RNA–Protein interactions for RNA: ENST00000274071.6

PDGFC-201, Transcript of platelet derived growth factor C, humanhuman

TSL 1 (best)

Gene PDGFC, Length 2,987 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-201ENST00000274071 LINC01600Q96MT4 127 aa7.18□□□□□ -1.26
PDGFC-201ENST00000274071 SPANXCQ9NY87 97 aa7.18□□□□□ -1.26
PDGFC-201ENST00000274071 GNG12Q9UBI6 72 aa7.18□□□□□ -1.26
PDGFC-201ENST00000274071 WNT9BO14905 357 aa7.17□□□□□ -1.26
PDGFC-201ENST00000274071 ORM1P02763 201 aa7.17□□□□□ -1.26
PDGFC-201ENST00000274071 ELANEP08246 267 aa7.17□□□□□ -1.26
PDGFC-201ENST00000274071 DTX2Q86UW9 622 aa7.17□□□□□ -1.26
PDGFC-201ENST00000274071 LINC00477Q96M19 166 aa7.17□□□□□ -1.26
PDGFC-201ENST00000274071 ZNF71Q9NQZ8 489 aaPredicted RBP7.17□□□□□ -1.26
PDGFC-201ENST00000274071 OVOL1O14753 267 aa7.17□□□□□ -1.26
PDGFC-201ENST00000274071 CRYGAP11844 174 aa7.17□□□□□ -1.26
PDGFC-201ENST00000274071 ZNF22P17026 224 aaPredicted RBP7.17□□□□□ -1.26
PDGFC-201ENST00000274071 LINC01620Q4KN68 170 aa7.17□□□□□ -1.26
PDGFC-201ENST00000274071 Q8N8P6 123 aa7.17□□□□□ -1.26
PDGFC-201ENST00000274071 RNF185Q96GF1 192 aa7.17□□□□□ -1.26
PDGFC-201ENST00000274071 VKORC1Q9BQB6 163 aa7.17□□□□□ -1.26
PDGFC-201ENST00000274071 IMUPQ9GZP8 106 aa7.17□□□□□ -1.26
PDGFC-201ENST00000274071 MRPL36Q9P0J6 103 aaKnown RBP7.17□□□□□ -1.26
PDGFC-201ENST00000274071 F8VRH5 84 aa7.17□□□□□ -1.26
PDGFC-201ENST00000274071 CRYGBP07316 175 aa7.17□□□□□ -1.26
PDGFC-201ENST00000274071 GATA1P15976 413 aaPredicted RBP7.17□□□□□ -1.26
PDGFC-201ENST00000274071 FOLR3P41439 243 aa7.17□□□□□ -1.26
PDGFC-201ENST00000274071 KLHL30-AS1Q8NEE0 82 aa7.17□□□□□ -1.26
PDGFC-201ENST00000274071 CYSTM1Q9H1C7 97 aa7.17□□□□□ -1.26
PDGFC-201ENST00000274071 METRNQ9UJH8 293 aa7.17□□□□□ -1.26
PDGFC-201ENST00000274071 FAM240AA0A1B0GVK7 77 aa7.16□□□□□ -1.26
PDGFC-201ENST00000274071 H7C1H1 209 aa7.16□□□□□ -1.26
PDGFC-201ENST00000274071 CRYGDP07320 174 aa7.16□□□□□ -1.26
PDGFC-201ENST00000274071 COX6B1P14854 86 aa7.16□□□□□ -1.26
PDGFC-201ENST00000274071 COX7CP15954 63 aa7.16□□□□□ -1.26
PDGFC-201ENST00000274071 SLC25A39Q9BZJ4 359 aaPredicted RBP7.16□□□□□ -1.26
PDGFC-201ENST00000274071 OTORQ9NRC9 128 aa7.16□□□□□ -1.26
PDGFC-201ENST00000274071 ZNF318Q5VUA4 2279 aa7.16□□□□□ -1.26
PDGFC-201ENST00000274071 FREM1Q5H8C1 2179 aa7.16□□□□□ -1.26
PDGFC-201ENST00000274071 GRPP07492 148 aa7.16□□□□□ -1.26
PDGFC-201ENST00000274071 ZNF883P0CG24 379 aa7.16□□□□□ -1.26
PDGFC-201ENST00000274071 CCL3P10147 92 aa7.16□□□□□ -1.26
PDGFC-201ENST00000274071 SLC25A16P16260 332 aa7.16□□□□□ -1.26
PDGFC-201ENST00000274071 RPS19BP1Q86WX3 136 aaKnown RBP7.16□□□□□ -1.26
PDGFC-201ENST00000274071 MSRB1Q9NZV6 116 aa7.16□□□□□ -1.26
PDGFC-201ENST00000274071 IGLV2-18A0A075B6J9 118 aa7.15□□□□□ -1.26
PDGFC-201ENST00000274071 TRBV6-1A0A0K0K1D8 114 aa7.15□□□□□ -1.26
PDGFC-201ENST00000274071 TRBV10-2A0A0K0K1G8 114 aa7.15□□□□□ -1.26
PDGFC-201ENST00000274071 UPK2O00526 184 aa7.15□□□□□ -1.26
PDGFC-201ENST00000274071 IGHV3-30P01768 117 aa7.15□□□□□ -1.26
PDGFC-201ENST00000274071 IGHV3-30-5P0DP03 117 aa7.15□□□□□ -1.26
PDGFC-201ENST00000274071 CCL11P51671 97 aa7.15□□□□□ -1.26
PDGFC-201ENST00000274071 C2orf48Q96LS8 159 aa7.15□□□□□ -1.26
PDGFC-201ENST00000274071 PCNX2A6NKB5 2137 aa7.15□□□□□ -1.26
PDGFC-201ENST00000274071 TRAV17A0A0B4J275 112 aa7.15□□□□□ -1.27
PDGFC-201ENST00000274071 A0A0J9YY99 117 aa7.15□□□□□ -1.27
PDGFC-201ENST00000274071 hADV29S1A0JD25 119 aa7.15□□□□□ -1.27
PDGFC-201ENST00000274071 AHCTF1Q8WYP5 2266 aa7.15□□□□□ -1.27
PDGFC-201ENST00000274071 IGHV4-39P01824 125 aa7.14□□□□□ -1.27
PDGFC-201ENST00000274071 EDN2P20800 178 aa7.14□□□□□ -1.27
PDGFC-201ENST00000274071 ATXN8Q156A1 80 aa7.14□□□□□ -1.27
PDGFC-201ENST00000274071 C8orf49Q96NF6 230 aa7.14□□□□□ -1.27
PDGFC-201ENST00000274071 CXCL13O43927 109 aa7.14□□□□□ -1.27
PDGFC-201ENST00000274071 SEC61GP60059 68 aa7.14□□□□□ -1.27
PDGFC-201ENST00000274071 RUSC1-AS1Q66K80 236 aa7.14□□□□□ -1.27
PDGFC-201ENST00000274071 ZNF826PQ6ZT77 177 aa7.14□□□□□ -1.27
PDGFC-201ENST00000274071 CXorf67Q86X51 503 aaPredicted RBP7.14□□□□□ -1.27
PDGFC-201ENST00000274071 ZCCHC24Q8N2G6 241 aaKnown RBP7.14□□□□□ -1.27
PDGFC-201ENST00000274071 LEAP2Q969E1 77 aa7.14□□□□□ -1.27
PDGFC-201ENST00000274071 PRR25Q96S07 402 aa7.14□□□□□ -1.27
PDGFC-201ENST00000274071 E7EUB6 86 aa7.14□□□□□ -1.27
PDGFC-201ENST00000274071 H7C2G1 150 aa7.14□□□□□ -1.27
PDGFC-201ENST00000274071 EIF4EBP3O60516 100 aaPredicted RBP7.14□□□□□ -1.27
PDGFC-201ENST00000274071 IGHV3-33P01772 117 aa7.14□□□□□ -1.27
PDGFC-201ENST00000274071 P0DMU3 169 aa7.14□□□□□ -1.27
PDGFC-201ENST00000274071 FAM231AP0DMU4 169 aa7.14□□□□□ -1.27
PDGFC-201ENST00000274071 FAM231CP0DMU5 169 aa7.14□□□□□ -1.27
PDGFC-201ENST00000274071 LIFP15018 202 aa7.14□□□□□ -1.27
PDGFC-201ENST00000274071 LOXL3P58215 753 aa7.14□□□□□ -1.27
PDGFC-201ENST00000274071 EDDM3AQ14507 147 aa7.14□□□□□ -1.27
PDGFC-201ENST00000274071 SIGLEC15Q6ZMC9 328 aa7.14□□□□□ -1.27
PDGFC-201ENST00000274071 Q6ZS46 218 aa7.14□□□□□ -1.27
PDGFC-201ENST00000274071 TMEM75Q8N9X5 138 aa7.14□□□□□ -1.27
PDGFC-201ENST00000274071 THAP8Q8NA92 274 aa7.14□□□□□ -1.27
PDGFC-201ENST00000274071 JPT2Q9H910 190 aa7.14□□□□□ -1.27
PDGFC-201ENST00000274071 TRAV12-1A0A0B4J245 112 aa7.13□□□□□ -1.27
PDGFC-201ENST00000274071 PRDX2P32119 198 aa7.13□□□□□ -1.27
PDGFC-201ENST00000274071 Q0VFX4 171 aa7.13□□□□□ -1.27
PDGFC-201ENST00000274071 TCF15Q12870 199 aa7.13□□□□□ -1.27
PDGFC-201ENST00000274071 DSCR8Q96T75 97 aa7.13□□□□□ -1.27
PDGFC-201ENST00000274071 PRO0628Q9UI54 55 aa7.13□□□□□ -1.27
PDGFC-201ENST00000274071 RPUSD1Q9UJJ7 312 aaKnown RBP7.13□□□□□ -1.27
PDGFC-201ENST00000274071 COL27A1Q8IZC6 1860 aaPredicted RBP7.13□□□□□ -1.27
PDGFC-201ENST00000274071 TRAV41A0A0B4J266 112 aa7.13□□□□□ -1.27
PDGFC-201ENST00000274071 TINCRA0A1B0GVN0 87 aa7.13□□□□□ -1.27
PDGFC-201ENST00000274071 TRACP01848 142 aa7.13□□□□□ -1.27
PDGFC-201ENST00000274071 IGKV1-16P04430 117 aa7.13□□□□□ -1.27
PDGFC-201ENST00000274071 LAGE3Q14657 143 aa7.13□□□□□ -1.27
PDGFC-201ENST00000274071 C2orf82Q6UX34 121 aa7.13□□□□□ -1.27
PDGFC-201ENST00000274071 FAM19A4Q96LR4 140 aa7.13□□□□□ -1.27
PDGFC-201ENST00000274071 ZNF256Q9Y2P7 627 aaPredicted RBP7.13□□□□□ -1.27
PDGFC-201ENST00000274071 SAA2P0DJI9 122 aaPredicted RBP7.12□□□□□ -1.27
PDGFC-201ENST00000274071 CD59P13987 128 aa7.12□□□□□ -1.27
PDGFC-201ENST00000274071 ERHP84090 104 aaKnown RBP7.12□□□□□ -1.27
PDGFC-201ENST00000274071 PLA2G2CQ5R387 149 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 107.2 ms