RNA–Protein interactions for RNA: ENST00000263388.6

NOTCH3-201, Transcript of notch 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH3, Length 8,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-201ENST00000263388 CEND1Q8N111 149 aa14.05□□□□□ -0.16
NOTCH3-201ENST00000263388 PKIGQ9Y2B9 76 aa14.05□□□□□ -0.16
NOTCH3-201ENST00000263388 BPESC1Q9GZL8 116 aa14.05□□□□□ -0.16
NOTCH3-201ENST00000263388 GAGE12HA6NDE8 117 aa14.05□□□□□ -0.16
NOTCH3-201ENST00000263388 K7EP13 123 aa14.05□□□□□ -0.16
NOTCH3-201ENST00000263388 K7EP34 96 aa14.04□□□□□ -0.16
NOTCH3-201ENST00000263388 POU2AF1Q16633 256 aa14.04□□□□□ -0.16
NOTCH3-201ENST00000263388 TSSC4Q9Y5U2 329 aaPredicted RBP14.04□□□□□ -0.16
NOTCH3-201ENST00000263388 SYNJ2BPP57105 145 aa14.04□□□□□ -0.16
NOTCH3-201ENST00000263388 EXPH5Q8NEV8 1989 aa14.04□□□□□ -0.16
NOTCH3-201ENST00000263388 RAI1Q7Z5J4 1906 aaPredicted RBP14.04□□□□□ -0.16
NOTCH3-201ENST00000263388 TMEM14CQ9P0S9 112 aa14.04□□□□□ -0.16
NOTCH3-201ENST00000263388 A0A1W2PPM0 123 aa14.04□□□□□ -0.16
NOTCH3-201ENST00000263388 COX8AP10176 69 aa14.04□□□□□ -0.16
NOTCH3-201ENST00000263388 RMI2Q96E14 147 aa14.04□□□□□ -0.16
NOTCH3-201ENST00000263388 SHISA9B4DS77 424 aa14.04□□□□□ -0.16
NOTCH3-201ENST00000263388 DEFB130BP0DP73 79 aa14.03□□□□□ -0.16
NOTCH3-201ENST00000263388 DEFB130AP0DP74 79 aa14.03□□□□□ -0.16
NOTCH3-201ENST00000263388 PRR31Q5SQ13 230 aa14.03□□□□□ -0.16
NOTCH3-201ENST00000263388 MORN5Q5VZ52 161 aa14.03□□□□□ -0.16
NOTCH3-201ENST00000263388 C2orf66Q6UXQ4 117 aa14.03□□□□□ -0.16
NOTCH3-201ENST00000263388 C8orf86Q6ZUL3 223 aa14.03□□□□□ -0.16
NOTCH3-201ENST00000263388 TRBV19A0A075B6N1 114 aa14.02□□□□□ -0.16
NOTCH3-201ENST00000263388 CDKN1BP46527 198 aa14.02□□□□□ -0.16
NOTCH3-201ENST00000263388 IGFL4Q6B9Z1 124 aa14.02□□□□□ -0.16
NOTCH3-201ENST00000263388 MRPL51Q4U2R6 128 aaKnown RBP14.02□□□□□ -0.16
NOTCH3-201ENST00000263388 MCRIP2Q9BUT9 160 aaKnown RBP14.02□□□□□ -0.16
NOTCH3-201ENST00000263388 SCRT2Q9NQ03 307 aa14.02□□□□□ -0.16
NOTCH3-201ENST00000263388 ZNF581Q9P0T4 197 aa14.02□□□□□ -0.16
NOTCH3-201ENST00000263388 FAM231DQ6ZW35 169 aa14.02□□□□□ -0.16
NOTCH3-201ENST00000263388 FAM110DQ8TAY7 271 aaPredicted RBP14.02□□□□□ -0.16
NOTCH3-201ENST00000263388 CYYR1Q96J86 154 aa14.02□□□□□ -0.16
NOTCH3-201ENST00000263388 E7EQL1 145 aa14.02□□□□□ -0.17
NOTCH3-201ENST00000263388 COL8A2P25067 703 aa14.02□□□□□ -0.17
NOTCH3-201ENST00000263388 OVOL3O00110 214 aa14.02□□□□□ -0.17
NOTCH3-201ENST00000263388 LGALS9BQ3B8N2 356 aa14.02□□□□□ -0.17
NOTCH3-201ENST00000263388 LGALS9CQ6DKI2 356 aa14.02□□□□□ -0.17
NOTCH3-201ENST00000263388 Q6ZS92 163 aa14.02□□□□□ -0.17
NOTCH3-201ENST00000263388 SPINK13Q1W4C9 94 aa14.01□□□□□ -0.17
NOTCH3-201ENST00000263388 C10orf91Q5T1B1 145 aa14.01□□□□□ -0.17
NOTCH3-201ENST00000263388 RNF144BQ7Z419 303 aa14.01□□□□□ -0.17
NOTCH3-201ENST00000263388 COL4A6Q14031 1691 aa14.01□□□□□ -0.17
NOTCH3-201ENST00000263388 CHKB-CPT1BH3BT56 60 aa14.01□□□□□ -0.17
NOTCH3-201ENST00000263388 NBL1P41271 181 aa14.01□□□□□ -0.17
NOTCH3-201ENST00000263388 F8VRH5 84 aa14.01□□□□□ -0.17
NOTCH3-201ENST00000263388 NDUFS6O75380 124 aaKnown RBP14.01□□□□□ -0.17
NOTCH3-201ENST00000263388 AZU1P20160 251 aa14.01□□□□□ -0.17
NOTCH3-201ENST00000263388 TMEM243Q9BU79 118 aa14.01□□□□□ -0.17
NOTCH3-201ENST00000263388 ATP6V0E1O15342 81 aa14.01□□□□□ -0.17
NOTCH3-201ENST00000263388 ACYP1P07311 99 aa14.01□□□□□ -0.17
NOTCH3-201ENST00000263388 Q8TCH9 128 aa14.01□□□□□ -0.17
NOTCH3-201ENST00000263388 TRAV12-1A0A0B4J245 112 aa14.01□□□□□ -0.17
NOTCH3-201ENST00000263388 K7EMI3 77 aa14.01□□□□□ -0.17
NOTCH3-201ENST00000263388 MSMBP08118 114 aa14.01□□□□□ -0.17
NOTCH3-201ENST00000263388 DEFB131AP59861 70 aa14.01□□□□□ -0.17
NOTCH3-201ENST00000263388 PTPRSQ13332 1948 aa14□□□□□ -0.17
NOTCH3-201ENST00000263388 TMEM213A2RRL7 107 aa14□□□□□ -0.17
NOTCH3-201ENST00000263388 DEFB121Q5J5C9 76 aa14□□□□□ -0.17
NOTCH3-201ENST00000263388 H3BQ85 93 aa14□□□□□ -0.17
NOTCH3-201ENST00000263388 CARD19Q96LW7 228 aa14□□□□□ -0.17
NOTCH3-201ENST00000263388 C1orf43Q9BWL3 253 aa14□□□□□ -0.17
NOTCH3-201ENST00000263388 C5orf47Q569G3 176 aa14□□□□□ -0.17
NOTCH3-201ENST00000263388 CACNA1AO00555 2505 aa14□□□□□ -0.17
NOTCH3-201ENST00000263388 APOC4P55056 127 aa14□□□□□ -0.17
NOTCH3-201ENST00000263388 V9GYV3 84 aa14□□□□□ -0.17
NOTCH3-201ENST00000263388 PAX9P55771 341 aa13.99□□□□□ -0.17
NOTCH3-201ENST00000263388 BVES-AS1Q5T3Y7 98 aa13.99□□□□□ -0.17
NOTCH3-201ENST00000263388 LINC01545Q5VT33 79 aa13.99□□□□□ -0.17
NOTCH3-201ENST00000263388 C5orf24Q7Z6I8 188 aa13.99□□□□□ -0.17
NOTCH3-201ENST00000263388 MST1LQ2TV78 715 aa13.99□□□□□ -0.17
NOTCH3-201ENST00000263388 MLANAQ16655 118 aa13.99□□□□□ -0.17
NOTCH3-201ENST00000263388 HLA-DRB4P13762 266 aa13.99□□□□□ -0.17
NOTCH3-201ENST00000263388 PFN2P35080 140 aa13.99□□□□□ -0.17
NOTCH3-201ENST00000263388 HLA-DRB4X5D2U9 266 aa13.99□□□□□ -0.17
NOTCH3-201ENST00000263388 GAGE7O76087 117 aa13.99□□□□□ -0.17
NOTCH3-201ENST00000263388 GAGE12FP0CL80 117 aa13.99□□□□□ -0.17
NOTCH3-201ENST00000263388 GAGE12GP0CL81 117 aa13.99□□□□□ -0.17
NOTCH3-201ENST00000263388 GAGE12IP0CL82 117 aa13.99□□□□□ -0.17
NOTCH3-201ENST00000263388 HERVK_113P63121 156 aa13.99□□□□□ -0.17
NOTCH3-201ENST00000263388 ABCA2Q9BZC7 2435 aa13.99□□□□□ -0.17
NOTCH3-201ENST00000263388 SDHAF1A6NFY7 115 aa13.99□□□□□ -0.17
NOTCH3-201ENST00000263388 LINC01619G3V211 115 aa13.99□□□□□ -0.17
NOTCH3-201ENST00000263388 DAD1P61803 113 aa13.99□□□□□ -0.17
NOTCH3-201ENST00000263388 TAL2Q16559 108 aa13.99□□□□□ -0.17
NOTCH3-201ENST00000263388 IGHG2P01859 326 aa13.99□□□□□ -0.17
NOTCH3-201ENST00000263388 CUL9Q8IWT3 2517 aa13.98□□□□□ -0.17
NOTCH3-201ENST00000263388 NDUFA4O00483 81 aa13.98□□□□□ -0.17
NOTCH3-201ENST00000263388 ZNF134P52741 427 aa13.98□□□□□ -0.17
NOTCH3-201ENST00000263388 IGKV1-6A0A0C4DH72 117 aa13.98□□□□□ -0.17
NOTCH3-201ENST00000263388 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.98□□□□□ -0.17
NOTCH3-201ENST00000263388 KLF5Q13887 457 aaPredicted RBP13.98□□□□□ -0.17
NOTCH3-201ENST00000263388 PRR25Q96S07 402 aa13.98□□□□□ -0.17
NOTCH3-201ENST00000263388 KLHDC3Q9BQ90 382 aa13.98□□□□□ -0.17
NOTCH3-201ENST00000263388 GNLYP22749 145 aa13.97□□□□□ -0.17
NOTCH3-201ENST00000263388 IGHV1OR15-1A0A075B7D0 117 aa13.97□□□□□ -0.17
NOTCH3-201ENST00000263388 F5H768 121 aa13.97□□□□□ -0.17
NOTCH3-201ENST00000263388 SIVA1O15304 175 aa13.97□□□□□ -0.17
NOTCH3-201ENST00000263388 IGHV2-70P01814 119 aa13.97□□□□□ -0.17
NOTCH3-201ENST00000263388 FUSP35637 526 aaKnown RBP eCLIP13.97□□□□□ -0.17
NOTCH3-201ENST00000263388 SIGLEC8Q9NYZ4 499 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms