa13.49□□□□□ -0.25
LRCH3-201ENST00000334859 OR10J6PQ8NGY7 276 aa13.49□□□□□ -0.25
LRCH3-201ENST00000334859 IGKV3-7A0A075B6H7 116 aa13.48□□□□□ -0.25
LRCH3-201ENST00000334859 OR4X2Q8NGF9 303 aa13.48□□□□□ -0.25
LRCH3-201ENST00000334859 NPFFR1Q9GZQ6 430 aa13.48□□□□□ -0.25
LRCH3-201ENST00000334859 TRAV26-2A0A0B4J265 109 aa13.48□□□□□ -0.25
LRCH3-201ENST00000334859 H3BUA1 57 aa13.48□□□□□ -0.25
LRCH3-201ENST00000334859 DEFB1P60022 68 aa13.48□□□□□ -0.25
LRCH3-201ENST00000334859 PPP1R14DQ9NXH3 145 aa13.47□□□□□ -0.25
LRCH3-201ENST00000334859 SELENOKQ9Y6D0 94 aa13.47□□□□□ -0.25
LRCH3-201ENST00000334859 PTTG1IPP53801 180 aa13.47□□□□□ -0.25
LRCH3-201ENST00000334859 C2orf91Q6ZV80 131 aa13.47□□□□□ -0.25
LRCH3-201ENST00000334859 OR2K2Q8NGT1 345 aa13.47□□□□□ -0.25
LRCH3-201ENST00000334859 FCER1GP30273 86 aa13.46□□□□□ -0.25
LRCH3-201ENST00000334859 ERASQ7Z444 233 aa13.46□□□□□ -0.25
LRCH3-201ENST00000334859 DPF1Q92782 380 aa13.46□□□□□ -0.25
LRCH3-201ENST00000334859 DKK2Q9UBU2 259 aa13.46□□□□□ -0.25
LRCH3-201ENST00000334859 LENEPQ9Y5L5 61 aa13.46□□□□□ -0.25
LRCH3-201ENST00000334859 LINC00477Q96M19 166 aa13.46□□□□□ -0.26
LRCH3-201ENST00000334859 CSPG4Q6UVK1 2322 aa13.46□□□□□ -0.26
LRCH3-201ENST00000334859 ACACBO00763 2458 aa13.45□□□□□ -0.26
LRCH3-201ENST00000334859 LINC01546A6NGU7 62 aa13.45□□□□□ -0.26
LRCH3-201ENST00000334859 SOCS3O14543 225 aa13.45□□□□□ -0.26
LRCH3-201ENST00000334859 OVOL1O14753 267 aa13.45□□□□□ -0.26
LRCH3-201ENST00000334859 CCL25O15444 150 aa13.45□□□□□ -0.26
LRCH3-201ENST00000334859 OR1N2Q8NGR9 330 aa13.45□□□□□ -0.26
LRCH3-201ENST00000334859 NRGNQ92686 78 aa13.45□□□□□ -0.26
LRCH3-201ENST00000334859 AVPP01185 164 aa13.44□□□□□ -0.26
LRCH3-201ENST00000334859 FGF6P10767 208 aa13.44□□□□□ -0.26
LRCH3-201ENST00000334859 ZFAND2AQ8N6M9 145 aa13.44□□□□□ -0.26
LRCH3-201ENST00000334859 Q8N8P6 123 aa13.44□□□□□ -0.26
LRCH3-201ENST00000334859 TMEM158Q8WZ71 300 aa13.44□□□□□ -0.26
LRCH3-201ENST00000334859 B4DSR2 109 aa13.44□□□□□ -0.26
LRCH3-201ENST00000334859 F6UB75 175 aa13.44□□□□□ -0.26
LRCH3-201ENST00000334859 BRI3O95415 125 aa13.44□□□□□ -0.26
LRCH3-201ENST00000334859 TM4SF20Q53R12 229 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms