RNA–Protein interactions for RNA: ENST00000321442.9

SFXN1-201, Transcript of sideroflexin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SFXN1, Length 4,231 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-201ENST00000321442 MRPL36Q9P0J6 103 aaKnown RBP13.04□□□□□ -0.32
SFXN1-201ENST00000321442 NRGNQ92686 78 aa13.04□□□□□ -0.32
SFXN1-201ENST00000321442 LRP4O75096 1905 aa13.03□□□□□ -0.32
SFXN1-201ENST00000321442 TRAV21A0A0B4J279 112 aa13.03□□□□□ -0.32
SFXN1-201ENST00000321442 ANKRD39Q53RE8 183 aa13.03□□□□□ -0.32
SFXN1-201ENST00000321442 SPOCK3Q9BQ16 436 aa13.03□□□□□ -0.32
SFXN1-201ENST00000321442 DSCAMO60469 2012 aa13.03□□□□□ -0.32
SFXN1-201ENST00000321442 MRAP2Q96G30 205 aa13.03□□□□□ -0.32
SFXN1-201ENST00000321442 TRAV26-2A0A0B4J265 109 aa13.03□□□□□ -0.32
SFXN1-201ENST00000321442 TP53TG3Q9ULZ0 132 aa13.03□□□□□ -0.32
SFXN1-201ENST00000321442 PPP1R17O96001 155 aa13.02□□□□□ -0.32
SFXN1-201ENST00000321442 DYNLRB2Q8TF09 96 aa13.02□□□□□ -0.32
SFXN1-201ENST00000321442 DDB2Q92466 427 aa13.02□□□□□ -0.32
SFXN1-201ENST00000321442 TTTY13Q9BZ97 58 aa13.02□□□□□ -0.32
SFXN1-201ENST00000321442 NDUFB8O95169 186 aa13.02□□□□□ -0.32
SFXN1-201ENST00000321442 P0C879 139 aa13.02□□□□□ -0.32
SFXN1-201ENST00000321442 PRTN3P24158 256 aa13.02□□□□□ -0.32
SFXN1-201ENST00000321442 MEIG1Q5JSS6 88 aa13.02□□□□□ -0.32
SFXN1-201ENST00000321442 VMO1Q7Z5L0 202 aa13.02□□□□□ -0.32
SFXN1-201ENST00000321442 WIPF2Q8TF74 440 aaPredicted RBP13.02□□□□□ -0.32
SFXN1-201ENST00000321442 GTSF1Q8WW33 167 aa13.02□□□□□ -0.32
SFXN1-201ENST00000321442 HLA-DMBP28068 263 aa13.02□□□□□ -0.33
SFXN1-201ENST00000321442 PRR25Q96S07 402 aa13.02□□□□□ -0.33
SFXN1-201ENST00000321442 TSSC4Q9Y5U2 329 aaPredicted RBP13.02□□□□□ -0.33
SFXN1-201ENST00000321442 HECTD1Q9ULT8 2610 aa13.02□□□□□ -0.33
SFXN1-201ENST00000321442 K7EMI3 77 aa13.02□□□□□ -0.33
SFXN1-201ENST00000321442 CDKN1BP46527 198 aa13.01□□□□□ -0.33
SFXN1-201ENST00000321442 KLF5Q13887 457 aaPredicted RBP13.01□□□□□ -0.33
SFXN1-201ENST00000321442 A8MWV9 139 aa13.01□□□□□ -0.33
SFXN1-201ENST00000321442 C22orf46C9J442 243 aa13.01□□□□□ -0.33
SFXN1-201ENST00000321442 SUMO2P61956 95 aaKnown RBP13.01□□□□□ -0.33
SFXN1-201ENST00000321442 PAX8Q06710 450 aa13.01□□□□□ -0.33
SFXN1-201ENST00000321442 IGF2BP2-AS1Q96M15 143 aa13.01□□□□□ -0.33
SFXN1-201ENST00000321442 MRPL35Q9NZE8 188 aaKnown RBP13.01□□□□□ -0.33
SFXN1-201ENST00000321442 H3BMG7 143 aa13.01□□□□□ -0.33
SFXN1-201ENST00000321442 LTAP01374 205 aa13.01□□□□□ -0.33
SFXN1-201ENST00000321442 ZNF503Q96F45 646 aa13.01□□□□□ -0.33
SFXN1-201ENST00000321442 VCX2Q9H322 139 aa13.01□□□□□ -0.33
SFXN1-201ENST00000321442 EFNA4P52798 201 aa13□□□□□ -0.33
SFXN1-201ENST00000321442 SNRPD3P62318 126 aaKnown RBP13□□□□□ -0.33
SFXN1-201ENST00000321442 NUP37Q8NFH4 326 aa13□□□□□ -0.33
SFXN1-201ENST00000321442 RITA1Q96K30 269 aa13□□□□□ -0.33
SFXN1-201ENST00000321442 VGLL1Q99990 258 aa13□□□□□ -0.33
SFXN1-201ENST00000321442 SIGLEC15Q6ZMC9 328 aa13□□□□□ -0.33
SFXN1-201ENST00000321442 LGALS9BQ3B8N2 356 aa13□□□□□ -0.33
SFXN1-201ENST00000321442 PAPPA-AS1Q5QFB9 102 aa13□□□□□ -0.33
SFXN1-201ENST00000321442 LGALS9CQ6DKI2 356 aa13□□□□□ -0.33
SFXN1-201ENST00000321442 THAP8Q8NA92 274 aa13□□□□□ -0.33
SFXN1-201ENST00000321442 PRSS46E5RG02 174 aa12.99□□□□□ -0.33
SFXN1-201ENST00000321442 GATA1P15976 413 aaPredicted RBP12.99□□□□□ -0.33
SFXN1-201ENST00000321442 CKS1BP61024 79 aa12.99□□□□□ -0.33
SFXN1-201ENST00000321442 H7C1H1 209 aa12.99□□□□□ -0.33
SFXN1-201ENST00000321442 K7EP34 96 aa12.99□□□□□ -0.33
SFXN1-201ENST00000321442 NDUFS8O00217 210 aa12.99□□□□□ -0.33
SFXN1-201ENST00000321442 PDE6HQ13956 83 aa12.99□□□□□ -0.33
SFXN1-201ENST00000321442 IL17RELQ6ZVW7 336 aa12.99□□□□□ -0.33
SFXN1-201ENST00000321442 RNF114Q9Y508 228 aa12.99□□□□□ -0.33
SFXN1-201ENST00000321442 A0A1W2PPM0 123 aa12.99□□□□□ -0.33
SFXN1-201ENST00000321442 SPRY2O43597 315 aa12.99□□□□□ -0.33
SFXN1-201ENST00000321442 RAX2Q96IS3 184 aa12.99□□□□□ -0.33
SFXN1-201ENST00000321442 NCOR1P1Q9H4R4 102 aa12.99□□□□□ -0.33
SFXN1-201ENST00000321442 TNFRSF18Q9Y5U5 241 aa12.99□□□□□ -0.33
SFXN1-201ENST00000321442 TRAV12-3A0A0B4J271 114 aa12.98□□□□□ -0.33
SFXN1-201ENST00000321442 NPC2P61916 151 aa12.98□□□□□ -0.33
SFXN1-201ENST00000321442 ZNF491Q8N8L2 437 aa12.98□□□□□ -0.33
SFXN1-201ENST00000321442 TAX1BP3O14907 124 aa12.98□□□□□ -0.33
SFXN1-201ENST00000321442 CIRBPQ14011 172 aaKnown RBP12.98□□□□□ -0.33
SFXN1-201ENST00000321442 DAZAP2Q15038 168 aaPredicted RBP12.98□□□□□ -0.33
SFXN1-201ENST00000321442 TEX29Q8N6K0 151 aa12.98□□□□□ -0.33
SFXN1-201ENST00000321442 RNF5Q99942 180 aa12.98□□□□□ -0.33
SFXN1-201ENST00000321442 ANAPC13Q9BS18 74 aa12.98□□□□□ -0.33
SFXN1-201ENST00000321442 MSRB1Q9NZV6 116 aa12.98□□□□□ -0.33
SFXN1-201ENST00000321442 PLNP26678 52 aa12.98□□□□□ -0.33
SFXN1-201ENST00000321442 CSTL1Q9H114 145 aa12.98□□□□□ -0.33
SFXN1-201ENST00000321442 CTSZQ9UBR2 303 aa12.97□□□□□ -0.33
SFXN1-201ENST00000321442 A0A087WWL8 130 aa12.97□□□□□ -0.33
SFXN1-201ENST00000321442 ZNF562Q6V9R5 426 aa12.97□□□□□ -0.33
SFXN1-201ENST00000321442 C1orf122Q6ZSJ8 110 aa12.97□□□□□ -0.33
SFXN1-201ENST00000321442 C2orf70A6NJV1 201 aa12.96□□□□□ -0.33
SFXN1-201ENST00000321442 G3V318 75 aa12.96□□□□□ -0.33
SFXN1-201ENST00000321442 DLX4Q92988 240 aaPredicted RBP12.96□□□□□ -0.33
SFXN1-201ENST00000321442 C19orf54Q5BKX5 351 aa12.96□□□□□ -0.33
SFXN1-201ENST00000321442 GDF5OSQ5U4N7 250 aa12.96□□□□□ -0.33
SFXN1-201ENST00000321442 EGR2P11161 476 aaPredicted RBP12.96□□□□□ -0.34
SFXN1-201ENST00000321442 NUP210LQ5VU65 1888 aa12.96□□□□□ -0.34
SFXN1-201ENST00000321442 TEX36Q5VZQ5 186 aa12.96□□□□□ -0.34
SFXN1-201ENST00000321442 IGKV1-17P01599 117 aa12.95□□□□□ -0.34
SFXN1-201ENST00000321442 IGLV2-8P01709 118 aa12.95□□□□□ -0.34
SFXN1-201ENST00000321442 RUSC1-AS1Q66K80 236 aa12.95□□□□□ -0.34
SFXN1-201ENST00000321442 LINC00322Q6ZN03 302 aaPredicted RBP12.95□□□□□ -0.34
SFXN1-201ENST00000321442 C1orf229Q6ZS94 237 aaPredicted RBP12.95□□□□□ -0.34
SFXN1-201ENST00000321442 DTX2Q86UW9 622 aa12.95□□□□□ -0.34
SFXN1-201ENST00000321442 LINC01549A6NIU2 74 aa12.95□□□□□ -0.34
SFXN1-201ENST00000321442 ZNF688P0C7X2 276 aa12.95□□□□□ -0.34
SFXN1-201ENST00000321442 NEGR1Q7Z3B1 354 aa12.95□□□□□ -0.34
SFXN1-201ENST00000321442 SPINK8P0C7L1 97 aa12.95□□□□□ -0.34
SFXN1-201ENST00000321442 IGHV3-73A0A0B4J1V6 119 aa12.94□□□□□ -0.34
SFXN1-201ENST00000321442 A0A1W2PRX2 142 aa12.94□□□□□ -0.34
SFXN1-201ENST00000321442 H3BRN7 92 aa12.94□□□□□ -0.34
SFXN1-201ENST00000321442 LHBP01229 141 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms