RNA–Protein interactions for RNA: ENST00000275954.3

TMEM47-201, Transcript of transmembrane protein 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM47, Length 4,054 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM47-201ENST00000275954 PRR25Q96S07 402 aa11.28□□□□□ -0.6
TMEM47-201ENST00000275954 TRAV12-3A0A0B4J271 114 aa11.28□□□□□ -0.6
TMEM47-201ENST00000275954 STPG4Q8N801 248 aa11.28□□□□□ -0.6
TMEM47-201ENST00000275954 JMJD8Q96S16 334 aa11.28□□□□□ -0.6
TMEM47-201ENST00000275954 I3L2K1 104 aa11.27□□□□□ -0.6
TMEM47-201ENST00000275954 J3QR89 54 aa11.27□□□□□ -0.6
TMEM47-201ENST00000275954 PDE6HQ13956 83 aa11.27□□□□□ -0.6
TMEM47-201ENST00000275954 FAM110DQ8TAY7 271 aaPredicted RBP11.27□□□□□ -0.6
TMEM47-201ENST00000275954 TRBV7-1A0A0A6YYK4 115 aa11.27□□□□□ -0.61
TMEM47-201ENST00000275954 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.27□□□□□ -0.61
TMEM47-201ENST00000275954 PRSS22Q9GZN4 317 aa11.27□□□□□ -0.61
TMEM47-201ENST00000275954 COL4A2P08572 1712 aa11.27□□□□□ -0.61
TMEM47-201ENST00000275954 IGHV1-69DA0A0B4J2H0 117 aa11.27□□□□□ -0.61
TMEM47-201ENST00000275954 ATP5LO75964 103 aa11.27□□□□□ -0.61
TMEM47-201ENST00000275954 IGHV1-69P01742 117 aa11.27□□□□□ -0.61
TMEM47-201ENST00000275954 NUTF2P61970 127 aaKnown RBP11.27□□□□□ -0.61
TMEM47-201ENST00000275954 PRSS57Q6UWY2 283 aa11.26□□□□□ -0.61
TMEM47-201ENST00000275954 C8orf31Q8N9H6 132 aa11.26□□□□□ -0.61
TMEM47-201ENST00000275954 TEX15Q9BXT5 2789 aa11.26□□□□□ -0.61
TMEM47-201ENST00000275954 IGKV3OR2-268A0A0C4DH90 116 aa11.26□□□□□ -0.61
TMEM47-201ENST00000275954 TEX22C9J3V5 150 aa11.26□□□□□ -0.61
TMEM47-201ENST00000275954 PPBPP02775 128 aa11.26□□□□□ -0.61
TMEM47-201ENST00000275954 GP9P14770 177 aa11.26□□□□□ -0.61
TMEM47-201ENST00000275954 TMEM95Q3KNT9 176 aa11.26□□□□□ -0.61
TMEM47-201ENST00000275954 LDLRAD2Q5SZI1 272 aa11.26□□□□□ -0.61
TMEM47-201ENST00000275954 NXT2Q9NPJ8 142 aaKnown RBP11.26□□□□□ -0.61
TMEM47-201ENST00000275954 ZNF492Q9P255 531 aa11.26□□□□□ -0.61
TMEM47-201ENST00000275954 COA6Q5JTJ3 125 aaKnown RBP11.25□□□□□ -0.61
TMEM47-201ENST00000275954 OR11H6Q8NGC7 330 aa11.25□□□□□ -0.61
TMEM47-201ENST00000275954 IGHV7-81A0A0B4J1V7 117 aa11.25□□□□□ -0.61
TMEM47-201ENST00000275954 PSMB11A5LHX3 300 aa11.25□□□□□ -0.61
TMEM47-201ENST00000275954 PRSS46E5RG02 174 aa11.25□□□□□ -0.61
TMEM47-201ENST00000275954 FABP2P12104 132 aa11.25□□□□□ -0.61
TMEM47-201ENST00000275954 SYNJ2BPP57105 145 aa11.25□□□□□ -0.61
TMEM47-201ENST00000275954 GTSCR1Q86UQ5 136 aa11.25□□□□□ -0.61
TMEM47-201ENST00000275954 RAX2Q96IS3 184 aa11.25□□□□□ -0.61
TMEM47-201ENST00000275954 DUX3Q96PT4 197 aa11.25□□□□□ -0.61
TMEM47-201ENST00000275954 IGKV1D-37A0A075B6S9 117 aa11.25□□□□□ -0.61
TMEM47-201ENST00000275954 HOXB4P17483 251 aaPredicted RBP11.25□□□□□ -0.61
TMEM47-201ENST00000275954 LRBAP50851 2863 aa11.25□□□□□ -0.61
TMEM47-201ENST00000275954 A0A1W2PPR1 153 aa11.25□□□□□ -0.61
TMEM47-201ENST00000275954 H3BUT2 72 aa11.25□□□□□ -0.61
TMEM47-201ENST00000275954 IGHV3-73A0A0B4J1V6 119 aa11.24□□□□□ -0.61
TMEM47-201ENST00000275954 IGHV4-38-2P0DP08 117 aa11.24□□□□□ -0.61
TMEM47-201ENST00000275954 PIP4P2Q8N4L2 257 aa11.24□□□□□ -0.61
TMEM47-201ENST00000275954 C8orf86Q6ZUL3 223 aa11.24□□□□□ -0.61
TMEM47-201ENST00000275954 C9orf139Q6ZV77 190 aa11.24□□□□□ -0.61
TMEM47-201ENST00000275954 TMEM158Q8WZ71 300 aa11.24□□□□□ -0.61
TMEM47-201ENST00000275954 F6UB75 175 aa11.24□□□□□ -0.61
TMEM47-201ENST00000275954 PF4P02776 101 aa11.24□□□□□ -0.61
TMEM47-201ENST00000275954 IGLL1P15814 213 aa11.24□□□□□ -0.61
TMEM47-201ENST00000275954 TMEM14CQ9P0S9 112 aa11.24□□□□□ -0.61
TMEM47-201ENST00000275954 TRAV26-2A0A0B4J265 109 aa11.23□□□□□ -0.61
TMEM47-201ENST00000275954 BLCAPP62952 87 aa11.23□□□□□ -0.61
TMEM47-201ENST00000275954 C2orf88Q9BSF0 95 aa11.23□□□□□ -0.61
TMEM47-201ENST00000275954 A0A087WWL8 130 aa11.23□□□□□ -0.61
TMEM47-201ENST00000275954 LTAP01374 205 aa11.23□□□□□ -0.61
TMEM47-201ENST00000275954 EMP1P54849 157 aa11.23□□□□□ -0.61
TMEM47-201ENST00000275954 LINC01587Q99440 93 aa11.23□□□□□ -0.61
TMEM47-201ENST00000275954 ST20Q9HBF5 79 aa11.23□□□□□ -0.61
TMEM47-201ENST00000275954 OVOL1O14753 267 aa11.23□□□□□ -0.61
TMEM47-201ENST00000275954 FAM104BQ5XKR9 115 aa11.23□□□□□ -0.61
TMEM47-201ENST00000275954 DYNAPQ8N1N2 210 aa11.23□□□□□ -0.61
TMEM47-201ENST00000275954 ITPR2Q14571 2701 aa11.22□□□□□ -0.61
TMEM47-201ENST00000275954 ADAMTS20P59510 1910 aa11.22□□□□□ -0.61
TMEM47-201ENST00000275954 CRYBG3Q68DQ2 2970 aa11.22□□□□□ -0.61
TMEM47-201ENST00000275954 IGHV1-24A0A0C4DH33 117 aa11.22□□□□□ -0.61
TMEM47-201ENST00000275954 SRSF1Q07955 248 aaKnown RBP eCLIP11.22□□□□□ -0.61
TMEM47-201ENST00000275954 NHP2Q9NX24 153 aaKnown RBP11.22□□□□□ -0.61
TMEM47-201ENST00000275954 CTSGP08311 255 aa11.22□□□□□ -0.61
TMEM47-201ENST00000275954 CT83Q5H943 113 aa11.22□□□□□ -0.61
TMEM47-201ENST00000275954 LINC00173Q6ZV60 143 aa11.22□□□□□ -0.61
TMEM47-201ENST00000275954 C20orf144Q9BQM9 153 aa11.22□□□□□ -0.61
TMEM47-201ENST00000275954 GFRA4Q9GZZ7 299 aa11.22□□□□□ -0.61
TMEM47-201ENST00000275954 IGLC2P0DOY2 106 aa11.22□□□□□ -0.61
TMEM47-201ENST00000275954 IGLC3P0DOY3 106 aa11.22□□□□□ -0.61
TMEM47-201ENST00000275954 EGR2P11161 476 aaPredicted RBP11.22□□□□□ -0.61
TMEM47-201ENST00000275954 DEFB113Q30KQ7 82 aa11.22□□□□□ -0.61
TMEM47-201ENST00000275954 MRPL51Q4U2R6 128 aaKnown RBP11.22□□□□□ -0.61
TMEM47-201ENST00000275954 LINC01356Q8N9X3 169 aa11.22□□□□□ -0.61
TMEM47-201ENST00000275954 SMIM12Q96EX1 92 aa11.22□□□□□ -0.61
TMEM47-201ENST00000275954 IGF2BP2-AS1Q96M15 143 aa11.22□□□□□ -0.61
TMEM47-201ENST00000275954 K7ERU9 68 aa11.21□□□□□ -0.61
TMEM47-201ENST00000275954 APOMO95445 188 aa11.21□□□□□ -0.61
TMEM47-201ENST00000275954 SMR3AQ99954 134 aa11.21□□□□□ -0.61
TMEM47-201ENST00000275954 PEF1Q9UBV8 284 aaKnown RBP11.21□□□□□ -0.61
TMEM47-201ENST00000275954 NPIPB6E9PJ23 425 aa11.21□□□□□ -0.61
TMEM47-201ENST00000275954 TNFRSF6BO95407 300 aa11.21□□□□□ -0.61
TMEM47-201ENST00000275954 DEFB1P60022 68 aa11.21□□□□□ -0.61
TMEM47-201ENST00000275954 GTSF1Q8WW33 167 aa11.21□□□□□ -0.61
TMEM47-201ENST00000275954 MSRB1Q9NZV6 116 aa11.21□□□□□ -0.61
TMEM47-201ENST00000275954 PTPRBP23467 1997 aa11.21□□□□□ -0.61
TMEM47-201ENST00000275954 CENPVL3A0A0U1RRI6 287 aa11.21□□□□□ -0.62
TMEM47-201ENST00000275954 CD300EQ496F6 205 aaPredicted RBP11.21□□□□□ -0.62
TMEM47-201ENST00000275954 ZC2HC1BQ5TFG8 222 aa11.21□□□□□ -0.62
TMEM47-201ENST00000275954 TTC9CQ8N5M4 171 aa11.21□□□□□ -0.62
TMEM47-201ENST00000275954 DPM2O94777 84 aa11.2□□□□□ -0.62
TMEM47-201ENST00000275954 LINC00322Q6ZN03 302 aaPredicted RBP11.2□□□□□ -0.62
TMEM47-201ENST00000275954 Q8N9W7 124 aa11.2□□□□□ -0.62
TMEM47-201ENST00000275954 LINC00574Q9H8X3 128 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms