RNA–Protein interactions for RNA: ENST00000302787.2

LETM1-201, Transcript of leucine zipper and EF-hand containing transmembrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LETM1, Length 5,462 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETM1-201ENST00000302787 HLA-DRB4P13762 266 aa16.65■□□□□ 0.26
LETM1-201ENST00000302787 HLA-DRB4X5D2U9 266 aa16.65■□□□□ 0.26
LETM1-201ENST00000302787 SPRNQ5BIV9 151 aa16.65■□□□□ 0.26
LETM1-201ENST00000302787 BVES-AS1Q5T3Y7 98 aa16.65■□□□□ 0.26
LETM1-201ENST00000302787 WIPF2Q8TF74 440 aaPredicted RBP16.65■□□□□ 0.26
LETM1-201ENST00000302787 DIDO1Q9BTC0 2240 aaKnown RBP16.64■□□□□ 0.26
LETM1-201ENST00000302787 PLA2G2EQ9NZK7 142 aa16.64■□□□□ 0.25
LETM1-201ENST00000302787 C22orf46C9J442 243 aa16.64■□□□□ 0.25
LETM1-201ENST00000302787 CFHR3Q02985 330 aa16.64■□□□□ 0.25
LETM1-201ENST00000302787 TCTEX1D4Q5JR98 221 aa16.64■□□□□ 0.25
LETM1-201ENST00000302787 OR11H6Q8NGC7 330 aa16.64■□□□□ 0.25
LETM1-201ENST00000302787 PYGO2Q9BRQ0 406 aa16.64■□□□□ 0.25
LETM1-201ENST00000302787 USF3Q68DE3 2245 aa16.64■□□□□ 0.25
LETM1-201ENST00000302787 GAGE2AQ6NT46 116 aa16.63■□□□□ 0.25
LETM1-201ENST00000302787 MAJINQ3KP22 176 aa16.63■□□□□ 0.25
LETM1-201ENST00000302787 SHISA9B4DS77 424 aa16.63■□□□□ 0.25
LETM1-201ENST00000302787 RNF114Q9Y508 228 aa16.63■□□□□ 0.25
LETM1-201ENST00000302787 KLF5Q13887 457 aaPredicted RBP16.63■□□□□ 0.25
LETM1-201ENST00000302787 IGHV7-4-1A0A0J9YVY3 117 aa16.63■□□□□ 0.25
LETM1-201ENST00000302787 AZU1P20160 251 aa16.63■□□□□ 0.25
LETM1-201ENST00000302787 HLA-DMBP28068 263 aa16.63■□□□□ 0.25
LETM1-201ENST00000302787 TCF15Q12870 199 aa16.63■□□□□ 0.25
LETM1-201ENST00000302787 PLXNB3Q9ULL4 1909 aa16.62■□□□□ 0.25
LETM1-201ENST00000302787 TRBV20-1A0A075B6N2 111 aa16.62■□□□□ 0.25
LETM1-201ENST00000302787 K7EP34 96 aa16.62■□□□□ 0.25
LETM1-201ENST00000302787 NDUFS7O75251 213 aa16.62■□□□□ 0.25
LETM1-201ENST00000302787 LHBP01229 141 aa16.62■□□□□ 0.25
LETM1-201ENST00000302787 F8VRH5 84 aa16.62■□□□□ 0.25
LETM1-201ENST00000302787 PIP4P1Q86T03 277 aa16.62■□□□□ 0.25
LETM1-201ENST00000302787 CDPF1Q6NVV7 123 aa16.61■□□□□ 0.25
LETM1-201ENST00000302787 TRBV25-1A0A075B6N4 114 aa16.61■□□□□ 0.25
LETM1-201ENST00000302787 DNAJC30Q96LL9 226 aa16.61■□□□□ 0.25
LETM1-201ENST00000302787 DYNAPQ8N1N2 210 aa16.61■□□□□ 0.25
LETM1-201ENST00000302787 DKK2Q9UBU2 259 aa16.61■□□□□ 0.25
LETM1-201ENST00000302787 CEND1Q8N111 149 aa16.61■□□□□ 0.25
LETM1-201ENST00000302787 IGHV3-38A0A0C4DH36 116 aa16.6■□□□□ 0.25
LETM1-201ENST00000302787 HOXB4P17483 251 aaPredicted RBP16.6■□□□□ 0.25
LETM1-201ENST00000302787 C20orf78Q9BR46 151 aa16.6■□□□□ 0.25
LETM1-201ENST00000302787 H3BMM0 161 aa16.6■□□□□ 0.25
LETM1-201ENST00000302787 UBE2WQ96B02 151 aa16.6■□□□□ 0.25
LETM1-201ENST00000302787 EGR2P11161 476 aaPredicted RBP16.59■□□□□ 0.25
LETM1-201ENST00000302787 ZNRF2Q8NHG8 242 aa16.59■□□□□ 0.25
LETM1-201ENST00000302787 WNK2Q9Y3S1 2297 aa16.59■□□□□ 0.25
LETM1-201ENST00000302787 A0A1W2PPM0 123 aa16.58■□□□□ 0.24
LETM1-201ENST00000302787 UBE2DNLQ8IWF7 75 aa16.58■□□□□ 0.24
LETM1-201ENST00000302787 VWC2LB2RUY7 222 aa16.58■□□□□ 0.24
LETM1-201ENST00000302787 ZNF747Q9BV97 191 aa16.58■□□□□ 0.24
LETM1-201ENST00000302787 F8W1H4 67 aa16.58■□□□□ 0.24
LETM1-201ENST00000302787 INS-IGF2F8WCM5 200 aa16.58■□□□□ 0.24
LETM1-201ENST00000302787 K7EP13 123 aa16.58■□□□□ 0.24
LETM1-201ENST00000302787 NDUFA12Q9UI09 145 aa16.57■□□□□ 0.24
LETM1-201ENST00000302787 KLF12Q9Y4X4 402 aa16.57■□□□□ 0.24
LETM1-201ENST00000302787 WT1P19544 449 aaPredicted RBP16.57■□□□□ 0.24
LETM1-201ENST00000302787 TAL2Q16559 108 aa16.57■□□□□ 0.24
LETM1-201ENST00000302787 CFHR4Q92496 578 aa16.57■□□□□ 0.24
LETM1-201ENST00000302787 AGPAT4-IT1Q9H0P7 198 aa16.57■□□□□ 0.24
LETM1-201ENST00000302787 Q96MF0 132 aa16.57■□□□□ 0.24
LETM1-201ENST00000302787 SLX1AQ9BQ83 275 aa16.57■□□□□ 0.24
LETM1-201ENST00000302787 SIVA1O15304 175 aa16.57■□□□□ 0.24
LETM1-201ENST00000302787 ZNF48Q96MX3 618 aaPredicted RBP16.56■□□□□ 0.24
LETM1-201ENST00000302787 J3QLI3 93 aa16.56■□□□□ 0.24
LETM1-201ENST00000302787 ETDBQ3ZM63 59 aa16.56■□□□□ 0.24
LETM1-201ENST00000302787 COA6Q5JTJ3 125 aaKnown RBP16.56■□□□□ 0.24
LETM1-201ENST00000302787 CADP27708 2225 aa16.56■□□□□ 0.24
LETM1-201ENST00000302787 K7ERJ3 54 aa16.56■□□□□ 0.24
LETM1-201ENST00000302787 GAGE7O76087 117 aa16.56■□□□□ 0.24
LETM1-201ENST00000302787 GAGE12FP0CL80 117 aa16.56■□□□□ 0.24
LETM1-201ENST00000302787 GAGE12GP0CL81 117 aa16.56■□□□□ 0.24
LETM1-201ENST00000302787 GAGE12IP0CL82 117 aa16.56■□□□□ 0.24
LETM1-201ENST00000302787 CACNA1GO43497 2377 aa16.55■□□□□ 0.24
LETM1-201ENST00000302787 FGF6P10767 208 aa16.55■□□□□ 0.24
LETM1-201ENST00000302787 PPDPFLQ8WWR9 84 aa16.55■□□□□ 0.24
LETM1-201ENST00000302787 TMEM243Q9BU79 118 aa16.55■□□□□ 0.24
LETM1-201ENST00000302787 TSSC4Q9Y5U2 329 aaPredicted RBP16.55■□□□□ 0.24
LETM1-201ENST00000302787 H3BUA1 57 aa16.55■□□□□ 0.24
LETM1-201ENST00000302787 FOXE3Q13461 319 aa16.55■□□□□ 0.24
LETM1-201ENST00000302787 IGFL2Q6UWQ7 119 aa16.55■□□□□ 0.24
LETM1-201ENST00000302787 PFN2P35080 140 aa16.55■□□□□ 0.24
LETM1-201ENST00000302787 CR1LQ2VPA4 569 aa16.55■□□□□ 0.24
LETM1-201ENST00000302787 PRSS33Q8NF86 280 aa16.55■□□□□ 0.24
LETM1-201ENST00000302787 RBAKDNA6NC62 111 aa16.54■□□□□ 0.24
LETM1-201ENST00000302787 GP9P14770 177 aa16.54■□□□□ 0.24
LETM1-201ENST00000302787 PRO1854Q9UHT4 67 aa16.54■□□□□ 0.24
LETM1-201ENST00000302787 F6UB75 175 aa16.54■□□□□ 0.24
LETM1-201ENST00000302787 DOPEY2Q9Y3R5 2298 aa16.54■□□□□ 0.24
LETM1-201ENST00000302787 J3QQQ9 107 aa16.54■□□□□ 0.24
LETM1-201ENST00000302787 GRNP28799 593 aaKnown RBP16.54■□□□□ 0.24
LETM1-201ENST00000302787 MRPL53Q96EL3 112 aaKnown RBP16.54■□□□□ 0.24
LETM1-201ENST00000302787 EDA2RQ9HAV5 297 aa16.54■□□□□ 0.24
LETM1-201ENST00000302787 GNRH2O43555 120 aa16.53■□□□□ 0.24
LETM1-201ENST00000302787 SRSF2Q01130 221 aaKnown RBP16.53■□□□□ 0.24
LETM1-201ENST00000302787 CACNA1BQ00975 2339 aa16.53■□□□□ 0.24
LETM1-201ENST00000302787 IGFBPL1Q8WX77 278 aa16.53■□□□□ 0.24
LETM1-201ENST00000302787 MORN5Q5VZ52 161 aa16.53■□□□□ 0.24
LETM1-201ENST00000302787 RITA1Q96K30 269 aa16.53■□□□□ 0.24
LETM1-201ENST00000302787 KIR2DL5BA0A0G2JN68 375 aa16.52■□□□□ 0.24
LETM1-201ENST00000302787 KIR2DL5BA0A0G2JPC4 375 aa16.52■□□□□ 0.24
LETM1-201ENST00000302787 I3L2K1 104 aa16.52■□□□□ 0.24
LETM1-201ENST00000302787 KIR2DL5AQ8N109 375 aa16.52■□□□□ 0.24
LETM1-201ENST00000302787 GAGE6Q13070 117 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 114.3 ms