RNA–Protein interactions for RNA: ENST00000309934.4

SEC22A-201, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22A, Length 4,228 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-201ENST00000309934 VCANP13611 3396 aa4.76□□□□□ -1.65
SEC22A-201ENST00000309934 ZNF56Q15929 161 aa4.76□□□□□ -1.65
SEC22A-201ENST00000309934 KHDC1LQ5JSQ8 128 aa4.76□□□□□ -1.65
SEC22A-201ENST00000309934 RPP25LQ8N5L8 163 aaKnown RBP4.76□□□□□ -1.65
SEC22A-201ENST00000309934 DYNLRB2Q8TF09 96 aa4.76□□□□□ -1.65
SEC22A-201ENST00000309934 FOXC2Q99958 501 aa4.76□□□□□ -1.65
SEC22A-201ENST00000309934 SPANXB1Q9NS25 103 aaPredicted RBP4.76□□□□□ -1.65
SEC22A-201ENST00000309934 IGHV4-61A0A0C4DH41 118 aa4.75□□□□□ -1.65
SEC22A-201ENST00000309934 VWC2LB2RUY7 222 aa4.75□□□□□ -1.65
SEC22A-201ENST00000309934 NDUFA4O00483 81 aa4.75□□□□□ -1.65
SEC22A-201ENST00000309934 CRYGBP07316 175 aa4.75□□□□□ -1.65
SEC22A-201ENST00000309934 S100A7L2Q5SY68 101 aa4.75□□□□□ -1.65
SEC22A-201ENST00000309934 GTSCR1Q86UQ5 136 aa4.75□□□□□ -1.65
SEC22A-201ENST00000309934 EPDR1Q9UM22 224 aa4.75□□□□□ -1.65
SEC22A-201ENST00000309934 DYSFO75923 2080 aa4.75□□□□□ -1.65
SEC22A-201ENST00000309934 FAM181BA6NEQ2 426 aa4.75□□□□□ -1.65
SEC22A-201ENST00000309934 PMS2P5A8MQ11 134 aa4.75□□□□□ -1.65
SEC22A-201ENST00000309934 LY6EQ16553 131 aa4.75□□□□□ -1.65
SEC22A-201ENST00000309934 TAL2Q16559 108 aa4.75□□□□□ -1.65
SEC22A-201ENST00000309934 C11orf52Q96A22 123 aa4.75□□□□□ -1.65
SEC22A-201ENST00000309934 C1orf159Q96HA4 380 aa4.75□□□□□ -1.65
SEC22A-201ENST00000309934 C16orf92Q96LL3 132 aa4.75□□□□□ -1.65
SEC22A-201ENST00000309934 Q96MF0 132 aa4.75□□□□□ -1.65
SEC22A-201ENST00000309934 LOC107984640A0A0U1RRK4 108 aa4.75□□□□□ -1.65
SEC22A-201ENST00000309934 H7C1H1 209 aa4.75□□□□□ -1.65
SEC22A-201ENST00000309934 DPM2O94777 84 aa4.75□□□□□ -1.65
SEC22A-201ENST00000309934 WT1-ASQ06250 92 aa4.75□□□□□ -1.65
SEC22A-201ENST00000309934 CT83Q5H943 113 aa4.75□□□□□ -1.65
SEC22A-201ENST00000309934 MIR17HGQ75NE6 70 aa4.75□□□□□ -1.65
SEC22A-201ENST00000309934 SPATA25Q9BR10 227 aa4.75□□□□□ -1.65
SEC22A-201ENST00000309934 SH2D7A6NKC9 451 aaPredicted RBP4.74□□□□□ -1.65
SEC22A-201ENST00000309934 SRRM4A7MD48 611 aaKnown RBP4.74□□□□□ -1.65
SEC22A-201ENST00000309934 GATA2P23769 480 aaPredicted RBP4.74□□□□□ -1.65
SEC22A-201ENST00000309934 C15orf32Q32M92 178 aa4.74□□□□□ -1.65
SEC22A-201ENST00000309934 C15orf53Q8NAA6 179 aa4.74□□□□□ -1.65
SEC22A-201ENST00000309934 PLCE1Q9P212 2302 aa4.74□□□□□ -1.65
SEC22A-201ENST00000309934 IGHV4-30-2A0A087WSY4 118 aa4.74□□□□□ -1.65
SEC22A-201ENST00000309934 FAM236DA0A1B0GTK5 79 aa4.74□□□□□ -1.65
SEC22A-201ENST00000309934 RNF223E7ERA6 249 aa4.74□□□□□ -1.65
SEC22A-201ENST00000309934 C19orf84I3L1E1 186 aa4.74□□□□□ -1.65
SEC22A-201ENST00000309934 AMY1AP04745 511 aa4.74□□□□□ -1.65
SEC22A-201ENST00000309934 FAM236CP0DP71 79 aa4.74□□□□□ -1.65
SEC22A-201ENST00000309934 HERVK_113P63121 156 aa4.74□□□□□ -1.65
SEC22A-201ENST00000309934 ATP5L2Q7Z4Y8 100 aa4.74□□□□□ -1.65
SEC22A-201ENST00000309934 HAPLN4Q86UW8 402 aa4.74□□□□□ -1.65
SEC22A-201ENST00000309934 ZGRF1Q86YA3 2104 aa4.74□□□□□ -1.65
SEC22A-201ENST00000309934 IGLV11-55A0A075B6I3 123 aa4.74□□□□□ -1.65
SEC22A-201ENST00000309934 PPP1R17O96001 155 aa4.74□□□□□ -1.65
SEC22A-201ENST00000309934 LEPP41159 167 aa4.74□□□□□ -1.65
SEC22A-201ENST00000309934 NEGR1Q7Z3B1 354 aa4.74□□□□□ -1.65
SEC22A-201ENST00000309934 GATD1Q8NB37 220 aa4.74□□□□□ -1.65
SEC22A-201ENST00000309934 ZNF502Q8TBZ5 544 aa4.74□□□□□ -1.65
SEC22A-201ENST00000309934 CFHR4Q92496 578 aa4.74□□□□□ -1.65
SEC22A-201ENST00000309934 LINC00477Q96M19 166 aa4.74□□□□□ -1.65
SEC22A-201ENST00000309934 Q9H3A6 140 aa4.74□□□□□ -1.65
SEC22A-201ENST00000309934 IL36BQ9NZH7 164 aa4.74□□□□□ -1.65
SEC22A-201ENST00000309934 ZNRD1Q9P1U0 126 aa4.74□□□□□ -1.65
SEC22A-201ENST00000309934 FREM1Q5H8C1 2179 aa4.74□□□□□ -1.65
SEC22A-201ENST00000309934 IGF2RP11717 2491 aa4.74□□□□□ -1.65
SEC22A-201ENST00000309934 TRAV13-1A0A0B4J241 112 aa4.73□□□□□ -1.65
SEC22A-201ENST00000309934 H3BRN7 92 aa4.73□□□□□ -1.65
SEC22A-201ENST00000309934 LY6HO94772 140 aa4.73□□□□□ -1.65
SEC22A-201ENST00000309934 FOXA3P55318 350 aaPredicted RBP4.73□□□□□ -1.65
SEC22A-201ENST00000309934 FOXI1Q12951 378 aa4.73□□□□□ -1.65
SEC22A-201ENST00000309934 TRBV6-1A0A0K0K1D8 114 aa4.73□□□□□ -1.65
SEC22A-201ENST00000309934 A6NDX4 124 aa4.73□□□□□ -1.65
SEC22A-201ENST00000309934 IGHG2P01859 326 aa4.73□□□□□ -1.65
SEC22A-201ENST00000309934 CLEC19AQ6UXS0 136 aa4.73□□□□□ -1.65
SEC22A-201ENST00000309934 FAM231DQ6ZW35 169 aa4.73□□□□□ -1.65
SEC22A-201ENST00000309934 TMEM219Q86XT9 240 aa4.73□□□□□ -1.65
SEC22A-201ENST00000309934 Q8N6K4 173 aa4.73□□□□□ -1.65
SEC22A-201ENST00000309934 C5orf56Q8N8D9 126 aa4.73□□□□□ -1.65
SEC22A-201ENST00000309934 ZNF492Q9P255 531 aa4.73□□□□□ -1.65
SEC22A-201ENST00000309934 PRO0628Q9UI54 55 aa4.73□□□□□ -1.65
SEC22A-201ENST00000309934 NAV2Q8IVL1 2488 aa4.73□□□□□ -1.65
SEC22A-201ENST00000309934 TMEM213A2RRL7 107 aa4.73□□□□□ -1.65
SEC22A-201ENST00000309934 GGTLC3B5MD39 225 aa4.73□□□□□ -1.65
SEC22A-201ENST00000309934 ATP6V0E1O15342 81 aa4.73□□□□□ -1.65
SEC22A-201ENST00000309934 NUPR1O60356 82 aa4.73□□□□□ -1.65
SEC22A-201ENST00000309934 CRIP2P52943 208 aaPredicted RBP4.73□□□□□ -1.65
SEC22A-201ENST00000309934 C10orf55Q5SWW7 151 aa4.73□□□□□ -1.65
SEC22A-201ENST00000309934 GOLT1AQ6ZVE7 132 aa4.73□□□□□ -1.65
SEC22A-201ENST00000309934 Q8N9W7 124 aa4.73□□□□□ -1.65
SEC22A-201ENST00000309934 TMEM75Q8N9X5 138 aa4.73□□□□□ -1.65
SEC22A-201ENST00000309934 WFDC11Q8NEX6 87 aa4.73□□□□□ -1.65
SEC22A-201ENST00000309934 GFRA4Q9GZZ7 299 aa4.73□□□□□ -1.65
SEC22A-201ENST00000309934 C5orf42Q9H799 3197 aa4.73□□□□□ -1.65
SEC22A-201ENST00000309934 I3L2K1 104 aa4.73□□□□□ -1.65
SEC22A-201ENST00000309934 HOXA3O43365 443 aaPredicted RBP4.73□□□□□ -1.65
SEC22A-201ENST00000309934 IGF1P05019 195 aa4.73□□□□□ -1.65
SEC22A-201ENST00000309934 COX6CP09669 75 aa4.73□□□□□ -1.65
SEC22A-201ENST00000309934 ZFP36P26651 326 aaKnown RBP4.73□□□□□ -1.65
SEC22A-201ENST00000309934 CENPWQ5EE01 88 aa4.73□□□□□ -1.65
SEC22A-201ENST00000309934 MYO7BQ6PIF6 2116 aa4.73□□□□□ -1.65
SEC22A-201ENST00000309934 LENEPQ9Y5L5 61 aa4.73□□□□□ -1.65
SEC22A-201ENST00000309934 DOCK11Q5JSL3 2073 aa4.72□□□□□ -1.65
SEC22A-201ENST00000309934 RBAKDNA6NC62 111 aa4.72□□□□□ -1.65
SEC22A-201ENST00000309934 LINC01549A6NIU2 74 aa4.72□□□□□ -1.65
SEC22A-201ENST00000309934 CGB1A6NKQ9 187 aa4.72□□□□□ -1.65
SEC22A-201ENST00000309934 TEX22C9J3V5 150 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms