RNA–Protein interactions for RNA: ENST00000297316.4

SOX17-201, Transcript of SRY-box 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOX17, Length 2,342 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX17-201ENST00000297316 C20orf144Q9BQM9 153 aa16.23■□□□□ 0.19
SOX17-201ENST00000297316 TMSB15BA0A087X1C1 80 aa16.22■□□□□ 0.19
SOX17-201ENST00000297316 LY6G6DO95868 133 aa16.22■□□□□ 0.19
SOX17-201ENST00000297316 FOXA3P55318 350 aaPredicted RBP16.22■□□□□ 0.19
SOX17-201ENST00000297316 SAPCD1Q5SSQ6 148 aa16.22■□□□□ 0.19
SOX17-201ENST00000297316 ZNF124Q15973 351 aa16.21■□□□□ 0.19
SOX17-201ENST00000297316 KCNS1Q96KK3 526 aa16.21■□□□□ 0.19
SOX17-201ENST00000297316 C20orf173Q96LM9 149 aa16.21■□□□□ 0.19
SOX17-201ENST00000297316 VAMP8Q9BV40 100 aa16.21■□□□□ 0.19
SOX17-201ENST00000297316 IGHV4OR15-8A0A075B7B6 117 aa16.2■□□□□ 0.18
SOX17-201ENST00000297316 A0A087WW49 117 aa16.2■□□□□ 0.18
SOX17-201ENST00000297316 AMTP48728 403 aa16.2■□□□□ 0.18
SOX17-201ENST00000297316 KRTDAPP60985 99 aa16.2■□□□□ 0.18
SOX17-201ENST00000297316 TCTEX1D4Q5JR98 221 aa16.2■□□□□ 0.18
SOX17-201ENST00000297316 FAM162BQ5T6X4 162 aa16.2■□□□□ 0.18
SOX17-201ENST00000297316 IGKV3-7A0A075B6H7 116 aa16.2■□□□□ 0.18
SOX17-201ENST00000297316 A0A1W2PS18 150 aa16.2■□□□□ 0.18
SOX17-201ENST00000297316 LGALS1P09382 135 aaKnown RBP16.2■□□□□ 0.18
SOX17-201ENST00000297316 ARMS2P0C7Q2 107 aa16.2■□□□□ 0.18
SOX17-201ENST00000297316 DEFB136Q30KP8 78 aa16.2■□□□□ 0.18
SOX17-201ENST00000297316 RNF152Q8N8N0 203 aa16.2■□□□□ 0.18
SOX17-201ENST00000297316 MIEN1Q9BRT3 115 aa16.2■□□□□ 0.18
SOX17-201ENST00000297316 RHPN1-AS1Q9BWJ2 59 aa16.2■□□□□ 0.18
SOX17-201ENST00000297316 DAZ1Q9NQZ3 744 aaKnown RBP16.2■□□□□ 0.18
SOX17-201ENST00000297316 IGHV7-4-1A0A0J9YVY3 117 aa16.19■□□□□ 0.18
SOX17-201ENST00000297316 UBE2E2Q96LR5 201 aa16.19■□□□□ 0.18
SOX17-201ENST00000297316 AGPAT4-IT1Q9H0P7 198 aa16.19■□□□□ 0.18
SOX17-201ENST00000297316 NRN1Q9NPD7 142 aa16.19■□□□□ 0.18
SOX17-201ENST00000297316 PMCHP20382 165 aa16.19■□□□□ 0.18
SOX17-201ENST00000297316 FAM106AQ4KMX7 169 aa16.19■□□□□ 0.18
SOX17-201ENST00000297316 FBLL1A6NHQ2 334 aaKnown RBP16.18■□□□□ 0.18
SOX17-201ENST00000297316 ZNF575Q86XF7 245 aa16.18■□□□□ 0.18
SOX17-201ENST00000297316 Q8N976 141 aa16.18■□□□□ 0.18
SOX17-201ENST00000297316 C18orf32Q8TCD1 76 aa16.18■□□□□ 0.18
SOX17-201ENST00000297316 C16orf92Q96LL3 132 aa16.18■□□□□ 0.18
SOX17-201ENST00000297316 SRD5A1P18405 259 aa16.18■□□□□ 0.18
SOX17-201ENST00000297316 ALKBH7Q9BT30 221 aaPredicted RBP16.18■□□□□ 0.18
SOX17-201ENST00000297316 TPPP3Q9BW30 176 aa16.18■□□□□ 0.18
SOX17-201ENST00000297316 TMEM189A5PLL7 270 aa16.17■□□□□ 0.18
SOX17-201ENST00000297316 RBAKDNA6NC62 111 aa16.17■□□□□ 0.18
SOX17-201ENST00000297316 HAX1O00165 279 aa16.17■□□□□ 0.18
SOX17-201ENST00000297316 RPL11P62913 178 aaKnown RBP16.17■□□□□ 0.18
SOX17-201ENST00000297316 SOCS3O14543 225 aa16.17■□□□□ 0.18
SOX17-201ENST00000297316 SYNJ2BPP57105 145 aa16.17■□□□□ 0.18
SOX17-201ENST00000297316 MRPL53Q96EL3 112 aaKnown RBP16.17■□□□□ 0.18
SOX17-201ENST00000297316 SMPXQ9UHP9 88 aa16.17■□□□□ 0.18
SOX17-201ENST00000297316 ZNF324O75467 553 aaPredicted RBP16.16■□□□□ 0.18
SOX17-201ENST00000297316 KHDC1LQ5JSQ8 128 aa16.16■□□□□ 0.18
SOX17-201ENST00000297316 DUX3Q96PT4 197 aa16.16■□□□□ 0.18
SOX17-201ENST00000297316 HIVEP1P15822 2718 aa16.16■□□□□ 0.18
SOX17-201ENST00000297316 TMEM213A2RRL7 107 aa16.16■□□□□ 0.18
SOX17-201ENST00000297316 DEFB1P60022 68 aa16.16■□□□□ 0.18
SOX17-201ENST00000297316 C11orf44Q8N8P7 122 aa16.16■□□□□ 0.18
SOX17-201ENST00000297316 A0A1B0GUT8 65 aa16.15■□□□□ 0.18
SOX17-201ENST00000297316 HOXD3P31249 432 aaPredicted RBP16.15■□□□□ 0.18
SOX17-201ENST00000297316 FLNBO75369 2602 aaKnown RBP16.15■□□□□ 0.18
SOX17-201ENST00000297316 G0S2P27469 103 aa16.14■□□□□ 0.18
SOX17-201ENST00000297316 FAM19A2Q8N3H0 131 aa16.14■□□□□ 0.18
SOX17-201ENST00000297316 NDFIP1Q9BT67 221 aa16.14■□□□□ 0.18
SOX17-201ENST00000297316 LYZL1Q6UWQ5 148 aa16.14■□□□□ 0.17
SOX17-201ENST00000297316 MRPL52Q86TS9 123 aaKnown RBP16.14■□□□□ 0.17
SOX17-201ENST00000297316 MUC21A0A0G2JKD1 596 aa16.13■□□□□ 0.17
SOX17-201ENST00000297316 MUC21A0A140T8X8 626 aa16.13■□□□□ 0.17
SOX17-201ENST00000297316 K7EMT4 169 aa16.13■□□□□ 0.17
SOX17-201ENST00000297316 MUC21Q5SSG8 566 aa16.13■□□□□ 0.17
SOX17-201ENST00000297316 NIT1Q86X76 327 aa16.13■□□□□ 0.17
SOX17-201ENST00000297316 SLURP1P55000 103 aa16.13■□□□□ 0.17
SOX17-201ENST00000297316 TMEM160Q9NX00 188 aa16.13■□□□□ 0.17
SOX17-201ENST00000297316 RNASE1P07998 156 aaKnown RBP16.12■□□□□ 0.17
SOX17-201ENST00000297316 KLF5Q13887 457 aaPredicted RBP16.12■□□□□ 0.17
SOX17-201ENST00000297316 Q6ZQT7 251 aa16.12■□□□□ 0.17
SOX17-201ENST00000297316 C9orf47Q6ZRZ4 202 aa16.12■□□□□ 0.17
SOX17-201ENST00000297316 ZNF738Q8NE65 137 aa16.12■□□□□ 0.17
SOX17-201ENST00000297316 UFC1Q9Y3C8 167 aa16.12■□□□□ 0.17
SOX17-201ENST00000297316 SETXQ7Z333 2677 aaKnown RBP16.12■□□□□ 0.17
SOX17-201ENST00000297316 C3orf79P0CE67 100 aa16.12■□□□□ 0.17
SOX17-201ENST00000297316 BMI1P35226 326 aa16.12■□□□□ 0.17
SOX17-201ENST00000297316 ZNF138P52744 262 aa16.12■□□□□ 0.17
SOX17-201ENST00000297316 TMEM78Q5T7P6 136 aa16.12■□□□□ 0.17
SOX17-201ENST00000297316 NTF3P20783 257 aa16.11■□□□□ 0.17
SOX17-201ENST00000297316 C11orf21Q9P2W6 132 aa16.11■□□□□ 0.17
SOX17-201ENST00000297316 LOC102724200A0A096LPH7 203 aaPredicted RBP16.11■□□□□ 0.17
SOX17-201ENST00000297316 CTRLP40313 264 aa16.11■□□□□ 0.17
SOX17-201ENST00000297316 RIGQ13278 110 aa16.11■□□□□ 0.17
SOX17-201ENST00000297316 Q6AWC8 147 aa16.11■□□□□ 0.17
SOX17-201ENST00000297316 NSD1Q96L73 2696 aaPredicted RBP16.1■□□□□ 0.17
SOX17-201ENST00000297316 FABP5P3A8MUU1 101 aa16.1■□□□□ 0.17
SOX17-201ENST00000297316 ORM1P02763 201 aa16.1■□□□□ 0.17
SOX17-201ENST00000297316 SRSF2Q01130 221 aaKnown RBP16.1■□□□□ 0.17
SOX17-201ENST00000297316 SPATA45Q537H7 98 aa16.1■□□□□ 0.17
SOX17-201ENST00000297316 ZNF418Q8TF45 676 aaPredicted RBP16.1■□□□□ 0.17
SOX17-201ENST00000297316 URB1-AS1Q96HZ7 61 aa16.1■□□□□ 0.17
SOX17-201ENST00000297316 WNK1Q9H4A3 2382 aa16.1■□□□□ 0.17
SOX17-201ENST00000297316 M0QZ24 198 aa16.1■□□□□ 0.17
SOX17-201ENST00000297316 ZNF25P17030 456 aaPredicted RBP16.1■□□□□ 0.17
SOX17-201ENST00000297316 HILS1P60008 231 aa16.1■□□□□ 0.17
SOX17-201ENST00000297316 KLHL30-AS1Q8NEE0 82 aa16.1■□□□□ 0.17
SOX17-201ENST00000297316 OR11H1Q8NG94 326 aa16.1■□□□□ 0.17
SOX17-201ENST00000297316 INAFM1C9JVW0 142 aa16.09■□□□□ 0.17
SOX17-201ENST00000297316 PRR9Q5T870 116 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 92.2 ms