RNA–Protein interactions for RNA: ENST00000261897.5

PRPF40B-201, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,602 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-201ENST00000261897 LAGE3Q14657 143 aa12.49□□□□□ -0.41
PRPF40B-201ENST00000261897 TMEM78Q5T7P6 136 aa12.49□□□□□ -0.41
PRPF40B-201ENST00000261897 MFAP4P55083 255 aa12.49□□□□□ -0.41
PRPF40B-201ENST00000261897 ZFAND6Q6FIF0 208 aa12.49□□□□□ -0.41
PRPF40B-201ENST00000261897 C9JAW5 83 aa12.49□□□□□ -0.41
PRPF40B-201ENST00000261897 IGHV1-8P0DP01 117 aa12.49□□□□□ -0.41
PRPF40B-201ENST00000261897 C1orf210Q8IVY1 113 aa12.49□□□□□ -0.41
PRPF40B-201ENST00000261897 SMIM20Q8N5G0 67 aa12.49□□□□□ -0.41
PRPF40B-201ENST00000261897 SETD2Q9BYW2 2564 aaPredicted RBP12.48□□□□□ -0.41
PRPF40B-201ENST00000261897 C17orf100A8MU93 164 aa12.48□□□□□ -0.41
PRPF40B-201ENST00000261897 FOXI1Q12951 378 aa12.48□□□□□ -0.41
PRPF40B-201ENST00000261897 ZNF491Q8N8L2 437 aa12.48□□□□□ -0.41
PRPF40B-201ENST00000261897 PRSS33Q8NF86 280 aa12.48□□□□□ -0.41
PRPF40B-201ENST00000261897 IGHV1-3A0A0C4DH29 117 aa12.48□□□□□ -0.41
PRPF40B-201ENST00000261897 A8MWV9 139 aa12.48□□□□□ -0.41
PRPF40B-201ENST00000261897 NPC2P61916 151 aa12.48□□□□□ -0.41
PRPF40B-201ENST00000261897 BSPH1Q075Z2 132 aa12.48□□□□□ -0.41
PRPF40B-201ENST00000261897 PRADC1Q9BSG0 188 aa12.48□□□□□ -0.41
PRPF40B-201ENST00000261897 KLRD1Q13241 179 aa12.48□□□□□ -0.41
PRPF40B-201ENST00000261897 FAM74A4Q5TZK3 123 aa12.48□□□□□ -0.41
PRPF40B-201ENST00000261897 IGLV2-23P01705 113 aa12.47□□□□□ -0.41
PRPF40B-201ENST00000261897 C14orf178Q8N769 122 aaPredicted RBP12.47□□□□□ -0.41
PRPF40B-201ENST00000261897 C21orf62Q9NYP8 219 aa12.47□□□□□ -0.41
PRPF40B-201ENST00000261897 ANKRD11Q6UB99 2663 aaPredicted RBP12.47□□□□□ -0.41
PRPF40B-201ENST00000261897 E9PLD3 99 aa12.47□□□□□ -0.41
PRPF40B-201ENST00000261897 NDPQ00604 133 aa12.47□□□□□ -0.41
PRPF40B-201ENST00000261897 LHBP01229 141 aa12.47□□□□□ -0.41
PRPF40B-201ENST00000261897 TMEM155Q4W5P6 130 aa12.47□□□□□ -0.41
PRPF40B-201ENST00000261897 C1orf162Q8NEQ5 155 aaPredicted RBP12.47□□□□□ -0.41
PRPF40B-201ENST00000261897 PRAC2D3DTV9 90 aa12.46□□□□□ -0.41
PRPF40B-201ENST00000261897 XGP55808 180 aa12.46□□□□□ -0.41
PRPF40B-201ENST00000261897 GFRALQ6UXV0 394 aa12.46□□□□□ -0.41
PRPF40B-201ENST00000261897 PLSCR4Q9NRQ2 329 aa12.46□□□□□ -0.41
PRPF40B-201ENST00000261897 C16orf97H3BN30 126 aa12.46□□□□□ -0.42
PRPF40B-201ENST00000261897 HTN1P15515 57 aa12.46□□□□□ -0.42
PRPF40B-201ENST00000261897 TRAV2A0A0B4J234 112 aa12.45□□□□□ -0.42
PRPF40B-201ENST00000261897 FSTL3O95633 263 aa12.45□□□□□ -0.42
PRPF40B-201ENST00000261897 IGLV1-44P01699 117 aa12.45□□□□□ -0.42
PRPF40B-201ENST00000261897 GAGE2BQ13066 116 aa12.45□□□□□ -0.42
PRPF40B-201ENST00000261897 GAGE2EQ4V326 116 aa12.45□□□□□ -0.42
PRPF40B-201ENST00000261897 GAGE2DQ9UEU5 116 aa12.45□□□□□ -0.42
PRPF40B-201ENST00000261897 LINC00527Q9UJ94 153 aa12.45□□□□□ -0.42
PRPF40B-201ENST00000261897 SONP18583 2426 aaKnown RBP12.45□□□□□ -0.42
PRPF40B-201ENST00000261897 WI2-2373I1.2A0A1W2PRP0 233 aa12.45□□□□□ -0.42
PRPF40B-201ENST00000261897 CTSZQ9UBR2 303 aa12.45□□□□□ -0.42
PRPF40B-201ENST00000261897 PHLDA3Q9Y5J5 127 aa12.45□□□□□ -0.42
PRPF40B-201ENST00000261897 LINC01548A6NM66 108 aa12.45□□□□□ -0.42
PRPF40B-201ENST00000261897 DYNAPQ8N1N2 210 aa12.45□□□□□ -0.42
PRPF40B-201ENST00000261897 DEFB1P60022 68 aa12.44□□□□□ -0.42
PRPF40B-201ENST00000261897 Q6ZQT7 251 aa12.44□□□□□ -0.42
PRPF40B-201ENST00000261897 MYMXA0A1B0GTQ4 84 aa12.44□□□□□ -0.42
PRPF40B-201ENST00000261897 SRSF1Q07955 248 aaKnown RBP eCLIP12.44□□□□□ -0.42
PRPF40B-201ENST00000261897 CFHR4Q92496 578 aa12.44□□□□□ -0.42
PRPF40B-201ENST00000261897 HHLA3Q9XRX5 114 aa12.44□□□□□ -0.42
PRPF40B-201ENST00000261897 SMG1Q96Q15 3661 aaKnown RBP12.44□□□□□ -0.42
PRPF40B-201ENST00000261897 PTPN13Q12923 2485 aa12.44□□□□□ -0.42
PRPF40B-201ENST00000261897 C1QTNF4Q9BXJ3 329 aa12.43□□□□□ -0.42
PRPF40B-201ENST00000261897 CR1LQ2VPA4 569 aa12.43□□□□□ -0.42
PRPF40B-201ENST00000261897 LYRM7Q5U5X0 104 aa12.43□□□□□ -0.42
PRPF40B-201ENST00000261897 Q6ZUT4 128 aa12.43□□□□□ -0.42
PRPF40B-201ENST00000261897 H3BRN7 92 aa12.43□□□□□ -0.42
PRPF40B-201ENST00000261897 SCGB1A1P11684 91 aa12.43□□□□□ -0.42
PRPF40B-201ENST00000261897 DPF1Q92782 380 aa12.43□□□□□ -0.42
PRPF40B-201ENST00000261897 ZNF256Q9Y2P7 627 aaPredicted RBP12.43□□□□□ -0.42
PRPF40B-201ENST00000261897 H7C1H1 209 aa12.42□□□□□ -0.42
PRPF40B-201ENST00000261897 IGKV3-20P01619 116 aa12.42□□□□□ -0.42
PRPF40B-201ENST00000261897 LOXP28300 417 aaPredicted RBP12.42□□□□□ -0.42
PRPF40B-201ENST00000261897 C16orf92Q96LL3 132 aa12.42□□□□□ -0.42
PRPF40B-201ENST00000261897 CSMD1Q96PZ7 3565 aa12.42□□□□□ -0.42
PRPF40B-201ENST00000261897 CLEC19AQ6UXS0 136 aa12.42□□□□□ -0.42
PRPF40B-201ENST00000261897 TMEM178BH3BS89 294 aa12.41□□□□□ -0.42
PRPF40B-201ENST00000261897 K7EIM0 57 aa12.41□□□□□ -0.42
PRPF40B-201ENST00000261897 PVRIGQ6DKI7 326 aa12.41□□□□□ -0.42
PRPF40B-201ENST00000261897 RPL39LQ96EH5 51 aaKnown RBP12.41□□□□□ -0.42
PRPF40B-201ENST00000261897 MYO9AB2RTY4 2548 aa12.41□□□□□ -0.42
PRPF40B-201ENST00000261897 IGLV3-9A0A075B6K5 115 aa12.41□□□□□ -0.42
PRPF40B-201ENST00000261897 HERVK_113P61574 105 aa12.41□□□□□ -0.42
PRPF40B-201ENST00000261897 ADIPOQQ15848 244 aa12.41□□□□□ -0.42
PRPF40B-201ENST00000261897 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.41□□□□□ -0.42
PRPF40B-201ENST00000261897 PLEKHB2Q96CS7 222 aa12.41□□□□□ -0.42
PRPF40B-201ENST00000261897 DMXL1Q9Y485 3027 aa12.41□□□□□ -0.42
PRPF40B-201ENST00000261897 DEFB124Q8NES8 71 aa12.41□□□□□ -0.42
PRPF40B-201ENST00000261897 PLNP26678 52 aa12.4□□□□□ -0.42
PRPF40B-201ENST00000261897 SMPXQ9UHP9 88 aa12.4□□□□□ -0.42
PRPF40B-201ENST00000261897 ADARB2-AS1A8MUL3 147 aa12.4□□□□□ -0.42
PRPF40B-201ENST00000261897 I3L2K1 104 aa12.4□□□□□ -0.42
PRPF40B-201ENST00000261897 SRD5A1P18405 259 aa12.4□□□□□ -0.42
PRPF40B-201ENST00000261897 TEX36Q5VZQ5 186 aa12.4□□□□□ -0.42
PRPF40B-201ENST00000261897 Q8N8P6 123 aa12.4□□□□□ -0.42
PRPF40B-201ENST00000261897 PPDPFLQ8WWR9 84 aa12.4□□□□□ -0.42
PRPF40B-201ENST00000261897 TMEM14CQ9P0S9 112 aa12.39□□□□□ -0.43
PRPF40B-201ENST00000261897 F8VRH5 84 aa12.39□□□□□ -0.43
PRPF40B-201ENST00000261897 LGALS3P17931 250 aaKnown RBP12.39□□□□□ -0.43
PRPF40B-201ENST00000261897 C2orf66Q6UXQ4 117 aa12.39□□□□□ -0.43
PRPF40B-201ENST00000261897 NFE4Q86UQ8 179 aa12.39□□□□□ -0.43
PRPF40B-201ENST00000261897 DKK4Q9UBT3 224 aa12.39□□□□□ -0.43
PRPF40B-201ENST00000261897 A0A087WX48 190 aa12.39□□□□□ -0.43
PRPF40B-201ENST00000261897 A0A0U1RRA0 63 aa12.39□□□□□ -0.43
PRPF40B-201ENST00000261897 CRYGCP07315 174 aa12.39□□□□□ -0.43
PRPF40B-201ENST00000261897 TRPT1Q86TN4 253 aaKnown RBP12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms