RNA–Protein interactions for RNA: ENST00000256474.2

VHL-201, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VHL, Length 3,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-201ENST00000256474 SMIM15Q7Z3B0 74 aa10.47□□□□□ -0.73
VHL-201ENST00000256474 MS4A6AQ9H2W1 248 aa10.47□□□□□ -0.73
VHL-201ENST00000256474 K7ERJ3 54 aa10.47□□□□□ -0.73
VHL-201ENST00000256474 SAP30O75446 220 aa10.47□□□□□ -0.73
VHL-201ENST00000256474 NDUFA3O95167 84 aa10.47□□□□□ -0.73
VHL-201ENST00000256474 TNFRSF6BO95407 300 aa10.47□□□□□ -0.73
VHL-201ENST00000256474 MGPP08493 103 aa10.47□□□□□ -0.73
VHL-201ENST00000256474 C2orf91Q6ZV80 131 aa10.47□□□□□ -0.73
VHL-201ENST00000256474 A0A1W2PPR1 153 aa10.46□□□□□ -0.73
VHL-201ENST00000256474 HOXB4P17483 251 aaPredicted RBP10.46□□□□□ -0.73
VHL-201ENST00000256474 KIR3DS1Q14943 382 aa10.46□□□□□ -0.73
VHL-201ENST00000256474 PEF1Q9UBV8 284 aaKnown RBP10.46□□□□□ -0.73
VHL-201ENST00000256474 IGF1P05019 195 aa10.46□□□□□ -0.73
VHL-201ENST00000256474 EFNA4P52798 201 aa10.46□□□□□ -0.73
VHL-201ENST00000256474 CCDC168Q8NDH2 2452 aa10.46□□□□□ -0.74
VHL-201ENST00000256474 SFTA2Q6UW10 78 aa10.46□□□□□ -0.74
VHL-201ENST00000256474 AGPAT4-IT1Q9H0P7 198 aa10.46□□□□□ -0.74
VHL-201ENST00000256474 MTURNQ8N3F0 131 aa10.45□□□□□ -0.74
VHL-201ENST00000256474 Q8N9W7 124 aa10.45□□□□□ -0.74
VHL-201ENST00000256474 RBX1P62877 108 aa10.45□□□□□ -0.74
VHL-201ENST00000256474 PDE6HQ13956 83 aa10.45□□□□□ -0.74
VHL-201ENST00000256474 DTX2Q86UW9 622 aa10.45□□□□□ -0.74
VHL-201ENST00000256474 ARL6IP6Q8N6S5 226 aa10.45□□□□□ -0.74
VHL-201ENST00000256474 ZFYVE26Q68DK2 2539 aa10.45□□□□□ -0.74
VHL-201ENST00000256474 CD5LO43866 347 aa10.45□□□□□ -0.74
VHL-201ENST00000256474 IGKV3-20P01619 116 aa10.45□□□□□ -0.74
VHL-201ENST00000256474 ZC2HC1BQ5TFG8 222 aa10.45□□□□□ -0.74
VHL-201ENST00000256474 LY6G5BQ8NDX9 201 aa10.45□□□□□ -0.74
VHL-201ENST00000256474 NPBQ8NG41 125 aa10.45□□□□□ -0.74
VHL-201ENST00000256474 METTL26Q96S19 204 aa10.45□□□□□ -0.74
VHL-201ENST00000256474 MSRB2Q9Y3D2 182 aa10.45□□□□□ -0.74
VHL-201ENST00000256474 MYO18BQ8IUG5 2567 aa10.44□□□□□ -0.74
VHL-201ENST00000256474 F6UB75 175 aa10.44□□□□□ -0.74
VHL-201ENST00000256474 IGKV2D-26A0A0A0MRZ7 120 aa10.44□□□□□ -0.74
VHL-201ENST00000256474 TRAV40A0A0B4J280 105 aa10.44□□□□□ -0.74
VHL-201ENST00000256474 A0A1B0GW15 77 aa10.44□□□□□ -0.74
VHL-201ENST00000256474 SMAD7O15105 426 aaKnown RBP10.44□□□□□ -0.74
VHL-201ENST00000256474 PIP4P2Q8N4L2 257 aa10.44□□□□□ -0.74
VHL-201ENST00000256474 TTC9CQ8N5M4 171 aa10.44□□□□□ -0.74
VHL-201ENST00000256474 A6NDN8 102 aa10.44□□□□□ -0.74
VHL-201ENST00000256474 NHP2Q9NX24 153 aaKnown RBP10.43□□□□□ -0.74
VHL-201ENST00000256474 C11orf21Q9P2W6 132 aa10.43□□□□□ -0.74
VHL-201ENST00000256474 USP9XQ93008 2570 aaPredicted RBP10.43□□□□□ -0.74
VHL-201ENST00000256474 M0R1W7 72 aa10.43□□□□□ -0.74
VHL-201ENST00000256474 OVOL3O00110 214 aa10.43□□□□□ -0.74
VHL-201ENST00000256474 OCIAD2Q56VL3 154 aa10.43□□□□□ -0.74
VHL-201ENST00000256474 NEGR1Q7Z3B1 354 aa10.43□□□□□ -0.74
VHL-201ENST00000256474 PIEZO1Q92508 2521 aa10.43□□□□□ -0.74
VHL-201ENST00000256474 A0A0G2JLM5 398 aa10.43□□□□□ -0.74
VHL-201ENST00000256474 IGHG4P01861 327 aa10.43□□□□□ -0.74
VHL-201ENST00000256474 MEGF9Q9H1U4 602 aa10.43□□□□□ -0.74
VHL-201ENST00000256474 EMP1P54849 157 aa10.42□□□□□ -0.74
VHL-201ENST00000256474 SCGB2A2Q13296 93 aa10.42□□□□□ -0.74
VHL-201ENST00000256474 BUB3O43684 328 aa10.42□□□□□ -0.74
VHL-201ENST00000256474 TRBV12-3P01733 135 aa10.42□□□□□ -0.74
VHL-201ENST00000256474 PF4V1P10720 104 aa10.42□□□□□ -0.74
VHL-201ENST00000256474 TMEM8BA6NDV4 472 aa10.42□□□□□ -0.74
VHL-201ENST00000256474 RPS20P60866 119 aaKnown RBP10.42□□□□□ -0.74
VHL-201ENST00000256474 C8orf86Q6ZUL3 223 aa10.42□□□□□ -0.74
VHL-201ENST00000256474 JMJD8Q96S16 334 aa10.42□□□□□ -0.74
VHL-201ENST00000256474 SRSF8Q9BRL6 282 aaKnown RBP10.42□□□□□ -0.74
VHL-201ENST00000256474 SPCS1Q9Y6A9 102 aa10.42□□□□□ -0.74
VHL-201ENST00000256474 IGKV3D-20A0A0C4DH25 116 aa10.41□□□□□ -0.74
VHL-201ENST00000256474 ODF3BA8MYP8 253 aa10.41□□□□□ -0.74
VHL-201ENST00000256474 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.41□□□□□ -0.74
VHL-201ENST00000256474 MYOZ3Q8TDC0 251 aa10.41□□□□□ -0.74
VHL-201ENST00000256474 SMIM17P0DL12 118 aa10.41□□□□□ -0.74
VHL-201ENST00000256474 C16orf54Q6UWD8 224 aa10.41□□□□□ -0.74
VHL-201ENST00000256474 C14orf178Q8N769 122 aaPredicted RBP10.41□□□□□ -0.74
VHL-201ENST00000256474 ATP5G2Q06055 141 aa10.41□□□□□ -0.74
VHL-201ENST00000256474 KLRB1Q12918 225 aa10.41□□□□□ -0.74
VHL-201ENST00000256474 LGALS9BQ3B8N2 356 aa10.41□□□□□ -0.74
VHL-201ENST00000256474 LGALS9CQ6DKI2 356 aa10.41□□□□□ -0.74
VHL-201ENST00000256474 OR2K2Q8NGT1 345 aa10.41□□□□□ -0.74
VHL-201ENST00000256474 EEF1AKMT3Q96AZ1 226 aa10.41□□□□□ -0.74
VHL-201ENST00000256474 MRPL35Q9NZE8 188 aaKnown RBP10.41□□□□□ -0.74
VHL-201ENST00000256474 CLEC2AQ6UVW9 174 aa10.4□□□□□ -0.74
VHL-201ENST00000256474 ZNF493Q6ZR52 646 aa10.4□□□□□ -0.74
VHL-201ENST00000256474 CCDC140Q96MF4 163 aa10.4□□□□□ -0.74
VHL-201ENST00000256474 RNASE4P34096 147 aaKnown RBP10.4□□□□□ -0.74
VHL-201ENST00000256474 RNF185Q96GF1 192 aa10.4□□□□□ -0.74
VHL-201ENST00000256474 COL25A1Q9BXS0 654 aaPredicted RBP10.4□□□□□ -0.74
VHL-201ENST00000256474 FXYD2P54710 66 aa10.4□□□□□ -0.75
VHL-201ENST00000256474 GTF2H5Q6ZYL4 71 aa10.4□□□□□ -0.75
VHL-201ENST00000256474 ZNF502Q8TBZ5 544 aa10.4□□□□□ -0.75
VHL-201ENST00000256474 IGKCP01834 107 aa10.39□□□□□ -0.75
VHL-201ENST00000256474 HTN1P15515 57 aa10.39□□□□□ -0.75
VHL-201ENST00000256474 ARL3P36405 182 aa10.39□□□□□ -0.75
VHL-201ENST00000256474 PPP1R14DQ9NXH3 145 aa10.39□□□□□ -0.75
VHL-201ENST00000256474 F5H697 171 aa10.39□□□□□ -0.75
VHL-201ENST00000256474 UNQ9165/PRO28630Q6UXU0 137 aa10.38□□□□□ -0.75
VHL-201ENST00000256474 IGLC6P0CF74 106 aa10.38□□□□□ -0.75
VHL-201ENST00000256474 HSD52Q0P140 79 aa10.38□□□□□ -0.75
VHL-201ENST00000256474 PHLDA3Q9Y5J5 127 aa10.38□□□□□ -0.75
VHL-201ENST00000256474 ABCA2Q9BZC7 2435 aa10.38□□□□□ -0.75
VHL-201ENST00000256474 ZANQ9Y493 2812 aa10.38□□□□□ -0.75
VHL-201ENST00000256474 FGF6P10767 208 aa10.38□□□□□ -0.75
VHL-201ENST00000256474 SEC11AP67812 179 aa10.38□□□□□ -0.75
VHL-201ENST00000256474 K7ERU9 68 aa10.37□□□□□ -0.75
VHL-201ENST00000256474 NPFFO15130 113 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms