RNA–Protein interactions for RNA: ENST00000265641.9

CPT1A-201, Transcript of carnitine palmitoyltransferase 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPT1A, Length 5,232 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1A-201ENST00000265641 UFSP1Q6NVU6 142 aa8.52□□□□□ -1.05
CPT1A-201ENST00000265641 ZNF833PQ6ZTB9 187 aa8.52□□□□□ -1.05
CPT1A-201ENST00000265641 LINC00527Q9UJ94 153 aa8.52□□□□□ -1.05
CPT1A-201ENST00000265641 POLEQ07864 2286 aa8.51□□□□□ -1.05
CPT1A-201ENST00000265641 F6UB75 175 aa8.51□□□□□ -1.05
CPT1A-201ENST00000265641 C9orf106Q8NAJ2 232 aa8.51□□□□□ -1.05
CPT1A-201ENST00000265641 IGKV3D-20A0A0C4DH25 116 aa8.51□□□□□ -1.05
CPT1A-201ENST00000265641 IGHV1-18A0A0C4DH31 117 aa8.51□□□□□ -1.05
CPT1A-201ENST00000265641 B3GALT5-AS1P59052 145 aa8.51□□□□□ -1.05
CPT1A-201ENST00000265641 HERVK_113P63121 156 aa8.51□□□□□ -1.05
CPT1A-201ENST00000265641 IGHV1-3A0A0C4DH29 117 aa8.51□□□□□ -1.05
CPT1A-201ENST00000265641 IGKV3OR2-268A0A0C4DH90 116 aa8.51□□□□□ -1.05
CPT1A-201ENST00000265641 RPL36AP83881 106 aaKnown RBP8.51□□□□□ -1.05
CPT1A-201ENST00000265641 NDUFA11Q86Y39 141 aa8.51□□□□□ -1.05
CPT1A-201ENST00000265641 RPL36ALQ969Q0 106 aaKnown RBP8.51□□□□□ -1.05
CPT1A-201ENST00000265641 HELZP42694 1942 aaKnown RBP8.5□□□□□ -1.05
CPT1A-201ENST00000265641 CENPVL3A0A0U1RRI6 287 aa8.5□□□□□ -1.05
CPT1A-201ENST00000265641 PSMB8P28062 276 aa8.5□□□□□ -1.05
CPT1A-201ENST00000265641 FAM27E3Q08E93 113 aa8.5□□□□□ -1.05
CPT1A-201ENST00000265641 ATP5EP2Q5VTU8 51 aa8.5□□□□□ -1.05
CPT1A-201ENST00000265641 C20orf173Q96LM9 149 aa8.5□□□□□ -1.05
CPT1A-201ENST00000265641 TP53TG3Q9ULZ0 132 aa8.5□□□□□ -1.05
CPT1A-201ENST00000265641 EPOPA6NHQ4 379 aa8.5□□□□□ -1.05
CPT1A-201ENST00000265641 IGKV1-16P04430 117 aa8.5□□□□□ -1.05
CPT1A-201ENST00000265641 LINC00311Q8N616 119 aa8.5□□□□□ -1.05
CPT1A-201ENST00000265641 A4D1N5 150 aa8.5□□□□□ -1.05
CPT1A-201ENST00000265641 IGKV3-20P01619 116 aa8.5□□□□□ -1.05
CPT1A-201ENST00000265641 EFNA4P52798 201 aa8.5□□□□□ -1.05
CPT1A-201ENST00000265641 Q8N1Y9 231 aa8.5□□□□□ -1.05
CPT1A-201ENST00000265641 ORMDL1Q9P0S3 153 aa8.5□□□□□ -1.05
CPT1A-201ENST00000265641 IGKV1D-17A0A075B6S4 117 aa8.5□□□□□ -1.05
CPT1A-201ENST00000265641 SDHAF1A6NFY7 115 aa8.5□□□□□ -1.05
CPT1A-201ENST00000265641 IGHV1-8P0DP01 117 aa8.5□□□□□ -1.05
CPT1A-201ENST00000265641 PRB4P10163 310 aaPredicted RBP8.5□□□□□ -1.05
CPT1A-201ENST00000265641 ATP1A1-AS1Q5TC04 95 aa8.5□□□□□ -1.05
CPT1A-201ENST00000265641 LINC01587Q99440 93 aa8.5□□□□□ -1.05
CPT1A-201ENST00000265641 C11orf86A6NJI1 115 aa8.49□□□□□ -1.05
CPT1A-201ENST00000265641 P0DMU3 169 aa8.49□□□□□ -1.05
CPT1A-201ENST00000265641 FAM231AP0DMU4 169 aa8.49□□□□□ -1.05
CPT1A-201ENST00000265641 FAM231CP0DMU5 169 aa8.49□□□□□ -1.05
CPT1A-201ENST00000265641 CD59P13987 128 aa8.49□□□□□ -1.05
CPT1A-201ENST00000265641 PLXNA2O75051 1894 aa8.49□□□□□ -1.05
CPT1A-201ENST00000265641 A0A0U1RRA0 63 aa8.49□□□□□ -1.05
CPT1A-201ENST00000265641 MINOS1Q5TGZ0 78 aa8.49□□□□□ -1.05
CPT1A-201ENST00000265641 MRPL55Q7Z7F7 128 aaKnown RBP8.49□□□□□ -1.05
CPT1A-201ENST00000265641 MINOS1-NBL1R4GNA1 71 aa8.49□□□□□ -1.05
CPT1A-201ENST00000265641 IGHV1-46P01743 117 aa8.49□□□□□ -1.05
CPT1A-201ENST00000265641 DSCR8Q96T75 97 aa8.49□□□□□ -1.05
CPT1A-201ENST00000265641 COL4A6Q14031 1691 aa8.48□□□□□ -1.05
CPT1A-201ENST00000265641 FDCSPQ8NFU4 85 aa8.48□□□□□ -1.05
CPT1A-201ENST00000265641 GAFA1Q96PS6 74 aa8.48□□□□□ -1.05
CPT1A-201ENST00000265641 SMIM9A6NGZ8 99 aa8.48□□□□□ -1.05
CPT1A-201ENST00000265641 TCL1BO95988 128 aa8.48□□□□□ -1.05
CPT1A-201ENST00000265641 CREBBPQ92793 2442 aa8.48□□□□□ -1.05
CPT1A-201ENST00000265641 FAM236DA0A1B0GTK5 79 aa8.48□□□□□ -1.05
CPT1A-201ENST00000265641 JMJD7-PLA2G4BH0Y9G9 81 aa8.48□□□□□ -1.05
CPT1A-201ENST00000265641 FAM236CP0DP71 79 aa8.48□□□□□ -1.05
CPT1A-201ENST00000265641 TOMM6Q96B49 74 aa8.48□□□□□ -1.05
CPT1A-201ENST00000265641 CNOT1A5YKK6 2376 aaKnown RBP8.48□□□□□ -1.05
CPT1A-201ENST00000265641 C19orf71A6NCJ1 209 aa8.48□□□□□ -1.05
CPT1A-201ENST00000265641 FAM223BA6NKX1 122 aa8.48□□□□□ -1.05
CPT1A-201ENST00000265641 SRRM4A7MD48 611 aaKnown RBP8.48□□□□□ -1.05
CPT1A-201ENST00000265641 INS-IGF2F8WCM5 200 aa8.48□□□□□ -1.05
CPT1A-201ENST00000265641 C15orf65H3BRN8 121 aa8.48□□□□□ -1.05
CPT1A-201ENST00000265641 HAMPP81172 84 aa8.48□□□□□ -1.05
CPT1A-201ENST00000265641 FAM223AQ8IWN6 122 aa8.48□□□□□ -1.05
CPT1A-201ENST00000265641 ZNF625Q96I27 306 aaPredicted RBP8.48□□□□□ -1.05
CPT1A-201ENST00000265641 CACNA1HO95180 2353 aa8.48□□□□□ -1.05
CPT1A-201ENST00000265641 TMEM200BQ69YZ2 307 aa8.47□□□□□ -1.05
CPT1A-201ENST00000265641 CHCHD5Q9BSY4 110 aa8.47□□□□□ -1.05
CPT1A-201ENST00000265641 CRYGBP07316 175 aa8.47□□□□□ -1.05
CPT1A-201ENST00000265641 CXCL5P42830 114 aa8.47□□□□□ -1.05
CPT1A-201ENST00000265641 NDUFC2-KCTD14E9PQ53 114 aa8.47□□□□□ -1.05
CPT1A-201ENST00000265641 MUSTN1Q8IVN3 82 aa8.47□□□□□ -1.05
CPT1A-201ENST00000265641 C8orf31Q8N9H6 132 aa8.47□□□□□ -1.05
CPT1A-201ENST00000265641 PKDREJQ9NTG1 2253 aa8.47□□□□□ -1.05
CPT1A-201ENST00000265641 CACNA1GO43497 2377 aa8.47□□□□□ -1.05
CPT1A-201ENST00000265641 BRK1Q8WUW1 75 aa8.47□□□□□ -1.05
CPT1A-201ENST00000265641 TIMM17AQ99595 171 aa8.47□□□□□ -1.05
CPT1A-201ENST00000265641 DOCK10Q96BY6 2186 aa8.47□□□□□ -1.05
CPT1A-201ENST00000265641 CRYGCP07315 174 aa8.47□□□□□ -1.05
CPT1A-201ENST00000265641 F5H768 121 aa8.46□□□□□ -1.05
CPT1A-201ENST00000265641 SPTBN2O15020 2390 aa8.46□□□□□ -1.05
CPT1A-201ENST00000265641 BSPH1Q075Z2 132 aa8.46□□□□□ -1.05
CPT1A-201ENST00000265641 SPRR3Q9UBC9 169 aa8.46□□□□□ -1.05
CPT1A-201ENST00000265641 FAM240AA0A1B0GVK7 77 aa8.46□□□□□ -1.06
CPT1A-201ENST00000265641 PF4P02776 101 aa8.46□□□□□ -1.06
CPT1A-201ENST00000265641 GP9P14770 177 aa8.46□□□□□ -1.06
CPT1A-201ENST00000265641 CMC4P56277 68 aaPredicted RBP8.46□□□□□ -1.06
CPT1A-201ENST00000265641 DEFB123Q8N688 67 aa8.46□□□□□ -1.06
CPT1A-201ENST00000265641 PRSS22Q9GZN4 317 aa8.46□□□□□ -1.06
CPT1A-201ENST00000265641 ZNF407Q9C0G0 2248 aa8.46□□□□□ -1.06
CPT1A-201ENST00000265641 CFAP126Q5VTH2 177 aa8.46□□□□□ -1.06
CPT1A-201ENST00000265641 MBD6Q96DN6 1003 aa8.46□□□□□ -1.06
CPT1A-201ENST00000265641 DOPEY2Q9Y3R5 2298 aa8.46□□□□□ -1.06
CPT1A-201ENST00000265641 M0QXV9 152 aa8.46□□□□□ -1.06
CPT1A-201ENST00000265641 NDUFC1O43677 76 aa8.46□□□□□ -1.06
CPT1A-201ENST00000265641 C15orf32Q32M92 178 aa8.46□□□□□ -1.06
CPT1A-201ENST00000265641 C2orf91Q6ZV80 131 aa8.46□□□□□ -1.06
CPT1A-201ENST00000265641 SPAARA0A1B0GVQ0 90 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms