RNA–Protein interactions for RNA: ENST00000298396.6

SSX3-201, Transcript of SSX family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX3, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-201ENST00000298396 NMBP08949 121 aa4.27□□□□□ -1.73
SSX3-201ENST00000298396 PMS2P11Q13670 270 aa4.27□□□□□ -1.73
SSX3-201ENST00000298396 SPINK13Q1W4C9 94 aa4.27□□□□□ -1.73
SSX3-201ENST00000298396 EIF5AL1Q6IS14 154 aaKnown RBP4.27□□□□□ -1.73
SSX3-201ENST00000298396 EBLN2Q6P2I7 272 aa4.27□□□□□ -1.73
SSX3-201ENST00000298396 GOLT1AQ6ZVE7 132 aa4.27□□□□□ -1.73
SSX3-201ENST00000298396 C1orf158Q8N1D5 194 aa4.27□□□□□ -1.73
SSX3-201ENST00000298396 ZFAND2AQ8N6M9 145 aa4.27□□□□□ -1.73
SSX3-201ENST00000298396 C5orf17Q8NAS9 161 aa4.27□□□□□ -1.73
SSX3-201ENST00000298396 Q8TAT8 98 aa4.27□□□□□ -1.73
SSX3-201ENST00000298396 RNF183Q96D59 192 aa4.27□□□□□ -1.73
SSX3-201ENST00000298396 SGK494Q96LW2 274 aa4.27□□□□□ -1.73
SSX3-201ENST00000298396 LINC00479Q96M42 142 aa4.27□□□□□ -1.73
SSX3-201ENST00000298396 CSTL1Q9H114 145 aa4.27□□□□□ -1.73
SSX3-201ENST00000298396 AAMDCQ9H7C9 122 aa4.27□□□□□ -1.73
SSX3-201ENST00000298396 XCL2Q9UBD3 114 aa4.27□□□□□ -1.73
SSX3-201ENST00000298396 EPDR1Q9UM22 224 aa4.27□□□□□ -1.73
SSX3-201ENST00000298396 RPH3ALQ9UNE2 315 aa4.27□□□□□ -1.73
SSX3-201ENST00000298396 ARL2-SNX15V9GYD0 113 aa4.27□□□□□ -1.73
SSX3-201ENST00000298396 DNAH6Q9C0G6 4158 aa4.27□□□□□ -1.73
SSX3-201ENST00000298396 ALMS1Q8TCU4 4167 aa4.26□□□□□ -1.73
SSX3-201ENST00000298396 DNAH1Q9P2D7 4330 aa4.26□□□□□ -1.73
SSX3-201ENST00000298396 TRAV34A0A0B4J273 112 aa4.26□□□□□ -1.73
SSX3-201ENST00000298396 LOC102723971A0A1B0GUV8 181 aa4.26□□□□□ -1.73
SSX3-201ENST00000298396 RBAKDNA6NC62 111 aa4.26□□□□□ -1.73
SSX3-201ENST00000298396 KLLNB2CW77 178 aa4.26□□□□□ -1.73
SSX3-201ENST00000298396 TEX46H3BTG2 121 aa4.26□□□□□ -1.73
SSX3-201ENST00000298396 PEX7O00628 323 aa4.26□□□□□ -1.73
SSX3-201ENST00000298396 DUSP14O95147 198 aaKnown RBP4.26□□□□□ -1.73
SSX3-201ENST00000298396 CRISP2P16562 243 aa4.26□□□□□ -1.73
SSX3-201ENST00000298396 APOC4P55056 127 aa4.26□□□□□ -1.73
SSX3-201ENST00000298396 GFI1BQ5VTD9 330 aa4.26□□□□□ -1.73
SSX3-201ENST00000298396 MORN3Q6PF18 240 aaPredicted RBP4.26□□□□□ -1.73
SSX3-201ENST00000298396 Q6ZWC4 215 aa4.26□□□□□ -1.73
SSX3-201ENST00000298396 ARL6IP6Q8N6S5 226 aa4.26□□□□□ -1.73
SSX3-201ENST00000298396 OR10J6PQ8NGY7 276 aa4.26□□□□□ -1.73
SSX3-201ENST00000298396 C2CD4CQ8TF44 421 aa4.26□□□□□ -1.73
SSX3-201ENST00000298396 ODF3Q96PU9 254 aa4.26□□□□□ -1.73
SSX3-201ENST00000298396 RARRES2Q99969 163 aa4.26□□□□□ -1.73
SSX3-201ENST00000298396 PPP1R14DQ9NXH3 145 aa4.26□□□□□ -1.73
SSX3-201ENST00000298396 ZNF492Q9P255 531 aa4.26□□□□□ -1.73
SSX3-201ENST00000298396 GNG13Q9P2W3 67 aa4.26□□□□□ -1.73
SSX3-201ENST00000298396 TENM2Q9NT68 2774 aa4.26□□□□□ -1.73
SSX3-201ENST00000298396 C11orf94C9JXX5 98 aa4.25□□□□□ -1.73
SSX3-201ENST00000298396 J3KRW8 73 aa4.25□□□□□ -1.73
SSX3-201ENST00000298396 UBE2CO00762 179 aa4.25□□□□□ -1.73
SSX3-201ENST00000298396 HBE1P02100 147 aa4.25□□□□□ -1.73
SSX3-201ENST00000298396 BCL2P10415 239 aa4.25□□□□□ -1.73
SSX3-201ENST00000298396 ZNF80P51504 273 aaPredicted RBP4.25□□□□□ -1.73
SSX3-201ENST00000298396 ZNF138P52744 262 aa4.25□□□□□ -1.73
SSX3-201ENST00000298396 BLOC1S1P78537 153 aa4.25□□□□□ -1.73
SSX3-201ENST00000298396 BTN1A1Q13410 526 aa4.25□□□□□ -1.73
SSX3-201ENST00000298396 CST9LP1Q5W188 147 aa4.25□□□□□ -1.73
SSX3-201ENST00000298396 ZNF705AQ6ZN79 300 aaPredicted RBP4.25□□□□□ -1.73
SSX3-201ENST00000298396 Q86TA4 180 aa4.25□□□□□ -1.73
SSX3-201ENST00000298396 Q8N1X5 172 aa4.25□□□□□ -1.73
SSX3-201ENST00000298396 CYB561D1Q8N8Q1 229 aa4.25□□□□□ -1.73
SSX3-201ENST00000298396 TMEM75Q8N9X5 138 aa4.25□□□□□ -1.73
SSX3-201ENST00000298396 Q8NAQ8 132 aa4.25□□□□□ -1.73
SSX3-201ENST00000298396 RXFP4Q8TDU9 374 aa4.25□□□□□ -1.73
SSX3-201ENST00000298396 C11orf52Q96A22 123 aa4.25□□□□□ -1.73
SSX3-201ENST00000298396 IGF2BP2-AS1Q96M15 143 aa4.25□□□□□ -1.73
SSX3-201ENST00000298396 LINC00477Q96M19 166 aa4.25□□□□□ -1.73
SSX3-201ENST00000298396 ATG101Q9BSB4 218 aa4.25□□□□□ -1.73
SSX3-201ENST00000298396 DERL1Q9BUN8 251 aa4.25□□□□□ -1.73
SSX3-201ENST00000298396 MANBALQ9NQG1 85 aa4.25□□□□□ -1.73
SSX3-201ENST00000298396 TP53TG1Q9Y2A0 90 aa4.25□□□□□ -1.73
SSX3-201ENST00000298396 KLF12Q9Y4X4 402 aa4.25□□□□□ -1.73
SSX3-201ENST00000298396 TRBV20OR9-2A0A075B6H5 130 aa4.24□□□□□ -1.73
SSX3-201ENST00000298396 A0A087WWL8 130 aa4.24□□□□□ -1.73
SSX3-201ENST00000298396 PLAC8L1A1L4L8 177 aa4.24□□□□□ -1.73
SSX3-201ENST00000298396 C9JQL5 133 aa4.24□□□□□ -1.73
SSX3-201ENST00000298396 F6UZH7 168 aa4.24□□□□□ -1.73
SSX3-201ENST00000298396 SPRY2O43597 315 aa4.24□□□□□ -1.73
SSX3-201ENST00000298396 ZNF324O75467 553 aaPredicted RBP4.24□□□□□ -1.73
SSX3-201ENST00000298396 IFNA7P01567 189 aa4.24□□□□□ -1.73
SSX3-201ENST00000298396 IGLV2-8P01709 118 aa4.24□□□□□ -1.73
SSX3-201ENST00000298396 LEPP41159 167 aa4.24□□□□□ -1.73
SSX3-201ENST00000298396 CDKN1BP46527 198 aa4.24□□□□□ -1.73
SSX3-201ENST00000298396 CSN1S1P47710 185 aa4.24□□□□□ -1.73
SSX3-201ENST00000298396 MEF2BQ02080 365 aaPredicted RBP4.24□□□□□ -1.73
SSX3-201ENST00000298396 ZNF506Q5JVG8 444 aa4.24□□□□□ -1.73
SSX3-201ENST00000298396 TMEM78Q5T7P6 136 aa4.24□□□□□ -1.73
SSX3-201ENST00000298396 ZNF575Q86XF7 245 aa4.24□□□□□ -1.73
SSX3-201ENST00000298396 OR11H2Q8NH07 326 aa4.24□□□□□ -1.73
SSX3-201ENST00000298396 CMTM2Q8TAZ6 248 aa4.24□□□□□ -1.73
SSX3-201ENST00000298396 RCHY1Q96PM5 261 aa4.24□□□□□ -1.73
SSX3-201ENST00000298396 NKX6-2Q9C056 277 aaPredicted RBP4.24□□□□□ -1.73
SSX3-201ENST00000298396 C11orf21Q9P2W6 132 aa4.24□□□□□ -1.73
SSX3-201ENST00000298396 PSG8Q9UQ74 426 aa4.24□□□□□ -1.73
SSX3-201ENST00000298396 TRAV12-3A0A0B4J271 114 aa4.23□□□□□ -1.73
SSX3-201ENST00000298396 IGHV4-28A0A0C4DH34 117 aa4.23□□□□□ -1.73
SSX3-201ENST00000298396 TRBV7-9A0A0J9YWB2 115 aa4.23□□□□□ -1.73
SSX3-201ENST00000298396 TRBV6-1A0A0K0K1D8 114 aa4.23□□□□□ -1.73
SSX3-201ENST00000298396 SERTM2A0A1B0GWG4 89 aa4.23□□□□□ -1.73
SSX3-201ENST00000298396 C7orf71A4D174 169 aa4.23□□□□□ -1.73
SSX3-201ENST00000298396 RBFOX3A6NFN3 312 aa4.23□□□□□ -1.73
SSX3-201ENST00000298396 ZNF705GA8MUZ8 300 aaPredicted RBP4.23□□□□□ -1.73
SSX3-201ENST00000298396 DEFB4AO15263 64 aa4.23□□□□□ -1.73
SSX3-201ENST00000298396 INSP01308 110 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms