RNA–Protein interactions for RNA: ENST00000311550.9

GABRB3-202, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABRB3, Length 5,781 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-202ENST00000311550 KIR2DL5BA0A0G2JPC4 375 aa13.58□□□□□ -0.24
GABRB3-202ENST00000311550 EGR2P11161 476 aaPredicted RBP13.58□□□□□ -0.24
GABRB3-202ENST00000311550 KIR2DL5AQ8N109 375 aa13.58□□□□□ -0.24
GABRB3-202ENST00000311550 DYNAPQ8N1N2 210 aa13.58□□□□□ -0.24
GABRB3-202ENST00000311550 FAM167A-AS1Q96KT0 104 aa13.58□□□□□ -0.24
GABRB3-202ENST00000311550 SPXQ9BT56 116 aa13.58□□□□□ -0.24
GABRB3-202ENST00000311550 SAP30O75446 220 aa13.58□□□□□ -0.24
GABRB3-202ENST00000311550 ZNF295-AS1Q8N0V1 137 aa13.58□□□□□ -0.24
GABRB3-202ENST00000311550 C10orf126Q8N4M7 172 aa13.58□□□□□ -0.24
GABRB3-202ENST00000311550 CENPFP49454 3210 aa13.58□□□□□ -0.24
GABRB3-202ENST00000311550 MRPL36Q9P0J6 103 aaKnown RBP13.57□□□□□ -0.24
GABRB3-202ENST00000311550 ADARB2-AS1A8MUL3 147 aa13.57□□□□□ -0.24
GABRB3-202ENST00000311550 KLHL30-AS1Q8NEE0 82 aa13.57□□□□□ -0.24
GABRB3-202ENST00000311550 IGF2BP2-AS1Q96M15 143 aa13.57□□□□□ -0.24
GABRB3-202ENST00000311550 IGKV1-17P01599 117 aa13.57□□□□□ -0.24
GABRB3-202ENST00000311550 ZNF415Q09FC8 603 aa13.57□□□□□ -0.24
GABRB3-202ENST00000311550 UTF1Q5T230 341 aa13.57□□□□□ -0.24
GABRB3-202ENST00000311550 TRAV12-2A0A075B6T6 113 aa13.57□□□□□ -0.24
GABRB3-202ENST00000311550 M0R2P5 195 aa13.56□□□□□ -0.24
GABRB3-202ENST00000311550 LGALS9BQ3B8N2 356 aa13.56□□□□□ -0.24
GABRB3-202ENST00000311550 LGALS9CQ6DKI2 356 aa13.56□□□□□ -0.24
GABRB3-202ENST00000311550 MRPL35Q9NZE8 188 aaKnown RBP13.56□□□□□ -0.24
GABRB3-202ENST00000311550 DKK2Q9UBU2 259 aa13.56□□□□□ -0.24
GABRB3-202ENST00000311550 BRWD1-AS2P59051 145 aa13.56□□□□□ -0.24
GABRB3-202ENST00000311550 LINC00173Q6ZV60 143 aa13.56□□□□□ -0.24
GABRB3-202ENST00000311550 MTURNQ8N3F0 131 aa13.56□□□□□ -0.24
GABRB3-202ENST00000311550 PLEKHB2Q96CS7 222 aa13.56□□□□□ -0.24
GABRB3-202ENST00000311550 PROP1O75360 226 aa13.56□□□□□ -0.24
GABRB3-202ENST00000311550 CST9LQ9H4G1 147 aa13.56□□□□□ -0.24
GABRB3-202ENST00000311550 DYSFO75923 2080 aa13.56□□□□□ -0.24
GABRB3-202ENST00000311550 SPRY2O43597 315 aa13.56□□□□□ -0.24
GABRB3-202ENST00000311550 RNF223E7ERA6 249 aa13.55□□□□□ -0.24
GABRB3-202ENST00000311550 I3L2K1 104 aa13.55□□□□□ -0.24
GABRB3-202ENST00000311550 K7EIM0 57 aa13.55□□□□□ -0.24
GABRB3-202ENST00000311550 KLF5Q13887 457 aaPredicted RBP13.55□□□□□ -0.24
GABRB3-202ENST00000311550 GTSF1LQ9H1H1 148 aa13.55□□□□□ -0.24
GABRB3-202ENST00000311550 LINC01356Q8N9X3 169 aa13.55□□□□□ -0.24
GABRB3-202ENST00000311550 SLC25A16P16260 332 aa13.55□□□□□ -0.24
GABRB3-202ENST00000311550 ADAMTSL5Q6ZMM2 481 aa13.55□□□□□ -0.24
GABRB3-202ENST00000311550 C1orf159Q96HA4 380 aa13.55□□□□□ -0.24
GABRB3-202ENST00000311550 HOXB4P17483 251 aaPredicted RBP13.54□□□□□ -0.24
GABRB3-202ENST00000311550 DLX4Q92988 240 aaPredicted RBP13.54□□□□□ -0.24
GABRB3-202ENST00000311550 ANKHD1Q8IWZ3 2542 aaKnown RBP13.54□□□□□ -0.24
GABRB3-202ENST00000311550 RPL35AP18077 110 aaKnown RBP13.54□□□□□ -0.24
GABRB3-202ENST00000311550 ZNF747Q9BV97 191 aa13.54□□□□□ -0.24
GABRB3-202ENST00000311550 BVES-AS1Q5T3Y7 98 aa13.54□□□□□ -0.24
GABRB3-202ENST00000311550 CFAP161Q6P656 301 aa13.54□□□□□ -0.24
GABRB3-202ENST00000311550 F6UB75 175 aa13.54□□□□□ -0.24
GABRB3-202ENST00000311550 P0C879 139 aa13.54□□□□□ -0.24
GABRB3-202ENST00000311550 AGPAT4-IT1Q9H0P7 198 aa13.54□□□□□ -0.24
GABRB3-202ENST00000311550 C11orf68Q9H3H3 251 aaKnown RBP13.54□□□□□ -0.24
GABRB3-202ENST00000311550 MUC22E2RYF6 1773 aaPredicted RBP13.54□□□□□ -0.24
GABRB3-202ENST00000311550 FOXE3Q13461 319 aa13.53□□□□□ -0.24
GABRB3-202ENST00000311550 OCIAD2Q56VL3 154 aa13.53□□□□□ -0.24
GABRB3-202ENST00000311550 NDUFA4O00483 81 aa13.53□□□□□ -0.24
GABRB3-202ENST00000311550 GATA1P15976 413 aaPredicted RBP13.53□□□□□ -0.24
GABRB3-202ENST00000311550 RPL36AP83881 106 aaKnown RBP13.53□□□□□ -0.24
GABRB3-202ENST00000311550 Q5PR19 223 aa13.53□□□□□ -0.24
GABRB3-202ENST00000311550 RPL36ALQ969Q0 106 aaKnown RBP13.53□□□□□ -0.24
GABRB3-202ENST00000311550 CFHR4Q92496 578 aa13.52□□□□□ -0.24
GABRB3-202ENST00000311550 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.52□□□□□ -0.24
GABRB3-202ENST00000311550 TRAV13-1A0A0B4J241 112 aa13.52□□□□□ -0.24
GABRB3-202ENST00000311550 IGLV2-23P01705 113 aa13.52□□□□□ -0.24
GABRB3-202ENST00000311550 SDHAF1A6NFY7 115 aa13.52□□□□□ -0.25
GABRB3-202ENST00000311550 C9orf118A6NHY6 69 aa13.52□□□□□ -0.25
GABRB3-202ENST00000311550 NDUFS8O00217 210 aa13.52□□□□□ -0.25
GABRB3-202ENST00000311550 NCKAP5O14513 1909 aa13.52□□□□□ -0.25
GABRB3-202ENST00000311550 LINC00158P58513 81 aa13.52□□□□□ -0.25
GABRB3-202ENST00000311550 TIMM21Q9BVV7 248 aa13.52□□□□□ -0.25
GABRB3-202ENST00000311550 SMIM2Q9BVW6 85 aa13.52□□□□□ -0.25
GABRB3-202ENST00000311550 TNCP24821 2201 aa13.51□□□□□ -0.25
GABRB3-202ENST00000311550 OR11H6Q8NGC7 330 aa13.51□□□□□ -0.25
GABRB3-202ENST00000311550 GTSF1Q8WW33 167 aa13.51□□□□□ -0.25
GABRB3-202ENST00000311550 RBMY1BA6NDE4 496 aaKnown RBP13.51□□□□□ -0.25
GABRB3-202ENST00000311550 RBMY1EA6NEQ0 496 aaKnown RBP13.51□□□□□ -0.25
GABRB3-202ENST00000311550 RBMY1DP0C7P1 496 aaKnown RBP13.51□□□□□ -0.25
GABRB3-202ENST00000311550 RBMY1A1P0DJD3 496 aaKnown RBP13.51□□□□□ -0.25
GABRB3-202ENST00000311550 RBMY1CP0DJD4 496 aa13.51□□□□□ -0.25
GABRB3-202ENST00000311550 MALP21145 153 aa13.51□□□□□ -0.25
GABRB3-202ENST00000311550 TRPT1Q86TN4 253 aaKnown RBP13.51□□□□□ -0.25
GABRB3-202ENST00000311550 IGHV3-16A0A0C4DH30 117 aa13.51□□□□□ -0.25
GABRB3-202ENST00000311550 INSP01308 110 aa13.51□□□□□ -0.25
GABRB3-202ENST00000311550 TRAV8-4A0A0B4J246 113 aa13.51□□□□□ -0.25
GABRB3-202ENST00000311550 MORN3Q6PF18 240 aaPredicted RBP13.51□□□□□ -0.25
GABRB3-202ENST00000311550 K7ERJ3 54 aa13.5□□□□□ -0.25
GABRB3-202ENST00000311550 MSRB1Q9NZV6 116 aa13.5□□□□□ -0.25
GABRB3-202ENST00000311550 XCL2Q9UBD3 114 aa13.5□□□□□ -0.25
GABRB3-202ENST00000311550 NUP210LQ5VU65 1888 aa13.5□□□□□ -0.25
GABRB3-202ENST00000311550 PTPRQQ9UMZ3 2332 aa13.49□□□□□ -0.25
GABRB3-202ENST00000311550 IGHV7-81A0A0B4J1V7 117 aa13.49□□□□□ -0.25
GABRB3-202ENST00000311550 LY6G5BQ8NDX9 201 aa13.49□□□□□ -0.25
GABRB3-202ENST00000311550 ZNF625Q96I27 306 aaPredicted RBP13.49□□□□□ -0.25
GABRB3-202ENST00000311550 PRADC1Q9BSG0 188 aa13.49□□□□□ -0.25
GABRB3-202ENST00000311550 GAGE1Q13065 139 aa13.48□□□□□ -0.25
GABRB3-202ENST00000311550 PCP2Q8IVA1 136 aa13.48□□□□□ -0.25
GABRB3-202ENST00000311550 GNRH2O43555 120 aa13.48□□□□□ -0.25
GABRB3-202ENST00000311550 PMVKQ15126 192 aa13.48□□□□□ -0.25
GABRB3-202ENST00000311550 C1orf229Q6ZS94 237 aaPredicted RBP13.48□□□□□ -0.25
GABRB3-202ENST00000311550 ZNF503Q96F45 646 aa13.48□□□□□ -0.25
GABRB3-202ENST00000311550 CR1LQ2VPA4 569 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms