RNA–Protein interactions for RNA: ENST00000299565.9

CHRNA5-201, Transcript of cholinergic receptor nicotinic alpha 5 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA5, Length 3,623 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA5-201ENST00000299565 TRAV40A0A0B4J280 105 aa13.58□□□□□ -0.24
CHRNA5-201ENST00000299565 EFNA4P52798 201 aa13.57□□□□□ -0.24
CHRNA5-201ENST00000299565 LYPD1Q8N2G4 141 aa13.57□□□□□ -0.24
CHRNA5-201ENST00000299565 SAA4P35542 130 aa13.57□□□□□ -0.24
CHRNA5-201ENST00000299565 SRSF9Q13242 221 aaKnown RBP eCLIP13.57□□□□□ -0.24
CHRNA5-201ENST00000299565 FOXE3Q13461 319 aa13.57□□□□□ -0.24
CHRNA5-201ENST00000299565 ARL6IP6Q8N6S5 226 aa13.57□□□□□ -0.24
CHRNA5-201ENST00000299565 JKAMPQ9P055 326 aa13.57□□□□□ -0.24
CHRNA5-201ENST00000299565 LRRK2Q5S007 2527 aa13.57□□□□□ -0.24
CHRNA5-201ENST00000299565 SMIM13P0DJ93 91 aa13.57□□□□□ -0.24
CHRNA5-201ENST00000299565 SMIM17P0DL12 118 aa13.57□□□□□ -0.24
CHRNA5-201ENST00000299565 SMAD7O15105 426 aaKnown RBP13.56□□□□□ -0.24
CHRNA5-201ENST00000299565 MRGPRG-AS1Q2M3A8 158 aa13.56□□□□□ -0.24
CHRNA5-201ENST00000299565 LINC01545Q5VT33 79 aa13.56□□□□□ -0.24
CHRNA5-201ENST00000299565 CTSGP08311 255 aa13.56□□□□□ -0.24
CHRNA5-201ENST00000299565 TGFAP01135 160 aa13.56□□□□□ -0.24
CHRNA5-201ENST00000299565 ATP5G2Q06055 141 aa13.55□□□□□ -0.24
CHRNA5-201ENST00000299565 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.55□□□□□ -0.24
CHRNA5-201ENST00000299565 C8orf31Q8N9H6 132 aa13.55□□□□□ -0.24
CHRNA5-201ENST00000299565 SVEP1Q4LDE5 3571 aa13.55□□□□□ -0.24
CHRNA5-201ENST00000299565 LINC01548A6NM66 108 aa13.55□□□□□ -0.24
CHRNA5-201ENST00000299565 CDSNQ15517 529 aa13.55□□□□□ -0.24
CHRNA5-201ENST00000299565 BPESC1Q9GZL8 116 aa13.55□□□□□ -0.24
CHRNA5-201ENST00000299565 RNASE4P34096 147 aaKnown RBP13.54□□□□□ -0.24
CHRNA5-201ENST00000299565 RNF5Q99942 180 aa13.54□□□□□ -0.24
CHRNA5-201ENST00000299565 NAV2Q8IVL1 2488 aa13.54□□□□□ -0.24
CHRNA5-201ENST00000299565 LOC107984156A0A0G2JMH3 177 aa13.54□□□□□ -0.24
CHRNA5-201ENST00000299565 IGKCP01834 107 aa13.54□□□□□ -0.24
CHRNA5-201ENST00000299565 CRYGBP07316 175 aa13.54□□□□□ -0.24
CHRNA5-201ENST00000299565 TCF15Q12870 199 aa13.54□□□□□ -0.24
CHRNA5-201ENST00000299565 ARL17AQ8IVW1 177 aa13.54□□□□□ -0.24
CHRNA5-201ENST00000299565 C14orf178Q8N769 122 aaPredicted RBP13.54□□□□□ -0.24
CHRNA5-201ENST00000299565 TMEM8BA6NDV4 472 aa13.54□□□□□ -0.24
CHRNA5-201ENST00000299565 SEC11AP67812 179 aa13.54□□□□□ -0.24
CHRNA5-201ENST00000299565 DTX2Q86UW9 622 aa13.54□□□□□ -0.24
CHRNA5-201ENST00000299565 EEF1AKMT3Q96AZ1 226 aa13.54□□□□□ -0.24
CHRNA5-201ENST00000299565 ABCA2Q9BZC7 2435 aa13.53□□□□□ -0.24
CHRNA5-201ENST00000299565 PDE6HQ13956 83 aa13.53□□□□□ -0.24
CHRNA5-201ENST00000299565 HSD52Q0P140 79 aa13.53□□□□□ -0.24
CHRNA5-201ENST00000299565 NEGR1Q7Z3B1 354 aa13.53□□□□□ -0.24
CHRNA5-201ENST00000299565 CFHR4Q92496 578 aa13.53□□□□□ -0.24
CHRNA5-201ENST00000299565 JMJD8Q96S16 334 aa13.53□□□□□ -0.24
CHRNA5-201ENST00000299565 OR10J6PQ8NGY7 276 aa13.53□□□□□ -0.24
CHRNA5-201ENST00000299565 IGLV11-55A0A075B6I3 123 aa13.52□□□□□ -0.24
CHRNA5-201ENST00000299565 SCGB3A1Q96QR1 104 aa13.52□□□□□ -0.24
CHRNA5-201ENST00000299565 ABCA12Q86UK0 2595 aa13.52□□□□□ -0.24
CHRNA5-201ENST00000299565 ZFP36P26651 326 aaKnown RBP13.52□□□□□ -0.25
CHRNA5-201ENST00000299565 SAMD5Q5TGI4 173 aa13.52□□□□□ -0.25
CHRNA5-201ENST00000299565 Q6ZQT7 251 aa13.52□□□□□ -0.25
CHRNA5-201ENST00000299565 AGPAT4-IT1Q9H0P7 198 aa13.52□□□□□ -0.25
CHRNA5-201ENST00000299565 F6UB75 175 aa13.52□□□□□ -0.25
CHRNA5-201ENST00000299565 MRPL35Q9NZE8 188 aaKnown RBP13.52□□□□□ -0.25
CHRNA5-201ENST00000299565 IGHV7-81A0A0B4J1V7 117 aa13.51□□□□□ -0.25
CHRNA5-201ENST00000299565 H7C2G1 150 aa13.51□□□□□ -0.25
CHRNA5-201ENST00000299565 DPM2O94777 84 aa13.51□□□□□ -0.25
CHRNA5-201ENST00000299565 NXT2Q9NPJ8 142 aaKnown RBP13.51□□□□□ -0.25
CHRNA5-201ENST00000299565 NPIPB6E9PJ23 425 aa13.51□□□□□ -0.25
CHRNA5-201ENST00000299565 KHDC1LQ5JSQ8 128 aa13.51□□□□□ -0.25
CHRNA5-201ENST00000299565 CYSLTR1Q9Y271 337 aa13.51□□□□□ -0.25
CHRNA5-201ENST00000299565 OR11H12B2RN74 326 aa13.5□□□□□ -0.25
CHRNA5-201ENST00000299565 OR11H1Q8NG94 326 aa13.5□□□□□ -0.25
CHRNA5-201ENST00000299565 OR11H2Q8NH07 326 aa13.5□□□□□ -0.25
CHRNA5-201ENST00000299565 APOMO95445 188 aa13.5□□□□□ -0.25
CHRNA5-201ENST00000299565 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.49□□□□□ -0.25
CHRNA5-201ENST00000299565 RBX1P62877 108 aa13.49□□□□□ -0.25
CHRNA5-201ENST00000299565 AMTNQ6UX39 209 aa13.49□□□□□ -0.25
CHRNA5-201ENST00000299565 K7ENP7 123 aa13.49□□□□□ -0.25
CHRNA5-201ENST00000299565 LGALS9BQ3B8N2 356 aa13.49□□□□□ -0.25
CHRNA5-201ENST00000299565 LGALS9CQ6DKI2 356 aa13.49□□□□□ -0.25
CHRNA5-201ENST00000299565 CHAC1Q9BUX1 264 aa13.49□□□□□ -0.25
CHRNA5-201ENST00000299565 PPBPP02775 128 aa13.49□□□□□ -0.25
CHRNA5-201ENST00000299565 OR4X2Q8NGF9 303 aa13.49□□□□□ -0.25
CHRNA5-201ENST00000299565 AGRNO00468 2067 aa13.48□□□□□ -0.25
CHRNA5-201ENST00000299565 PAX8Q06710 450 aa13.48□□□□□ -0.25
CHRNA5-201ENST00000299565 CD300EQ496F6 205 aaPredicted RBP13.48□□□□□ -0.25
CHRNA5-201ENST00000299565 WI2-2373I1.2A0A1W2PRP0 233 aa13.48□□□□□ -0.25
CHRNA5-201ENST00000299565 TNFRSF13BO14836 293 aaPredicted RBP13.48□□□□□ -0.25
CHRNA5-201ENST00000299565 SCGB1C2P0DMR2 95 aa13.48□□□□□ -0.25
CHRNA5-201ENST00000299565 C8orf86Q6ZUL3 223 aa13.48□□□□□ -0.25
CHRNA5-201ENST00000299565 OR9G4Q8NGQ1 327 aa13.48□□□□□ -0.25
CHRNA5-201ENST00000299565 CRXO43186 299 aaPredicted RBP13.47□□□□□ -0.25
CHRNA5-201ENST00000299565 TTC9CQ8N5M4 171 aa13.47□□□□□ -0.25
CHRNA5-201ENST00000299565 ZNF256Q9Y2P7 627 aaPredicted RBP13.47□□□□□ -0.25
CHRNA5-201ENST00000299565 M0R1W7 72 aa13.47□□□□□ -0.25
CHRNA5-201ENST00000299565 ATP5LO75964 103 aa13.47□□□□□ -0.25
CHRNA5-201ENST00000299565 FXYD2P54710 66 aa13.47□□□□□ -0.25
CHRNA5-201ENST00000299565 KLRB1Q12918 225 aa13.47□□□□□ -0.25
CHRNA5-201ENST00000299565 LAGE3Q14657 143 aa13.46□□□□□ -0.25
CHRNA5-201ENST00000299565 OR11H6Q8NGC7 330 aa13.46□□□□□ -0.25
CHRNA5-201ENST00000299565 IGKV2D-26A0A0A0MRZ7 120 aa13.46□□□□□ -0.25
CHRNA5-201ENST00000299565 C9orf118A6NHY6 69 aa13.46□□□□□ -0.25
CHRNA5-201ENST00000299565 SLC50A1Q9BRV3 221 aa13.46□□□□□ -0.25
CHRNA5-201ENST00000299565 IGF1P05019 195 aa13.46□□□□□ -0.26
CHRNA5-201ENST00000299565 TMEM170BQ5T4T1 132 aa13.46□□□□□ -0.26
CHRNA5-201ENST00000299565 C2orf91Q6ZV80 131 aa13.45□□□□□ -0.26
CHRNA5-201ENST00000299565 Q8N9W7 124 aa13.45□□□□□ -0.26
CHRNA5-201ENST00000299565 SRSF8Q9BRL6 282 aaKnown RBP13.45□□□□□ -0.26
CHRNA5-201ENST00000299565 IGHV3-64A0A075B6Q5 118 aa13.45□□□□□ -0.26
CHRNA5-201ENST00000299565 A0A087WWL8 130 aa13.45□□□□□ -0.26
CHRNA5-201ENST00000299565 SMAD5-AS1Q9Y6J3 95 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms