RNA–Protein interactions for RNA: ENST00000334690.10

TRAPPC11-201, Transcript of trafficking protein particle complex 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-201ENST00000334690 SDHAF1A6NFY7 115 aa13.51□□□□□ -0.25
TRAPPC11-201ENST00000334690 PMVKQ15126 192 aa13.51□□□□□ -0.25
TRAPPC11-201ENST00000334690 ANXA2RQ3ZCQ2 193 aa13.51□□□□□ -0.25
TRAPPC11-201ENST00000334690 IGHV1OR15-1A0A075B7D0 117 aa13.5□□□□□ -0.25
TRAPPC11-201ENST00000334690 CKS1BP61024 79 aa13.5□□□□□ -0.25
TRAPPC11-201ENST00000334690 RNF223E7ERA6 249 aa13.5□□□□□ -0.25
TRAPPC11-201ENST00000334690 IGHV3-53P01767 116 aa13.5□□□□□ -0.25
TRAPPC11-201ENST00000334690 SPXQ9BT56 116 aa13.5□□□□□ -0.25
TRAPPC11-201ENST00000334690 SPRNQ5BIV9 151 aa13.5□□□□□ -0.25
TRAPPC11-201ENST00000334690 NEGR1Q7Z3B1 354 aa13.5□□□□□ -0.25
TRAPPC11-201ENST00000334690 DPH3Q96FX2 82 aa13.5□□□□□ -0.25
TRAPPC11-201ENST00000334690 LENEPQ9Y5L5 61 aa13.5□□□□□ -0.25
TRAPPC11-201ENST00000334690 CDKN1BP46527 198 aa13.49□□□□□ -0.25
TRAPPC11-201ENST00000334690 KLF5Q13887 457 aaPredicted RBP13.49□□□□□ -0.25
TRAPPC11-201ENST00000334690 WNK1Q9H4A3 2382 aa13.49□□□□□ -0.25
TRAPPC11-201ENST00000334690 H3BUA1 57 aa13.49□□□□□ -0.25
TRAPPC11-201ENST00000334690 J3QLI3 93 aa13.49□□□□□ -0.25
TRAPPC11-201ENST00000334690 PRIMA1Q86XR5 153 aa13.49□□□□□ -0.25
TRAPPC11-201ENST00000334690 F8VRH5 84 aa13.48□□□□□ -0.25
TRAPPC11-201ENST00000334690 PAX4O43316 350 aa13.48□□□□□ -0.25
TRAPPC11-201ENST00000334690 IGKV1-17P01599 117 aa13.48□□□□□ -0.25
TRAPPC11-201ENST00000334690 C17orf77Q96MU5 243 aa13.48□□□□□ -0.25
TRAPPC11-201ENST00000334690 TRAV13-1A0A0B4J241 112 aa13.48□□□□□ -0.25
TRAPPC11-201ENST00000334690 TNCP24821 2201 aa13.48□□□□□ -0.25
TRAPPC11-201ENST00000334690 LTBP2Q14767 1821 aa13.48□□□□□ -0.25
TRAPPC11-201ENST00000334690 GAGE2BQ13066 116 aa13.47□□□□□ -0.25
TRAPPC11-201ENST00000334690 GAGE2EQ4V326 116 aa13.47□□□□□ -0.25
TRAPPC11-201ENST00000334690 PHLDA1Q8WV24 401 aaPredicted RBP13.47□□□□□ -0.25
TRAPPC11-201ENST00000334690 MRPL53Q96EL3 112 aaKnown RBP13.47□□□□□ -0.25
TRAPPC11-201ENST00000334690 GAGE2DQ9UEU5 116 aa13.47□□□□□ -0.25
TRAPPC11-201ENST00000334690 RPL35AP18077 110 aaKnown RBP13.47□□□□□ -0.25
TRAPPC11-201ENST00000334690 C20orf78Q9BR46 151 aa13.47□□□□□ -0.25
TRAPPC11-201ENST00000334690 PRR14LQ5THK1 2151 aa13.47□□□□□ -0.25
TRAPPC11-201ENST00000334690 I3L3M4 83 aa13.47□□□□□ -0.25
TRAPPC11-201ENST00000334690 C6orf226Q5I0X4 101 aa13.47□□□□□ -0.25
TRAPPC11-201ENST00000334690 TCTEX1D4Q5JR98 221 aa13.47□□□□□ -0.25
TRAPPC11-201ENST00000334690 SP5Q6BEB4 398 aaPredicted RBP13.47□□□□□ -0.25
TRAPPC11-201ENST00000334690 MRPL35Q9NZE8 188 aaKnown RBP13.47□□□□□ -0.25
TRAPPC11-201ENST00000334690 IGHV7-4-1A0A0J9YVY3 117 aa13.46□□□□□ -0.25
TRAPPC11-201ENST00000334690 GP9P14770 177 aa13.46□□□□□ -0.25
TRAPPC11-201ENST00000334690 NPC2P61916 151 aa13.46□□□□□ -0.25
TRAPPC11-201ENST00000334690 INS-IGF2F8WCM5 200 aa13.46□□□□□ -0.25
TRAPPC11-201ENST00000334690 C2orf82Q6UX34 121 aa13.46□□□□□ -0.25
TRAPPC11-201ENST00000334690 ZNF747Q9BV97 191 aa13.46□□□□□ -0.25
TRAPPC11-201ENST00000334690 AGPAT4-IT1Q9H0P7 198 aa13.46□□□□□ -0.25
TRAPPC11-201ENST00000334690 OTOGLQ3ZCN5 2332 aa13.46□□□□□ -0.26
TRAPPC11-201ENST00000334690 DYSFO75923 2080 aa13.46□□□□□ -0.26
TRAPPC11-201ENST00000334690 LINC01619G3V211 115 aa13.46□□□□□ -0.26
TRAPPC11-201ENST00000334690 K7EIM0 57 aa13.46□□□□□ -0.26
TRAPPC11-201ENST00000334690 S100A7L2Q5SY68 101 aa13.46□□□□□ -0.26
TRAPPC11-201ENST00000334690 ANAPC13Q9BS18 74 aa13.46□□□□□ -0.26
TRAPPC11-201ENST00000334690 RBAKDNA6NC62 111 aa13.45□□□□□ -0.26
TRAPPC11-201ENST00000334690 C9orf118A6NHY6 69 aa13.45□□□□□ -0.26
TRAPPC11-201ENST00000334690 KNCNA6PVL3 124 aa13.45□□□□□ -0.26
TRAPPC11-201ENST00000334690 I3L2K1 104 aa13.45□□□□□ -0.26
TRAPPC11-201ENST00000334690 IGLV2-14P01704 120 aa13.45□□□□□ -0.26
TRAPPC11-201ENST00000334690 ELANEP08246 267 aa13.45□□□□□ -0.26
TRAPPC11-201ENST00000334690 SRSF2Q01130 221 aaKnown RBP13.45□□□□□ -0.26
TRAPPC11-201ENST00000334690 CR1LQ2VPA4 569 aa13.45□□□□□ -0.26
TRAPPC11-201ENST00000334690 PATE2Q6UY27 113 aa13.45□□□□□ -0.26
TRAPPC11-201ENST00000334690 C11orf1Q9H5F2 150 aa13.45□□□□□ -0.26
TRAPPC11-201ENST00000334690 PCDH15Q96QU1 1955 aa13.45□□□□□ -0.26
TRAPPC11-201ENST00000334690 FAM120AOSQ5T036 256 aa13.45□□□□□ -0.26
TRAPPC11-201ENST00000334690 ASPHD1Q5U4P2 390 aa13.45□□□□□ -0.26
TRAPPC11-201ENST00000334690 KIR2DL5BA0A0G2JN68 375 aa13.45□□□□□ -0.26
TRAPPC11-201ENST00000334690 KIR2DL5BA0A0G2JPC4 375 aa13.45□□□□□ -0.26
TRAPPC11-201ENST00000334690 A0A1W2PNU3 283 aaPredicted RBP13.45□□□□□ -0.26
TRAPPC11-201ENST00000334690 HLA-DRB4P13762 266 aa13.45□□□□□ -0.26
TRAPPC11-201ENST00000334690 KIR2DL5AQ8N109 375 aa13.45□□□□□ -0.26
TRAPPC11-201ENST00000334690 JPT2Q9H910 190 aa13.45□□□□□ -0.26
TRAPPC11-201ENST00000334690 XCL2Q9UBD3 114 aa13.45□□□□□ -0.26
TRAPPC11-201ENST00000334690 RNF114Q9Y508 228 aa13.45□□□□□ -0.26
TRAPPC11-201ENST00000334690 HLA-DRB4X5D2U9 266 aa13.45□□□□□ -0.26
TRAPPC11-201ENST00000334690 EGR2P11161 476 aaPredicted RBP13.44□□□□□ -0.26
TRAPPC11-201ENST00000334690 NDUFS7O75251 213 aa13.44□□□□□ -0.26
TRAPPC11-201ENST00000334690 CHD3Q12873 2000 aaKnown RBP13.44□□□□□ -0.26
TRAPPC11-201ENST00000334690 TRAV26-2A0A0B4J265 109 aa13.44□□□□□ -0.26
TRAPPC11-201ENST00000334690 Q5PR19 223 aa13.44□□□□□ -0.26
TRAPPC11-201ENST00000334690 ADAMTSL5Q6ZMM2 481 aa13.44□□□□□ -0.26
TRAPPC11-201ENST00000334690 DYNAPQ8N1N2 210 aa13.44□□□□□ -0.26
TRAPPC11-201ENST00000334690 PRSS33Q8NF86 280 aa13.44□□□□□ -0.26
TRAPPC11-201ENST00000334690 NPBQ8NG41 125 aa13.44□□□□□ -0.26
TRAPPC11-201ENST00000334690 TRBV20-1A0A075B6N2 111 aa13.44□□□□□ -0.26
TRAPPC11-201ENST00000334690 GRNP28799 593 aaKnown RBP13.44□□□□□ -0.26
TRAPPC11-201ENST00000334690 FAM167A-AS1Q96KT0 104 aa13.44□□□□□ -0.26
TRAPPC11-201ENST00000334690 KLK9Q9UKQ9 250 aa13.44□□□□□ -0.26
TRAPPC11-201ENST00000334690 CENPVL3A0A0U1RRI6 287 aa13.43□□□□□ -0.26
TRAPPC11-201ENST00000334690 LEPROTO15243 131 aa13.43□□□□□ -0.26
TRAPPC11-201ENST00000334690 SEM1Q6ZVN7 128 aa13.43□□□□□ -0.26
TRAPPC11-201ENST00000334690 CST9LQ9H4G1 147 aa13.43□□□□□ -0.26
TRAPPC11-201ENST00000334690 MYO18BQ8IUG5 2567 aa13.43□□□□□ -0.26
TRAPPC11-201ENST00000334690 COL4A4P53420 1690 aaPredicted RBP13.43□□□□□ -0.26
TRAPPC11-201ENST00000334690 HOXB4P17483 251 aaPredicted RBP13.43□□□□□ -0.26
TRAPPC11-201ENST00000334690 GAGE1Q13065 139 aa13.43□□□□□ -0.26
TRAPPC11-201ENST00000334690 ATP6V0BQ99437 205 aa13.43□□□□□ -0.26
TRAPPC11-201ENST00000334690 K7EMI3 77 aa13.42□□□□□ -0.26
TRAPPC11-201ENST00000334690 SIVA1O15304 175 aa13.42□□□□□ -0.26
TRAPPC11-201ENST00000334690 IGLV11-55A0A075B6I3 123 aa13.42□□□□□ -0.26
TRAPPC11-201ENST00000334690 TAL2Q16559 108 aa13.42□□□□□ -0.26
TRAPPC11-201ENST00000334690 OCIAD2Q56VL3 154 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms