RNA–Protein interactions for RNA: ENST00000263121.11

SMARCB1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,690 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-201ENST00000263121 EBLN2Q6P2I7 272 aa17.04■□□□□ 0.32
SMARCB1-201ENST00000263121 FABP5P3A8MUU1 101 aa17.04■□□□□ 0.32
SMARCB1-201ENST00000263121 CRISP2P16562 243 aa17.04■□□□□ 0.32
SMARCB1-201ENST00000263121 CD33P20138 364 aa17.04■□□□□ 0.32
SMARCB1-201ENST00000263121 DEFB131AP59861 70 aa17.04■□□□□ 0.32
SMARCB1-201ENST00000263121 RPL19P84098 196 aaKnown RBP17.04■□□□□ 0.32
SMARCB1-201ENST00000263121 PRR9Q5T870 116 aa17.04■□□□□ 0.32
SMARCB1-201ENST00000263121 APRG1Q8IVJ8 170 aa17.04■□□□□ 0.32
SMARCB1-201ENST00000263121 OR2K2Q8NGT1 345 aa17.04■□□□□ 0.32
SMARCB1-201ENST00000263121 NEU1Q99519 415 aa17.04■□□□□ 0.32
SMARCB1-201ENST00000263121 GFRA4Q9GZZ7 299 aa17.04■□□□□ 0.32
SMARCB1-201ENST00000263121 MAP6D1Q9H9H5 199 aa17.04■□□□□ 0.32
SMARCB1-201ENST00000263121 ODF3Q96PU9 254 aa17.03■□□□□ 0.32
SMARCB1-201ENST00000263121 FAM231BA6NCW3 169 aa17.02■□□□□ 0.32
SMARCB1-201ENST00000263121 RPS10P46783 165 aaKnown RBP17.02■□□□□ 0.32
SMARCB1-201ENST00000263121 GTSF1Q8WW33 167 aa17.02■□□□□ 0.32
SMARCB1-201ENST00000263121 NAT8BQ9UHF3 227 aa17.02■□□□□ 0.32
SMARCB1-201ENST00000263121 DUSP14O95147 198 aaKnown RBP17.01■□□□□ 0.31
SMARCB1-201ENST00000263121 NUP35Q8NFH5 326 aa17.01■□□□□ 0.31
SMARCB1-201ENST00000263121 SRD5A3Q9H8P0 318 aa17.01■□□□□ 0.31
SMARCB1-201ENST00000263121 TMEM189A5PLL7 270 aa17.01■□□□□ 0.31
SMARCB1-201ENST00000263121 HIGD1CA8MV81 97 aa17.01■□□□□ 0.31
SMARCB1-201ENST00000263121 GZMBP10144 247 aa17■□□□□ 0.31
SMARCB1-201ENST00000263121 A8MTW9 85 aa16.99■□□□□ 0.31
SMARCB1-201ENST00000263121 KLLNB2CW77 178 aa16.99■□□□□ 0.31
SMARCB1-201ENST00000263121 LINC01559Q495D7 138 aa16.99■□□□□ 0.31
SMARCB1-201ENST00000263121 TENM1Q9UKZ4 2725 aa16.99■□□□□ 0.31
SMARCB1-201ENST00000263121 KNCNA6PVL3 124 aa16.98■□□□□ 0.31
SMARCB1-201ENST00000263121 HLA-DRB4P13762 266 aa16.98■□□□□ 0.31
SMARCB1-201ENST00000263121 FOXA3P55318 350 aaPredicted RBP16.98■□□□□ 0.31
SMARCB1-201ENST00000263121 ODF3L2Q3SX64 289 aa16.98■□□□□ 0.31
SMARCB1-201ENST00000263121 ZNF747Q9BV97 191 aa16.98■□□□□ 0.31
SMARCB1-201ENST00000263121 C11orf21Q9P2W6 132 aa16.98■□□□□ 0.31
SMARCB1-201ENST00000263121 HLA-DRB4X5D2U9 266 aa16.98■□□□□ 0.31
SMARCB1-201ENST00000263121 GPX1P07203 203 aa16.97■□□□□ 0.31
SMARCB1-201ENST00000263121 RPS20P60866 119 aaKnown RBP16.97■□□□□ 0.31
SMARCB1-201ENST00000263121 ZNF575Q86XF7 245 aa16.97■□□□□ 0.31
SMARCB1-201ENST00000263121 MAST4O15021 2626 aa16.97■□□□□ 0.31
SMARCB1-201ENST00000263121 J3KRW8 73 aa16.97■□□□□ 0.31
SMARCB1-201ENST00000263121 LEPP41159 167 aa16.97■□□□□ 0.31
SMARCB1-201ENST00000263121 KIR3DS1Q14943 382 aa16.97■□□□□ 0.31
SMARCB1-201ENST00000263121 ZNF124Q15973 351 aa16.97■□□□□ 0.31
SMARCB1-201ENST00000263121 Q6AWC8 147 aa16.97■□□□□ 0.31
SMARCB1-201ENST00000263121 AMTNQ6UX39 209 aa16.97■□□□□ 0.31
SMARCB1-201ENST00000263121 Q6ZQT7 251 aa16.97■□□□□ 0.31
SMARCB1-201ENST00000263121 SPATA3Q8NHX4 192 aa16.97■□□□□ 0.31
SMARCB1-201ENST00000263121 TMSB15BA0A087X1C1 80 aa16.96■□□□□ 0.31
SMARCB1-201ENST00000263121 XKRY2A2RUG3 117 aa16.96■□□□□ 0.31
SMARCB1-201ENST00000263121 H3BMM0 161 aa16.96■□□□□ 0.31
SMARCB1-201ENST00000263121 SPINK4O60575 86 aa16.96■□□□□ 0.31
SMARCB1-201ENST00000263121 ORM1P02763 201 aa16.96■□□□□ 0.31
SMARCB1-201ENST00000263121 ACTL10Q5JWF8 245 aa16.96■□□□□ 0.31
SMARCB1-201ENST00000263121 TRAV21A0A0B4J279 112 aa16.95■□□□□ 0.3
SMARCB1-201ENST00000263121 IGKV3D-20A0A0C4DH25 116 aa16.95■□□□□ 0.3
SMARCB1-201ENST00000263121 C1orf196B1AJZ1 125 aa16.95■□□□□ 0.3
SMARCB1-201ENST00000263121 IGKV3-20P01619 116 aa16.95■□□□□ 0.3
SMARCB1-201ENST00000263121 FRMD6-AS1P0C7T7 363 aa16.95■□□□□ 0.3
SMARCB1-201ENST00000263121 BEAN1Q3B7T3 259 aa16.95■□□□□ 0.3
SMARCB1-201ENST00000263121 TRGC2P03986 189 aa16.94■□□□□ 0.3
SMARCB1-201ENST00000263121 RNASE4P34096 147 aaKnown RBP16.94■□□□□ 0.3
SMARCB1-201ENST00000263121 MRPL54Q6P161 138 aaKnown RBP16.94■□□□□ 0.3
SMARCB1-201ENST00000263121 PGLYRP4Q96LB8 373 aa16.94■□□□□ 0.3
SMARCB1-201ENST00000263121 PHOX2AO14813 284 aa16.94■□□□□ 0.3
SMARCB1-201ENST00000263121 INSL3P51460 131 aa16.94■□□□□ 0.3
SMARCB1-201ENST00000263121 ATRQ13535 2644 aa16.93■□□□□ 0.3
SMARCB1-201ENST00000263121 TSPOP30536 169 aa16.93■□□□□ 0.3
SMARCB1-201ENST00000263121 CMC4P56277 68 aaPredicted RBP16.93■□□□□ 0.3
SMARCB1-201ENST00000263121 ATP5L2Q7Z4Y8 100 aa16.93■□□□□ 0.3
SMARCB1-201ENST00000263121 FAM110AQ9BQ89 295 aa16.93■□□□□ 0.3
SMARCB1-201ENST00000263121 SORL1Q92673 2214 aa16.93■□□□□ 0.3
SMARCB1-201ENST00000263121 A0A1B0GXF2 115 aa16.92■□□□□ 0.3
SMARCB1-201ENST00000263121 OR11H12B2RN74 326 aa16.92■□□□□ 0.3
SMARCB1-201ENST00000263121 CDKN1BP46527 198 aa16.92■□□□□ 0.3
SMARCB1-201ENST00000263121 C9orf66Q5T8R8 295 aa16.92■□□□□ 0.3
SMARCB1-201ENST00000263121 RASL11AQ6T310 242 aa16.92■□□□□ 0.3
SMARCB1-201ENST00000263121 RBMY1BA6NDE4 496 aaKnown RBP16.91■□□□□ 0.3
SMARCB1-201ENST00000263121 RBMY1EA6NEQ0 496 aaKnown RBP16.91■□□□□ 0.3
SMARCB1-201ENST00000263121 RBMY1DP0C7P1 496 aaKnown RBP16.91■□□□□ 0.3
SMARCB1-201ENST00000263121 IGLC6P0CF74 106 aa16.91■□□□□ 0.3
SMARCB1-201ENST00000263121 RAB5BP61020 215 aa16.91■□□□□ 0.3
SMARCB1-201ENST00000263121 CLUHP3Q96NS8 147 aa16.91■□□□□ 0.3
SMARCB1-201ENST00000263121 AGRNO00468 2067 aa16.91■□□□□ 0.3
SMARCB1-201ENST00000263121 FBN1P35555 2871 aaKnown RBP16.91■□□□□ 0.3
SMARCB1-201ENST00000263121 C7orf71A4D174 169 aa16.91■□□□□ 0.3
SMARCB1-201ENST00000263121 M0R2Z0 102 aa16.91■□□□□ 0.3
SMARCB1-201ENST00000263121 SPINK13Q1W4C9 94 aa16.91■□□□□ 0.3
SMARCB1-201ENST00000263121 COX19Q49B96 90 aa16.91■□□□□ 0.3
SMARCB1-201ENST00000263121 GFI1BQ5VTD9 330 aa16.91■□□□□ 0.3
SMARCB1-201ENST00000263121 WFDC9Q8NEX5 89 aa16.91■□□□□ 0.3
SMARCB1-201ENST00000263121 GNB1LQ9BYB4 327 aa16.91■□□□□ 0.3
SMARCB1-201ENST00000263121 ZFP82Q8N141 532 aa16.9■□□□□ 0.3
SMARCB1-201ENST00000263121 GRIFINA4D1Z8 144 aa16.89■□□□□ 0.29
SMARCB1-201ENST00000263121 CTRLP40313 264 aa16.89■□□□□ 0.29
SMARCB1-201ENST00000263121 WDR73Q6P4I2 378 aa16.89■□□□□ 0.29
SMARCB1-201ENST00000263121 TMEM136Q6ZRR5 245 aa16.89■□□□□ 0.29
SMARCB1-201ENST00000263121 C3orf56Q8N813 242 aa16.89■□□□□ 0.29
SMARCB1-201ENST00000263121 C19orf73Q9NVV2 129 aa16.89■□□□□ 0.29
SMARCB1-201ENST00000263121 TRAPPC1Q9Y5R8 145 aa16.89■□□□□ 0.29
SMARCB1-201ENST00000263121 ZNF324O75467 553 aaPredicted RBP16.88■□□□□ 0.29
SMARCB1-201ENST00000263121 CD7P09564 240 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms