RNA–Protein interactions for RNA: ENST00000302538.9

ABR-202, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABR, Length 5,289 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-202ENST00000302538 TMEM256Q8N2U0 113 aa10.32□□□□□ -0.76
ABR-202ENST00000302538 H3BRN7 92 aa10.31□□□□□ -0.76
ABR-202ENST00000302538 PFN2P35080 140 aa10.31□□□□□ -0.76
ABR-202ENST00000302538 RHOHQ15669 191 aa10.31□□□□□ -0.76
ABR-202ENST00000302538 SPRNQ5BIV9 151 aa10.31□□□□□ -0.76
ABR-202ENST00000302538 SPCS1Q9Y6A9 102 aa10.31□□□□□ -0.76
ABR-202ENST00000302538 ATXN8Q156A1 80 aa10.31□□□□□ -0.76
ABR-202ENST00000302538 ZNF843Q8N446 348 aa10.31□□□□□ -0.76
ABR-202ENST00000302538 Q8NA96 180 aa10.31□□□□□ -0.76
ABR-202ENST00000302538 PMVKQ15126 192 aa10.3□□□□□ -0.76
ABR-202ENST00000302538 TP53BP1Q12888 1972 aaPredicted RBP10.3□□□□□ -0.76
ABR-202ENST00000302538 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.3□□□□□ -0.76
ABR-202ENST00000302538 MYCNOSP40205 109 aa10.3□□□□□ -0.76
ABR-202ENST00000302538 KLF5Q13887 457 aaPredicted RBP10.3□□□□□ -0.76
ABR-202ENST00000302538 ATRAIDQ6UW56 229 aa10.3□□□□□ -0.76
ABR-202ENST00000302538 ZNF106Q9H2Y7 1883 aaKnown RBP10.3□□□□□ -0.76
ABR-202ENST00000302538 SPG11Q96JI7 2443 aa10.3□□□□□ -0.76
ABR-202ENST00000302538 RPL32P62910 135 aaKnown RBP10.3□□□□□ -0.76
ABR-202ENST00000302538 RSPO1Q2MKA7 263 aaPredicted RBP10.3□□□□□ -0.76
ABR-202ENST00000302538 TP53TG1Q9Y2A0 90 aa10.3□□□□□ -0.76
ABR-202ENST00000302538 MED13Q9UHV7 2174 aa10.3□□□□□ -0.76
ABR-202ENST00000302538 MALRD1Q5VYJ5 2156 aa10.3□□□□□ -0.76
ABR-202ENST00000302538 PRSS29PA6NIE9 313 aa10.29□□□□□ -0.76
ABR-202ENST00000302538 TNFRSF6BO95407 300 aa10.29□□□□□ -0.76
ABR-202ENST00000302538 F6UB75 175 aa10.29□□□□□ -0.76
ABR-202ENST00000302538 F8W735 103 aaPredicted RBP10.29□□□□□ -0.76
ABR-202ENST00000302538 NXPH4O95158 308 aa10.29□□□□□ -0.76
ABR-202ENST00000302538 WIPF2Q8TF74 440 aaPredicted RBP10.29□□□□□ -0.76
ABR-202ENST00000302538 LY96Q9Y6Y9 160 aa10.29□□□□□ -0.76
ABR-202ENST00000302538 U3KQE9 123 aa10.29□□□□□ -0.76
ABR-202ENST00000302538 INAFM1C9JVW0 142 aa10.29□□□□□ -0.76
ABR-202ENST00000302538 H3BMM0 161 aa10.29□□□□□ -0.76
ABR-202ENST00000302538 ATP5G1P05496 136 aa10.29□□□□□ -0.76
ABR-202ENST00000302538 C8orf31Q8N9H6 132 aa10.29□□□□□ -0.76
ABR-202ENST00000302538 UBE2WQ96B02 151 aa10.29□□□□□ -0.76
ABR-202ENST00000302538 TMEM213A2RRL7 107 aa10.28□□□□□ -0.76
ABR-202ENST00000302538 HIST2H2BCQ6DN03 193 aa10.28□□□□□ -0.76
ABR-202ENST00000302538 Q8NFD4 153 aa10.28□□□□□ -0.76
ABR-202ENST00000302538 H3BUT2 72 aa10.28□□□□□ -0.76
ABR-202ENST00000302538 Q6ZQT7 251 aa10.28□□□□□ -0.76
ABR-202ENST00000302538 ALPK3Q96L96 1907 aa10.28□□□□□ -0.76
ABR-202ENST00000302538 SDHAF1A6NFY7 115 aa10.28□□□□□ -0.76
ABR-202ENST00000302538 C5orf30Q96GV9 206 aa10.28□□□□□ -0.76
ABR-202ENST00000302538 C1orf43Q9BWL3 253 aa10.28□□□□□ -0.76
ABR-202ENST00000302538 IGLC1P0CG04 106 aa10.28□□□□□ -0.76
ABR-202ENST00000302538 SNHG12Q9BXW3 62 aa10.28□□□□□ -0.76
ABR-202ENST00000302538 CYTL1Q9NRR1 136 aa10.28□□□□□ -0.76
ABR-202ENST00000302538 TRAV8-2A0A0B4J237 113 aa10.27□□□□□ -0.76
ABR-202ENST00000302538 AJUBAQ96IF1 538 aa10.27□□□□□ -0.76
ABR-202ENST00000302538 LAMTOR2Q9Y2Q5 125 aa10.27□□□□□ -0.76
ABR-202ENST00000302538 HLA-DRB4P13762 266 aa10.27□□□□□ -0.76
ABR-202ENST00000302538 WFDC11Q8NEX6 87 aa10.27□□□□□ -0.76
ABR-202ENST00000302538 PRR25Q96S07 402 aa10.27□□□□□ -0.76
ABR-202ENST00000302538 CITED2Q99967 270 aaPredicted RBP10.27□□□□□ -0.76
ABR-202ENST00000302538 HLA-DRB4X5D2U9 266 aa10.27□□□□□ -0.76
ABR-202ENST00000302538 SEM1Q6ZVN7 128 aa10.27□□□□□ -0.77
ABR-202ENST00000302538 LRRC75A-AS1Q8N1F1 130 aa10.27□□□□□ -0.77
ABR-202ENST00000302538 IL17DQ8TAD2 202 aa10.27□□□□□ -0.77
ABR-202ENST00000302538 MRPL53Q96EL3 112 aaKnown RBP10.27□□□□□ -0.77
ABR-202ENST00000302538 KLF12Q9Y4X4 402 aa10.27□□□□□ -0.77
ABR-202ENST00000302538 IGHV1-24A0A0C4DH33 117 aa10.27□□□□□ -0.77
ABR-202ENST00000302538 ZNF114Q8NC26 417 aa10.27□□□□□ -0.77
ABR-202ENST00000302538 ICOSQ9Y6W8 199 aa10.27□□□□□ -0.77
ABR-202ENST00000302538 DNAJC9-AS1A6NH13 148 aa10.27□□□□□ -0.77
ABR-202ENST00000302538 C11orf53Q8IXP5 236 aa10.27□□□□□ -0.77
ABR-202ENST00000302538 PTPRSQ13332 1948 aa10.26□□□□□ -0.77
ABR-202ENST00000302538 C19orf84I3L1E1 186 aa10.26□□□□□ -0.77
ABR-202ENST00000302538 IGHV4OR15-8A0A075B7B6 117 aa10.26□□□□□ -0.77
ABR-202ENST00000302538 A0A087WW49 117 aa10.26□□□□□ -0.77
ABR-202ENST00000302538 LOXL1Q08397 574 aaPredicted RBP10.26□□□□□ -0.77
ABR-202ENST00000302538 PYGO2Q9BRQ0 406 aa10.26□□□□□ -0.77
ABR-202ENST00000302538 IGHV7-81A0A0B4J1V7 117 aa10.26□□□□□ -0.77
ABR-202ENST00000302538 MRPL23Q16540 153 aaKnown RBP10.26□□□□□ -0.77
ABR-202ENST00000302538 FBXL19-AS1Q494R0 122 aa10.26□□□□□ -0.77
ABR-202ENST00000302538 BCL6BQ8N143 479 aaPredicted RBP10.26□□□□□ -0.77
ABR-202ENST00000302538 GFRA4Q9GZZ7 299 aa10.26□□□□□ -0.77
ABR-202ENST00000302538 SRCAPQ6ZRS2 3230 aa10.25□□□□□ -0.77
ABR-202ENST00000302538 ESM1Q9NQ30 184 aa10.25□□□□□ -0.77
ABR-202ENST00000302538 TMEM14CQ9P0S9 112 aa10.25□□□□□ -0.77
ABR-202ENST00000302538 PKIGQ9Y2B9 76 aa10.25□□□□□ -0.77
ABR-202ENST00000302538 PTPN13Q12923 2485 aa10.25□□□□□ -0.77
ABR-202ENST00000302538 KIAA1549LQ6ZVL6 1849 aa10.25□□□□□ -0.77
ABR-202ENST00000302538 CHAC1Q9BUX1 264 aa10.25□□□□□ -0.77
ABR-202ENST00000302538 PRSS46E5RG02 174 aa10.25□□□□□ -0.77
ABR-202ENST00000302538 DEFB135Q30KP9 77 aa10.24□□□□□ -0.77
ABR-202ENST00000302538 C2orf66Q6UXQ4 117 aa10.24□□□□□ -0.77
ABR-202ENST00000302538 ZNF491Q8N8L2 437 aa10.24□□□□□ -0.77
ABR-202ENST00000302538 TRAV26-2A0A0B4J265 109 aa10.24□□□□□ -0.77
ABR-202ENST00000302538 C16orf74Q96GX8 76 aa10.24□□□□□ -0.77
ABR-202ENST00000302538 ZNF492Q9P255 531 aa10.24□□□□□ -0.77
ABR-202ENST00000302538 A0A1B0GW64 132 aa10.23□□□□□ -0.77
ABR-202ENST00000302538 NEGR1Q7Z3B1 354 aa10.23□□□□□ -0.77
ABR-202ENST00000302538 C1orf147Q96MC9 270 aaPredicted RBP10.23□□□□□ -0.77
ABR-202ENST00000302538 PCDH15Q96QU1 1955 aa10.23□□□□□ -0.77
ABR-202ENST00000302538 ANKHD1Q8IWZ3 2542 aaKnown RBP10.23□□□□□ -0.77
ABR-202ENST00000302538 C10orf142B7Z368 130 aa10.23□□□□□ -0.77
ABR-202ENST00000302538 TMEM141Q96I45 108 aa10.23□□□□□ -0.77
ABR-202ENST00000302538 IGHV3-30P01768 117 aa10.23□□□□□ -0.77
ABR-202ENST00000302538 IGHV3-33P01772 117 aa10.23□□□□□ -0.77
ABR-202ENST00000302538 IGHV3-30-3P0DP02 117 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms