RNA–Protein interactions for RNA: ENST00000254193.10

SNRPA1-201, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPA1, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-201ENST00000254193 FHITP49789 147 aa12.69□□□□□ -0.38
SNRPA1-201ENST00000254193 TMUB2Q71RG4 321 aa12.69□□□□□ -0.38
SNRPA1-201ENST00000254193 SGK494Q96LW2 274 aa12.69□□□□□ -0.38
SNRPA1-201ENST00000254193 LENEPQ9Y5L5 61 aa12.69□□□□□ -0.38
SNRPA1-201ENST00000254193 IGHV1OR15-1A0A075B7D0 117 aa12.68□□□□□ -0.38
SNRPA1-201ENST00000254193 TCRAP04437 139 aa12.68□□□□□ -0.38
SNRPA1-201ENST00000254193 ANXA2RQ3ZCQ2 193 aa12.68□□□□□ -0.38
SNRPA1-201ENST00000254193 TMEM88Q6PEY1 159 aa12.68□□□□□ -0.38
SNRPA1-201ENST00000254193 C11orf72Q8NBR9 251 aa12.68□□□□□ -0.38
SNRPA1-201ENST00000254193 TVP23CQ96ET8 276 aa12.68□□□□□ -0.38
SNRPA1-201ENST00000254193 FAM210BQ96KR6 192 aa12.68□□□□□ -0.38
SNRPA1-201ENST00000254193 TP53TG3Q9ULZ0 132 aa12.68□□□□□ -0.38
SNRPA1-201ENST00000254193 EPDR1Q9UM22 224 aa12.68□□□□□ -0.38
SNRPA1-201ENST00000254193 ALMS1Q8TCU4 4167 aa12.68□□□□□ -0.38
SNRPA1-201ENST00000254193 LYSTQ99698 3801 aa12.67□□□□□ -0.38
SNRPA1-201ENST00000254193 hCG_2014768A0A024R1R8 64 aa12.67□□□□□ -0.38
SNRPA1-201ENST00000254193 GAGE12BA1L429 117 aa12.67□□□□□ -0.38
SNRPA1-201ENST00000254193 MAP1LC3B2A6NCE7 125 aa12.67□□□□□ -0.38
SNRPA1-201ENST00000254193 F5H768 121 aa12.67□□□□□ -0.38
SNRPA1-201ENST00000254193 PFDN1O60925 122 aa12.67□□□□□ -0.38
SNRPA1-201ENST00000254193 GAGE7O76087 117 aa12.67□□□□□ -0.38
SNRPA1-201ENST00000254193 GAGE12FP0CL80 117 aa12.67□□□□□ -0.38
SNRPA1-201ENST00000254193 GAGE12GP0CL81 117 aa12.67□□□□□ -0.38
SNRPA1-201ENST00000254193 GAGE12IP0CL82 117 aa12.67□□□□□ -0.38
SNRPA1-201ENST00000254193 UBE2G2P60604 165 aa12.67□□□□□ -0.38
SNRPA1-201ENST00000254193 MUC21Q5SSG8 566 aa12.67□□□□□ -0.38
SNRPA1-201ENST00000254193 TCTE3Q8IZS6 198 aa12.67□□□□□ -0.38
SNRPA1-201ENST00000254193 LINC00612Q8N6U2 182 aa12.67□□□□□ -0.38
SNRPA1-201ENST00000254193 ZNF680Q8NEM1 530 aa12.67□□□□□ -0.38
SNRPA1-201ENST00000254193 MAP1LC3BQ9GZQ8 125 aa12.67□□□□□ -0.38
SNRPA1-201ENST00000254193 A0A1W2PRE2 83 aa12.66□□□□□ -0.38
SNRPA1-201ENST00000254193 F6UZH7 168 aa12.66□□□□□ -0.38
SNRPA1-201ENST00000254193 ATP5G1P05496 136 aa12.66□□□□□ -0.38
SNRPA1-201ENST00000254193 SEC11BP0C7V7 166 aa12.66□□□□□ -0.38
SNRPA1-201ENST00000254193 ATP5G3P48201 142 aa12.66□□□□□ -0.38
SNRPA1-201ENST00000254193 DAZ2Q13117 558 aaKnown RBP12.66□□□□□ -0.38
SNRPA1-201ENST00000254193 Q6ZTI0 123 aa12.66□□□□□ -0.38
SNRPA1-201ENST00000254193 TREM1Q9NP99 234 aa12.66□□□□□ -0.38
SNRPA1-201ENST00000254193 KLF12Q9Y4X4 402 aa12.66□□□□□ -0.38
SNRPA1-201ENST00000254193 DNAH1Q9P2D7 4330 aa12.65□□□□□ -0.38
SNRPA1-201ENST00000254193 SERTM2A0A1B0GWG4 89 aa12.65□□□□□ -0.38
SNRPA1-201ENST00000254193 Q6AWC8 147 aa12.65□□□□□ -0.38
SNRPA1-201ENST00000254193 IFNA7P01567 189 aa12.64□□□□□ -0.39
SNRPA1-201ENST00000254193 IGLV2-11P01706 119 aa12.64□□□□□ -0.39
SNRPA1-201ENST00000254193 TCL1AP56279 114 aa12.64□□□□□ -0.39
SNRPA1-201ENST00000254193 EIF5AP63241 154 aaKnown RBP12.64□□□□□ -0.39
SNRPA1-201ENST00000254193 CYB561D1Q8N8Q1 229 aa12.64□□□□□ -0.39
SNRPA1-201ENST00000254193 FAM213BQ8TBF2 198 aa12.64□□□□□ -0.39
SNRPA1-201ENST00000254193 PSG8Q9UQ74 426 aa12.64□□□□□ -0.39
SNRPA1-201ENST00000254193 TRGV1A0A0A0MS02 117 aa12.63□□□□□ -0.39
SNRPA1-201ENST00000254193 FAM74A7A6NL05 159 aa12.63□□□□□ -0.39
SNRPA1-201ENST00000254193 UMAD1C9J7I0 102 aa12.63□□□□□ -0.39
SNRPA1-201ENST00000254193 K7EQM0 130 aa12.63□□□□□ -0.39
SNRPA1-201ENST00000254193 LGALSLQ3ZCW2 172 aaPredicted RBP12.63□□□□□ -0.39
SNRPA1-201ENST00000254193 IBA57Q5T440 356 aaKnown RBP12.63□□□□□ -0.39
SNRPA1-201ENST00000254193 STOML3Q8TAV4 291 aa12.63□□□□□ -0.39
SNRPA1-201ENST00000254193 LINC00479Q96M42 142 aa12.63□□□□□ -0.39
SNRPA1-201ENST00000254193 ATG101Q9BSB4 218 aa12.63□□□□□ -0.39
SNRPA1-201ENST00000254193 NAGKQ9UJ70 344 aa12.63□□□□□ -0.39
SNRPA1-201ENST00000254193 TRAV34A0A0B4J273 112 aa12.62□□□□□ -0.39
SNRPA1-201ENST00000254193 TPT1P13693 172 aaKnown RBP12.62□□□□□ -0.39
SNRPA1-201ENST00000254193 FLI1Q01543 452 aaPredicted RBP12.62□□□□□ -0.39
SNRPA1-201ENST00000254193 FAM159AQ6UWV7 190 aa12.62□□□□□ -0.39
SNRPA1-201ENST00000254193 PRNTQ86SH4 94 aa12.62□□□□□ -0.39
SNRPA1-201ENST00000254193 SFT2D1Q8WV19 159 aa12.62□□□□□ -0.39
SNRPA1-201ENST00000254193 C8orf49Q96NF6 230 aa12.62□□□□□ -0.39
SNRPA1-201ENST00000254193 NDFIP1Q9BT67 221 aa12.62□□□□□ -0.39
SNRPA1-201ENST00000254193 MDFICQ9P1T7 246 aa12.62□□□□□ -0.39
SNRPA1-201ENST00000254193 HYDINQ4G0P3 5121 aa12.61□□□□□ -0.39
SNRPA1-201ENST00000254193 A0A1B0GV50 99 aa12.61□□□□□ -0.39
SNRPA1-201ENST00000254193 SPINK4O60575 86 aa12.61□□□□□ -0.39
SNRPA1-201ENST00000254193 C1QBP02746 253 aa12.61□□□□□ -0.39
SNRPA1-201ENST00000254193 P0DMU3 169 aa12.61□□□□□ -0.39
SNRPA1-201ENST00000254193 FAM231AP0DMU4 169 aa12.61□□□□□ -0.39
SNRPA1-201ENST00000254193 FAM231CP0DMU5 169 aa12.61□□□□□ -0.39
SNRPA1-201ENST00000254193 OR5I1Q13606 314 aa12.61□□□□□ -0.39
SNRPA1-201ENST00000254193 TMEM183BQ1AE95 376 aa12.61□□□□□ -0.39
SNRPA1-201ENST00000254193 AKAP14Q86UN6 197 aa12.61□□□□□ -0.39
SNRPA1-201ENST00000254193 TMEM183AQ8IXX5 376 aa12.61□□□□□ -0.39
SNRPA1-201ENST00000254193 MBD3L1Q8WWY6 194 aa12.61□□□□□ -0.39
SNRPA1-201ENST00000254193 TRGV2A0A075B6R0 118 aa12.6□□□□□ -0.39
SNRPA1-201ENST00000254193 TRAV21A0A0B4J279 112 aa12.6□□□□□ -0.39
SNRPA1-201ENST00000254193 HOXA5P20719 270 aa12.6□□□□□ -0.39
SNRPA1-201ENST00000254193 ZNF415Q09FC8 603 aa12.6□□□□□ -0.39
SNRPA1-201ENST00000254193 TMEM75Q8N9X5 138 aa12.6□□□□□ -0.39
SNRPA1-201ENST00000254193 NKX6-2Q9C056 277 aaPredicted RBP12.6□□□□□ -0.39
SNRPA1-201ENST00000254193 MRPL16Q9NX20 251 aaKnown RBP12.6□□□□□ -0.39
SNRPA1-201ENST00000254193 PEX7O00628 323 aa12.59□□□□□ -0.39
SNRPA1-201ENST00000254193 GNRH2O43555 120 aa12.59□□□□□ -0.39
SNRPA1-201ENST00000254193 ZNF80P51504 273 aaPredicted RBP12.59□□□□□ -0.39
SNRPA1-201ENST00000254193 TDRG1Q3Y452 100 aa12.59□□□□□ -0.39
SNRPA1-201ENST00000254193 CST9LP1Q5W188 147 aa12.59□□□□□ -0.39
SNRPA1-201ENST00000254193 POM121L12Q8N7R1 296 aa12.59□□□□□ -0.39
SNRPA1-201ENST00000254193 C15orf53Q8NAA6 179 aa12.59□□□□□ -0.39
SNRPA1-201ENST00000254193 TRGV11A0A075B6L2 103 aa12.58□□□□□ -0.4
SNRPA1-201ENST00000254193 FBLL1A6NHQ2 334 aaKnown RBP12.58□□□□□ -0.4
SNRPA1-201ENST00000254193 NUDT3O95989 172 aa12.58□□□□□ -0.4
SNRPA1-201ENST00000254193 GCGP01275 180 aa12.58□□□□□ -0.4
SNRPA1-201ENST00000254193 DPPA3Q6W0C5 159 aa12.58□□□□□ -0.4
SNRPA1-201ENST00000254193 TRAV26-1A0A087WT03 109 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms