RNA–Protein interactions for RNA: ENST00000298532.2

SNAPC4-201, Transcript of small nuclear RNA activating complex polypeptide 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC4, Length 5,010 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4-201ENST00000298532 TRAV26-2A0A0B4J265 109 aa13.12□□□□□ -0.31
SNAPC4-201ENST00000298532 IGLC1P0CG04 106 aa13.12□□□□□ -0.31
SNAPC4-201ENST00000298532 VWC2LB2RUY7 222 aa13.11□□□□□ -0.31
SNAPC4-201ENST00000298532 ZNF407Q9C0G0 2248 aa13.11□□□□□ -0.31
SNAPC4-201ENST00000298532 GAGE12JA6NER3 117 aa13.11□□□□□ -0.31
SNAPC4-201ENST00000298532 GAGE7O76087 117 aa13.11□□□□□ -0.31
SNAPC4-201ENST00000298532 GAGE12FP0CL80 117 aa13.11□□□□□ -0.31
SNAPC4-201ENST00000298532 GAGE12GP0CL81 117 aa13.11□□□□□ -0.31
SNAPC4-201ENST00000298532 GAGE12IP0CL82 117 aa13.11□□□□□ -0.31
SNAPC4-201ENST00000298532 CMC4P56277 68 aaPredicted RBP13.11□□□□□ -0.31
SNAPC4-201ENST00000298532 GAGE4Q13068 117 aa13.11□□□□□ -0.31
SNAPC4-201ENST00000298532 LINC01356Q8N9X3 169 aa13.11□□□□□ -0.31
SNAPC4-201ENST00000298532 SOCS3O14543 225 aa13.11□□□□□ -0.31
SNAPC4-201ENST00000298532 MORN5Q5VZ52 161 aa13.11□□□□□ -0.31
SNAPC4-201ENST00000298532 YLPM1P49750 1951 aaKnown RBP13.1□□□□□ -0.31
SNAPC4-201ENST00000298532 H3BUX3 64 aa13.1□□□□□ -0.31
SNAPC4-201ENST00000298532 MUC6Q6W4X9 2439 aa13.1□□□□□ -0.31
SNAPC4-201ENST00000298532 I3L3M4 83 aa13.1□□□□□ -0.31
SNAPC4-201ENST00000298532 COL8A2P25067 703 aa13.1□□□□□ -0.31
SNAPC4-201ENST00000298532 PCP2Q8IVA1 136 aa13.1□□□□□ -0.31
SNAPC4-201ENST00000298532 LTBP2Q14767 1821 aa13.1□□□□□ -0.31
SNAPC4-201ENST00000298532 FAM120AOSQ5T036 256 aa13.1□□□□□ -0.31
SNAPC4-201ENST00000298532 C20orf78Q9BR46 151 aa13.1□□□□□ -0.31
SNAPC4-201ENST00000298532 TEX48A0A1B0GUV7 120 aa13.09□□□□□ -0.31
SNAPC4-201ENST00000298532 OVOL3O00110 214 aa13.09□□□□□ -0.31
SNAPC4-201ENST00000298532 DKK1O94907 266 aa13.09□□□□□ -0.31
SNAPC4-201ENST00000298532 RHODO00212 210 aa13.09□□□□□ -0.31
SNAPC4-201ENST00000298532 NOTCH3Q9UM47 2321 aa13.09□□□□□ -0.31
SNAPC4-201ENST00000298532 J3QQQ9 107 aa13.08□□□□□ -0.31
SNAPC4-201ENST00000298532 INSP01308 110 aa13.08□□□□□ -0.31
SNAPC4-201ENST00000298532 PRR30Q53SZ7 412 aaPredicted RBP13.08□□□□□ -0.31
SNAPC4-201ENST00000298532 NDUFA12Q9UI09 145 aa13.08□□□□□ -0.31
SNAPC4-201ENST00000298532 LINC01545Q5VT33 79 aa13.08□□□□□ -0.32
SNAPC4-201ENST00000298532 C8orf86Q6ZUL3 223 aa13.08□□□□□ -0.32
SNAPC4-201ENST00000298532 TPSG1Q9NRR2 321 aa13.08□□□□□ -0.32
SNAPC4-201ENST00000298532 TTC28Q96AY4 2481 aa13.08□□□□□ -0.32
SNAPC4-201ENST00000298532 DUX4L9Q6RFH8 374 aaPredicted RBP13.08□□□□□ -0.32
SNAPC4-201ENST00000298532 IGFL2Q6UWQ7 119 aa13.07□□□□□ -0.32
SNAPC4-201ENST00000298532 CITED1Q99966 193 aa13.07□□□□□ -0.32
SNAPC4-201ENST00000298532 PLXND1Q9Y4D7 1925 aa13.07□□□□□ -0.32
SNAPC4-201ENST00000298532 ANAPC1Q9H1A4 1944 aa13.07□□□□□ -0.32
SNAPC4-201ENST00000298532 IGHV3-53P01767 116 aa13.07□□□□□ -0.32
SNAPC4-201ENST00000298532 SCRT2Q9NQ03 307 aa13.07□□□□□ -0.32
SNAPC4-201ENST00000298532 DKK4Q9UBT3 224 aa13.07□□□□□ -0.32
SNAPC4-201ENST00000298532 PLXNA2O75051 1894 aa13.07□□□□□ -0.32
SNAPC4-201ENST00000298532 ATP6V0E1O15342 81 aa13.07□□□□□ -0.32
SNAPC4-201ENST00000298532 CARD19Q96LW7 228 aa13.07□□□□□ -0.32
SNAPC4-201ENST00000298532 LOXP28300 417 aaPredicted RBP13.06□□□□□ -0.32
SNAPC4-201ENST00000298532 SAA4P35542 130 aa13.06□□□□□ -0.32
SNAPC4-201ENST00000298532 GAGE5Q13069 117 aa13.06□□□□□ -0.32
SNAPC4-201ENST00000298532 GAGE6Q13070 117 aa13.06□□□□□ -0.32
SNAPC4-201ENST00000298532 NTN5Q8WTR8 489 aaPredicted RBP13.06□□□□□ -0.32
SNAPC4-201ENST00000298532 HELZP42694 1942 aaKnown RBP13.06□□□□□ -0.32
SNAPC4-201ENST00000298532 SAP30O75446 220 aa13.06□□□□□ -0.32
SNAPC4-201ENST00000298532 ANXA2RQ3ZCQ2 193 aa13.06□□□□□ -0.32
SNAPC4-201ENST00000298532 TEX36Q5VZQ5 186 aa13.06□□□□□ -0.32
SNAPC4-201ENST00000298532 BRD3OSQ6XYD6 125 aa13.06□□□□□ -0.32
SNAPC4-201ENST00000298532 TRBV25-1A0A075B6N4 114 aa13.06□□□□□ -0.32
SNAPC4-201ENST00000298532 Q6ZSR3 168 aa13.06□□□□□ -0.32
SNAPC4-201ENST00000298532 PIP4P2Q8N4L2 257 aa13.06□□□□□ -0.32
SNAPC4-201ENST00000298532 E7EQL1 145 aa13.05□□□□□ -0.32
SNAPC4-201ENST00000298532 C15orf53Q8NAA6 179 aa13.05□□□□□ -0.32
SNAPC4-201ENST00000298532 IGLL5B9A064 214 aa13.05□□□□□ -0.32
SNAPC4-201ENST00000298532 ARFGEF3Q5TH69 2177 aa13.05□□□□□ -0.32
SNAPC4-201ENST00000298532 ANKRD39Q53RE8 183 aa13.05□□□□□ -0.32
SNAPC4-201ENST00000298532 SHISA9B4DS77 424 aa13.04□□□□□ -0.32
SNAPC4-201ENST00000298532 COL6A6A6NMZ7 2263 aa13.04□□□□□ -0.32
SNAPC4-201ENST00000298532 K7EMI3 77 aa13.04□□□□□ -0.32
SNAPC4-201ENST00000298532 ZNF491Q8N8L2 437 aa13.04□□□□□ -0.32
SNAPC4-201ENST00000298532 LINC00173Q6ZV60 143 aa13.04□□□□□ -0.32
SNAPC4-201ENST00000298532 SH2D6Q7Z4S9 175 aa13.04□□□□□ -0.32
SNAPC4-201ENST00000298532 CFC1BP0CG36 223 aa13.03□□□□□ -0.32
SNAPC4-201ENST00000298532 CFC1P0CG37 223 aa13.03□□□□□ -0.32
SNAPC4-201ENST00000298532 PRSS29PA6NIE9 313 aa13.03□□□□□ -0.32
SNAPC4-201ENST00000298532 TAX1BP3O14907 124 aa13.03□□□□□ -0.32
SNAPC4-201ENST00000298532 IGLV1-44P01699 117 aa13.03□□□□□ -0.32
SNAPC4-201ENST00000298532 B5MCH6 92 aa13.03□□□□□ -0.32
SNAPC4-201ENST00000298532 KNCNA6PVL3 124 aa13.02□□□□□ -0.32
SNAPC4-201ENST00000298532 FOXI2Q6ZQN5 318 aa13.02□□□□□ -0.32
SNAPC4-201ENST00000298532 ZNF493Q6ZR52 646 aa13.02□□□□□ -0.32
SNAPC4-201ENST00000298532 ANKRD29Q8N6D5 301 aa13.02□□□□□ -0.32
SNAPC4-201ENST00000298532 IGHV1OR15-1A0A075B7D0 117 aa13.02□□□□□ -0.32
SNAPC4-201ENST00000298532 LY6HO94772 140 aa13.02□□□□□ -0.33
SNAPC4-201ENST00000298532 TRACP01848 142 aa13.02□□□□□ -0.33
SNAPC4-201ENST00000298532 IGHG4P01861 327 aa13.02□□□□□ -0.33
SNAPC4-201ENST00000298532 EGR2P11161 476 aaPredicted RBP13.02□□□□□ -0.33
SNAPC4-201ENST00000298532 UBE2E1P51965 193 aa13.02□□□□□ -0.33
SNAPC4-201ENST00000298532 SS18Q15532 418 aa13.02□□□□□ -0.33
SNAPC4-201ENST00000298532 IGF2BP2-AS1Q96M15 143 aa13.02□□□□□ -0.33
SNAPC4-201ENST00000298532 UBL5Q9BZL1 73 aa13.02□□□□□ -0.33
SNAPC4-201ENST00000298532 SPANXCQ9NY87 97 aa13.02□□□□□ -0.33
SNAPC4-201ENST00000298532 TECTAO75443 2155 aa13.02□□□□□ -0.33
SNAPC4-201ENST00000298532 IGLV3-9A0A075B6K5 115 aa13.01□□□□□ -0.33
SNAPC4-201ENST00000298532 J3QLI3 93 aa13.01□□□□□ -0.33
SNAPC4-201ENST00000298532 C17orf77Q96MU5 243 aa13.01□□□□□ -0.33
SNAPC4-201ENST00000298532 NOTCH4Q99466 2003 aa13.01□□□□□ -0.33
SNAPC4-201ENST00000298532 SPINK13Q1W4C9 94 aa13.01□□□□□ -0.33
SNAPC4-201ENST00000298532 DEFB131AP59861 70 aa13□□□□□ -0.33
SNAPC4-201ENST00000298532 DIAPH2-AS1Q14236 149 aa13□□□□□ -0.33
SNAPC4-201ENST00000298532 UBE2E2Q96LR5 201 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms