RNA–Protein interactions for RNA: ENST00000269397.8

CBX4-201, Transcript of chromobox 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CBX4, Length 2,664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-201ENST00000269397 C15orf32Q32M92 178 aa21.21■□□□□ 0.99
CBX4-201ENST00000269397 UFC1Q9Y3C8 167 aa21.21■□□□□ 0.99
CBX4-201ENST00000269397 CLEC3BP05452 202 aa21.2■□□□□ 0.98
CBX4-201ENST00000269397 SMIM17P0DL12 118 aa21.2■□□□□ 0.98
CBX4-201ENST00000269397 ZNF207O43670 478 aaKnown RBP21.2■□□□□ 0.98
CBX4-201ENST00000269397 TMEM11P17152 192 aa21.2■□□□□ 0.98
CBX4-201ENST00000269397 LINC01559Q495D7 138 aa21.2■□□□□ 0.98
CBX4-201ENST00000269397 MRPL35Q9NZE8 188 aaKnown RBP21.2■□□□□ 0.98
CBX4-201ENST00000269397 AGRNO00468 2067 aa21.19■□□□□ 0.98
CBX4-201ENST00000269397 LINC01546A6NGU7 62 aa21.19■□□□□ 0.98
CBX4-201ENST00000269397 DPM2O94777 84 aa21.19■□□□□ 0.98
CBX4-201ENST00000269397 ZFHX3Q15911 3703 aa21.19■□□□□ 0.98
CBX4-201ENST00000269397 AGPAT4-IT1Q9H0P7 198 aa21.18■□□□□ 0.98
CBX4-201ENST00000269397 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa21.18■□□□□ 0.98
CBX4-201ENST00000269397 MAPKAPK5-AS1Q8N8E1 139 aa21.18■□□□□ 0.98
CBX4-201ENST00000269397 Q8N8P6 123 aa21.18■□□□□ 0.98
CBX4-201ENST00000269397 IGLV2-18A0A075B6J9 118 aa21.17■□□□□ 0.98
CBX4-201ENST00000269397 BUB3O43684 328 aa21.17■□□□□ 0.98
CBX4-201ENST00000269397 PIFOQ8TCI5 191 aa21.17■□□□□ 0.98
CBX4-201ENST00000269397 SRSF2Q01130 221 aaKnown RBP21.17■□□□□ 0.98
CBX4-201ENST00000269397 TMEM238C9JI98 176 aa21.16■□□□□ 0.98
CBX4-201ENST00000269397 TIMD4Q96H15 378 aa21.16■□□□□ 0.98
CBX4-201ENST00000269397 HIGD1BQ9P298 99 aa21.16■□□□□ 0.98
CBX4-201ENST00000269397 EFNA4P52798 201 aa21.16■□□□□ 0.98
CBX4-201ENST00000269397 Q8N6K4 173 aa21.16■□□□□ 0.98
CBX4-201ENST00000269397 TEX48A0A1B0GUV7 120 aa21.15■□□□□ 0.98
CBX4-201ENST00000269397 SCGB2A1O75556 95 aa21.15■□□□□ 0.98
CBX4-201ENST00000269397 M0R1W7 72 aa21.15■□□□□ 0.98
CBX4-201ENST00000269397 PHLDA1Q8WV24 401 aaPredicted RBP21.15■□□□□ 0.98
CBX4-201ENST00000269397 ZFAND3Q9H8U3 227 aa21.15■□□□□ 0.98
CBX4-201ENST00000269397 VKORC1Q9BQB6 163 aa21.14■□□□□ 0.98
CBX4-201ENST00000269397 SPRY2O43597 315 aa21.14■□□□□ 0.97
CBX4-201ENST00000269397 CDSNQ15517 529 aa21.14■□□□□ 0.97
CBX4-201ENST00000269397 CLEC19AQ6UXS0 136 aa21.14■□□□□ 0.97
CBX4-201ENST00000269397 CEND1Q8N111 149 aa21.14■□□□□ 0.97
CBX4-201ENST00000269397 ATP5LO75964 103 aa21.13■□□□□ 0.97
CBX4-201ENST00000269397 CCDC144NLQ6NUI1 221 aa21.13■□□□□ 0.97
CBX4-201ENST00000269397 Q8N9W7 124 aa21.13■□□□□ 0.97
CBX4-201ENST00000269397 ZNF502Q8TBZ5 544 aa21.13■□□□□ 0.97
CBX4-201ENST00000269397 AKAP6Q13023 2319 aa21.13■□□□□ 0.97
CBX4-201ENST00000269397 MSRB2Q9Y3D2 182 aa21.12■□□□□ 0.97
CBX4-201ENST00000269397 PTPRQQ9UMZ3 2332 aa21.12■□□□□ 0.97
CBX4-201ENST00000269397 NRACQ8N912 160 aa21.12■□□□□ 0.97
CBX4-201ENST00000269397 MYOZ3Q8TDC0 251 aa21.12■□□□□ 0.97
CBX4-201ENST00000269397 CLPSL1A2RUU4 121 aa21.12■□□□□ 0.97
CBX4-201ENST00000269397 J3KRW8 73 aa21.12■□□□□ 0.97
CBX4-201ENST00000269397 IGHV7-4-1A0A0J9YVY3 117 aa21.11■□□□□ 0.97
CBX4-201ENST00000269397 LAGE3Q14657 143 aa21.11■□□□□ 0.97
CBX4-201ENST00000269397 LINC01548A6NM66 108 aa21.11■□□□□ 0.97
CBX4-201ENST00000269397 G3V318 75 aa21.11■□□□□ 0.97
CBX4-201ENST00000269397 ZFP36P26651 326 aaKnown RBP21.11■□□□□ 0.97
CBX4-201ENST00000269397 KLK15Q9H2R5 256 aa21.11■□□□□ 0.97
CBX4-201ENST00000269397 ATP6V0E1O15342 81 aa21.1■□□□□ 0.97
CBX4-201ENST00000269397 TRAV8-2A0A0B4J237 113 aa21.1■□□□□ 0.97
CBX4-201ENST00000269397 TMEM78Q5T7P6 136 aa21.1■□□□□ 0.97
CBX4-201ENST00000269397 SPANXN1Q5VSR9 72 aa21.1■□□□□ 0.97
CBX4-201ENST00000269397 SMPXQ9UHP9 88 aa21.09■□□□□ 0.97
CBX4-201ENST00000269397 TM2D2Q9BX73 214 aa21.09■□□□□ 0.97
CBX4-201ENST00000269397 CCDC140Q96MF4 163 aa21.08■□□□□ 0.97
CBX4-201ENST00000269397 GOSR1O95249 250 aa21.08■□□□□ 0.96
CBX4-201ENST00000269397 ATRXP46100 2492 aa21.07■□□□□ 0.96
CBX4-201ENST00000269397 H3BVH4 76 aa21.07■□□□□ 0.96
CBX4-201ENST00000269397 MTURNQ8N3F0 131 aa21.07■□□□□ 0.96
CBX4-201ENST00000269397 CELSR1Q9NYQ6 3014 aa21.06■□□□□ 0.96
CBX4-201ENST00000269397 RBAKDNA6NC62 111 aa21.06■□□□□ 0.96
CBX4-201ENST00000269397 WFDC2Q14508 124 aa21.06■□□□□ 0.96
CBX4-201ENST00000269397 IGF1P05019 195 aa21.06■□□□□ 0.96
CBX4-201ENST00000269397 EBI3Q14213 229 aa21.06■□□□□ 0.96
CBX4-201ENST00000269397 C8orf86Q6ZUL3 223 aa21.06■□□□□ 0.96
CBX4-201ENST00000269397 SLC50A1Q9BRV3 221 aa21.06■□□□□ 0.96
CBX4-201ENST00000269397 IGLL5B9A064 214 aa21.05■□□□□ 0.96
CBX4-201ENST00000269397 FAM110DQ8TAY7 271 aaPredicted RBP21.05■□□□□ 0.96
CBX4-201ENST00000269397 A0A087WX48 190 aa21.05■□□□□ 0.96
CBX4-201ENST00000269397 PSMG4Q5JS54 123 aa21.05■□□□□ 0.96
CBX4-201ENST00000269397 AMTNQ6UX39 209 aa21.05■□□□□ 0.96
CBX4-201ENST00000269397 HIST1H4GQ99525 98 aa21.04■□□□□ 0.96
CBX4-201ENST00000269397 H3BMG7 143 aa21.04■□□□□ 0.96
CBX4-201ENST00000269397 CCL21O00585 134 aa21.04■□□□□ 0.96
CBX4-201ENST00000269397 TCF15Q12870 199 aa21.04■□□□□ 0.96
CBX4-201ENST00000269397 PRR9Q5T870 116 aa21.04■□□□□ 0.96
CBX4-201ENST00000269397 LCNL1Q6ZST4 164 aa21.03■□□□□ 0.96
CBX4-201ENST00000269397 ZNF479Q96JC4 524 aa21.03■□□□□ 0.96
CBX4-201ENST00000269397 E9PLD3 99 aa21.02■□□□□ 0.96
CBX4-201ENST00000269397 SRSF1Q07955 248 aaKnown RBP eCLIP21.02■□□□□ 0.96
CBX4-201ENST00000269397 C12orf74Q32Q52 190 aa21.02■□□□□ 0.96
CBX4-201ENST00000269397 MUC6Q6W4X9 2439 aa21.02■□□□□ 0.96
CBX4-201ENST00000269397 RAB9AP51151 201 aa21.01■□□□□ 0.95
CBX4-201ENST00000269397 GTSF1LQ9H1H1 148 aa21.01■□□□□ 0.95
CBX4-201ENST00000269397 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP21.01■□□□□ 0.95
CBX4-201ENST00000269397 DEFB1P60022 68 aa21.01■□□□□ 0.95
CBX4-201ENST00000269397 M0R381 172 aa21■□□□□ 0.95
CBX4-201ENST00000269397 MINOS1Q5TGZ0 78 aa21■□□□□ 0.95
CBX4-201ENST00000269397 FOXI2Q6ZQN5 318 aa21■□□□□ 0.95
CBX4-201ENST00000269397 SH2D6Q7Z4S9 175 aa21■□□□□ 0.95
CBX4-201ENST00000269397 MINOS1-NBL1R4GNA1 71 aa21■□□□□ 0.95
CBX4-201ENST00000269397 COL6A6A6NMZ7 2263 aa21■□□□□ 0.95
CBX4-201ENST00000269397 METTL26Q96S19 204 aa21■□□□□ 0.95
CBX4-201ENST00000269397 LINC00527Q9UJ94 153 aa20.99■□□□□ 0.95
CBX4-201ENST00000269397 OOSP1A8MZH6 123 aa20.99■□□□□ 0.95
CBX4-201ENST00000269397 C16orf92Q96LL3 132 aa20.98■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms