RNA–Protein interactions for RNA: ENST00000297265.4

CHMP4C-201, Transcript of charged multivesicular body protein 4C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4C, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4C-201ENST00000297265 SYNJ2BPP57105 145 aa10.25□□□□□ -0.77
CHMP4C-201ENST00000297265 LYZL1Q6UWQ5 148 aa10.25□□□□□ -0.77
CHMP4C-201ENST00000297265 YAE1D1Q9NRH1 226 aa10.25□□□□□ -0.77
CHMP4C-201ENST00000297265 OTOGQ6ZRI0 2925 aa10.25□□□□□ -0.77
CHMP4C-201ENST00000297265 MTORP42345 2549 aa10.24□□□□□ -0.77
CHMP4C-201ENST00000297265 IGKV3D-20A0A0C4DH25 116 aa10.24□□□□□ -0.77
CHMP4C-201ENST00000297265 IGLC6P0CF74 106 aa10.24□□□□□ -0.77
CHMP4C-201ENST00000297265 RPL11P62913 178 aaKnown RBP10.24□□□□□ -0.77
CHMP4C-201ENST00000297265 KLF5Q13887 457 aaPredicted RBP10.24□□□□□ -0.77
CHMP4C-201ENST00000297265 TMEM78Q5T7P6 136 aa10.24□□□□□ -0.77
CHMP4C-201ENST00000297265 PRR9Q5T870 116 aa10.24□□□□□ -0.77
CHMP4C-201ENST00000297265 ADAMTSL5Q6ZMM2 481 aa10.24□□□□□ -0.77
CHMP4C-201ENST00000297265 ZNF738Q8NE65 137 aa10.24□□□□□ -0.77
CHMP4C-201ENST00000297265 TMEM18Q96B42 140 aa10.24□□□□□ -0.77
CHMP4C-201ENST00000297265 NDFIP1Q9BT67 221 aa10.24□□□□□ -0.77
CHMP4C-201ENST00000297265 LINC01559Q495D7 138 aa10.23□□□□□ -0.77
CHMP4C-201ENST00000297265 Q6AWC8 147 aa10.23□□□□□ -0.77
CHMP4C-201ENST00000297265 HIST2H2BDQ6DRA6 164 aa10.23□□□□□ -0.77
CHMP4C-201ENST00000297265 BAGE3Q86Y29 109 aa10.23□□□□□ -0.77
CHMP4C-201ENST00000297265 FAM19A4Q96LR4 140 aa10.23□□□□□ -0.77
CHMP4C-201ENST00000297265 F6UB75 175 aa10.23□□□□□ -0.77
CHMP4C-201ENST00000297265 JOSD1Q15040 202 aaPredicted RBP10.23□□□□□ -0.77
CHMP4C-201ENST00000297265 IQCJQ1A5X6 159 aa10.23□□□□□ -0.77
CHMP4C-201ENST00000297265 DEFB136Q30KP8 78 aa10.23□□□□□ -0.77
CHMP4C-201ENST00000297265 ZFAND2AQ8N6M9 145 aa10.23□□□□□ -0.77
CHMP4C-201ENST00000297265 LINC00477Q96M19 166 aa10.23□□□□□ -0.77
CHMP4C-201ENST00000297265 LENEPQ9Y5L5 61 aa10.23□□□□□ -0.77
CHMP4C-201ENST00000297265 ZNF493Q6ZR52 646 aa10.22□□□□□ -0.77
CHMP4C-201ENST00000297265 URB1-AS1Q96HZ7 61 aa10.22□□□□□ -0.77
CHMP4C-201ENST00000297265 SMR3AQ99954 134 aa10.22□□□□□ -0.77
CHMP4C-201ENST00000297265 LOC102724200A0A096LPH7 203 aaPredicted RBP10.21□□□□□ -0.77
CHMP4C-201ENST00000297265 OVOL1O14753 267 aa10.21□□□□□ -0.77
CHMP4C-201ENST00000297265 ORM1P02763 201 aa10.21□□□□□ -0.77
CHMP4C-201ENST00000297265 CTRLP40313 264 aa10.21□□□□□ -0.77
CHMP4C-201ENST00000297265 RIGQ13278 110 aa10.21□□□□□ -0.77
CHMP4C-201ENST00000297265 TPPP3Q9BW30 176 aa10.21□□□□□ -0.77
CHMP4C-201ENST00000297265 MS4A6AQ9H2W1 248 aa10.21□□□□□ -0.77
CHMP4C-201ENST00000297265 C2orf70A6NJV1 201 aa10.21□□□□□ -0.78
CHMP4C-201ENST00000297265 PCP4L1A6NKN8 68 aa10.21□□□□□ -0.78
CHMP4C-201ENST00000297265 GPX1P07203 203 aa10.21□□□□□ -0.78
CHMP4C-201ENST00000297265 SLURP1P55000 103 aa10.21□□□□□ -0.78
CHMP4C-201ENST00000297265 RPS20P60866 119 aaKnown RBP10.21□□□□□ -0.78
CHMP4C-201ENST00000297265 HIST1H1AQ02539 215 aaPredicted RBP10.21□□□□□ -0.78
CHMP4C-201ENST00000297265 OR8A1Q8NGG7 326 aa10.21□□□□□ -0.78
CHMP4C-201ENST00000297265 CNFNQ9BYD5 112 aa10.21□□□□□ -0.78
CHMP4C-201ENST00000297265 MUC21A0A0G2JKD1 596 aa10.2□□□□□ -0.78
CHMP4C-201ENST00000297265 MUC21A0A140T8X8 626 aa10.2□□□□□ -0.78
CHMP4C-201ENST00000297265 A0A1B0GW15 77 aa10.2□□□□□ -0.78
CHMP4C-201ENST00000297265 CD33P20138 364 aa10.2□□□□□ -0.78
CHMP4C-201ENST00000297265 PAFAH1B2P68402 229 aa10.2□□□□□ -0.78
CHMP4C-201ENST00000297265 KIR3DS1Q14943 382 aa10.2□□□□□ -0.78
CHMP4C-201ENST00000297265 MUC21Q5SSG8 566 aa10.2□□□□□ -0.78
CHMP4C-201ENST00000297265 APRG1Q8IVJ8 170 aa10.2□□□□□ -0.78
CHMP4C-201ENST00000297265 C4orf3Q8WVX3 66 aa10.2□□□□□ -0.78
CHMP4C-201ENST00000297265 Q6ZWC4 215 aa10.19□□□□□ -0.78
CHMP4C-201ENST00000297265 WFDC3Q8IUB2 231 aa10.19□□□□□ -0.78
CHMP4C-201ENST00000297265 FER1L6-AS1Q8NA97 138 aa10.19□□□□□ -0.78
CHMP4C-201ENST00000297265 OR11H1Q8NG94 326 aa10.19□□□□□ -0.78
CHMP4C-201ENST00000297265 OR10J6PQ8NGY7 276 aa10.19□□□□□ -0.78
CHMP4C-201ENST00000297265 DUX3Q96PT4 197 aa10.19□□□□□ -0.78
CHMP4C-201ENST00000297265 GSN-AS1Q9NRJ2 163 aa10.19□□□□□ -0.78
CHMP4C-201ENST00000297265 RNF114Q9Y508 228 aa10.19□□□□□ -0.78
CHMP4C-201ENST00000297265 K7EQG2 157 aa10.19□□□□□ -0.78
CHMP4C-201ENST00000297265 NTF3P20783 257 aa10.19□□□□□ -0.78
CHMP4C-201ENST00000297265 SSTP61278 116 aa10.19□□□□□ -0.78
CHMP4C-201ENST00000297265 DNLZQ5SXM8 178 aa10.19□□□□□ -0.78
CHMP4C-201ENST00000297265 KCNS1Q96KK3 526 aa10.19□□□□□ -0.78
CHMP4C-201ENST00000297265 MSRB1Q9NZV6 116 aa10.19□□□□□ -0.78
CHMP4C-201ENST00000297265 SORL1Q92673 2214 aa10.19□□□□□ -0.78
CHMP4C-201ENST00000297265 NOTCH2Q04721 2471 aa10.18□□□□□ -0.78
CHMP4C-201ENST00000297265 RNASE1P07998 156 aaKnown RBP10.18□□□□□ -0.78
CHMP4C-201ENST00000297265 TMEM160Q9NX00 188 aa10.18□□□□□ -0.78
CHMP4C-201ENST00000297265 LINC01619G3V211 115 aa10.17□□□□□ -0.78
CHMP4C-201ENST00000297265 TRBV7-9A0A0J9YWB2 115 aa10.17□□□□□ -0.78
CHMP4C-201ENST00000297265 ZNF324O75467 553 aaPredicted RBP10.17□□□□□ -0.78
CHMP4C-201ENST00000297265 TFPI2P48307 235 aa10.17□□□□□ -0.78
CHMP4C-201ENST00000297265 FAM104BQ5XKR9 115 aa10.17□□□□□ -0.78
CHMP4C-201ENST00000297265 NIT1Q86X76 327 aa10.17□□□□□ -0.78
CHMP4C-201ENST00000297265 FAM19A2Q8N3H0 131 aa10.17□□□□□ -0.78
CHMP4C-201ENST00000297265 OR1N2Q8NGR9 330 aa10.17□□□□□ -0.78
CHMP4C-201ENST00000297265 J3KRW8 73 aa10.16□□□□□ -0.78
CHMP4C-201ENST00000297265 M0QZ24 198 aa10.16□□□□□ -0.78
CHMP4C-201ENST00000297265 ZNF688P0C7X2 276 aa10.16□□□□□ -0.78
CHMP4C-201ENST00000297265 ID1P41134 155 aa10.16□□□□□ -0.78
CHMP4C-201ENST00000297265 SAMD13Q5VXD3 122 aa10.16□□□□□ -0.78
CHMP4C-201ENST00000297265 AMN1Q8IY45 258 aa10.16□□□□□ -0.78
CHMP4C-201ENST00000297265 LINC01006Q8NI28 216 aa10.16□□□□□ -0.78
CHMP4C-201ENST00000297265 DLX4Q92988 240 aaPredicted RBP10.16□□□□□ -0.78
CHMP4C-201ENST00000297265 AGRNO00468 2067 aa10.16□□□□□ -0.78
CHMP4C-201ENST00000297265 KLLNB2CW77 178 aa10.15□□□□□ -0.78
CHMP4C-201ENST00000297265 BORCS7Q96B45 105 aa10.15□□□□□ -0.78
CHMP4C-201ENST00000297265 C16orf95Q9H693 158 aa10.15□□□□□ -0.78
CHMP4C-201ENST00000297265 U3KQK5 164 aa10.15□□□□□ -0.78
CHMP4C-201ENST00000297265 SETD2Q9BYW2 2564 aaPredicted RBP10.15□□□□□ -0.78
CHMP4C-201ENST00000297265 LY6G6DO95868 133 aa10.15□□□□□ -0.79
CHMP4C-201ENST00000297265 AMTP48728 403 aa10.15□□□□□ -0.79
CHMP4C-201ENST00000297265 HILS1P60008 231 aa10.15□□□□□ -0.79
CHMP4C-201ENST00000297265 TWIST1Q15672 202 aa10.15□□□□□ -0.79
CHMP4C-201ENST00000297265 KLHL30-AS1Q8NEE0 82 aa10.15□□□□□ -0.79
CHMP4C-201ENST00000297265 OR9G4Q8NGQ1 327 aa10.15□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 571.8 ms