RNA–Protein interactions for RNA: ENST00000249923.7

COPB1-201, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-201ENST00000249923 MYO9AB2RTY4 2548 aa7.86□□□□□ -1.15
COPB1-201ENST00000249923 IGHV7-81A0A0B4J1V7 117 aa7.85□□□□□ -1.15
COPB1-201ENST00000249923 TTC9CQ8N5M4 171 aa7.85□□□□□ -1.15
COPB1-201ENST00000249923 VGLL1Q99990 258 aa7.85□□□□□ -1.15
COPB1-201ENST00000249923 H3BMG7 143 aa7.85□□□□□ -1.15
COPB1-201ENST00000249923 GAS8-AS1O95177 125 aa7.85□□□□□ -1.15
COPB1-201ENST00000249923 CLEC3BP05452 202 aa7.85□□□□□ -1.15
COPB1-201ENST00000249923 EMP1P54849 157 aa7.85□□□□□ -1.15
COPB1-201ENST00000249923 PAX8Q06710 450 aa7.85□□□□□ -1.15
COPB1-201ENST00000249923 LYPD1Q8N2G4 141 aa7.85□□□□□ -1.15
COPB1-201ENST00000249923 JMJD8Q96S16 334 aa7.85□□□□□ -1.15
COPB1-201ENST00000249923 RAXQ9Y2V3 346 aa7.85□□□□□ -1.15
COPB1-201ENST00000249923 TSSC4Q9Y5U2 329 aaPredicted RBP7.85□□□□□ -1.15
COPB1-201ENST00000249923 A0A1B0GWB2 263 aa7.84□□□□□ -1.15
COPB1-201ENST00000249923 M0R1W7 72 aa7.84□□□□□ -1.15
COPB1-201ENST00000249923 ORMDL3Q8N138 153 aa7.84□□□□□ -1.15
COPB1-201ENST00000249923 ZNF48Q96MX3 618 aaPredicted RBP7.84□□□□□ -1.15
COPB1-201ENST00000249923 SCRT2Q9NQ03 307 aa7.84□□□□□ -1.15
COPB1-201ENST00000249923 AGRNO00468 2067 aa7.84□□□□□ -1.15
COPB1-201ENST00000249923 LINC01548A6NM66 108 aa7.84□□□□□ -1.15
COPB1-201ENST00000249923 SH2D1AO60880 128 aa7.84□□□□□ -1.15
COPB1-201ENST00000249923 COX8AP10176 69 aa7.84□□□□□ -1.15
COPB1-201ENST00000249923 ADAMTSL5Q6ZMM2 481 aa7.84□□□□□ -1.15
COPB1-201ENST00000249923 ZNF747Q9BV97 191 aa7.84□□□□□ -1.15
COPB1-201ENST00000249923 SIGLEC8Q9NYZ4 499 aa7.84□□□□□ -1.15
COPB1-201ENST00000249923 APOMO95445 188 aa7.84□□□□□ -1.15
COPB1-201ENST00000249923 SRSF9Q13242 221 aaKnown RBP eCLIP7.84□□□□□ -1.151e-11■■■■□ 22.6
COPB1-201ENST00000249923 ZC2HC1BQ5TFG8 222 aa7.84□□□□□ -1.15
COPB1-201ENST00000249923 ZNF493Q6ZR52 646 aa7.84□□□□□ -1.15
COPB1-201ENST00000249923 SCGB1C2P0DMR2 95 aa7.83□□□□□ -1.16
COPB1-201ENST00000249923 AZU1P20160 251 aa7.83□□□□□ -1.16
COPB1-201ENST00000249923 EBI3Q14213 229 aa7.83□□□□□ -1.16
COPB1-201ENST00000249923 Q8N9W7 124 aa7.83□□□□□ -1.16
COPB1-201ENST00000249923 C21orf62Q9NYP8 219 aa7.83□□□□□ -1.16
COPB1-201ENST00000249923 TRAV26-2A0A0B4J265 109 aa7.83□□□□□ -1.16
COPB1-201ENST00000249923 PRAC2D3DTV9 90 aa7.83□□□□□ -1.16
COPB1-201ENST00000249923 J3QR89 54 aa7.83□□□□□ -1.16
COPB1-201ENST00000249923 COX8CQ7Z4L0 72 aa7.83□□□□□ -1.16
COPB1-201ENST00000249923 SIRPDQ9H106 197 aa7.83□□□□□ -1.16
COPB1-201ENST00000249923 TLN2Q9Y4G6 2542 aa7.83□□□□□ -1.16
COPB1-201ENST00000249923 PDE6HQ13956 83 aa7.83□□□□□ -1.16
COPB1-201ENST00000249923 LINC01545Q5VT33 79 aa7.83□□□□□ -1.16
COPB1-201ENST00000249923 PRR25Q96S07 402 aa7.83□□□□□ -1.16
COPB1-201ENST00000249923 RAB1BQ9H0U4 201 aa7.83□□□□□ -1.16
COPB1-201ENST00000249923 U3KQK5 164 aa7.83□□□□□ -1.16
COPB1-201ENST00000249923 NPYP01303 97 aa7.82□□□□□ -1.16
COPB1-201ENST00000249923 HBDP02042 147 aa7.82□□□□□ -1.16
COPB1-201ENST00000249923 FXYD2P54710 66 aa7.82□□□□□ -1.16
COPB1-201ENST00000249923 MFAP4P55083 255 aa7.82□□□□□ -1.16
COPB1-201ENST00000249923 WFDC2Q14508 124 aa7.82□□□□□ -1.16
COPB1-201ENST00000249923 CYSLTR1Q9Y271 337 aa7.82□□□□□ -1.16
COPB1-201ENST00000249923 TRAV40A0A0B4J280 105 aa7.82□□□□□ -1.16
COPB1-201ENST00000249923 CLPSL1A2RUU4 121 aa7.82□□□□□ -1.16
COPB1-201ENST00000249923 C9orf118A6NHY6 69 aa7.82□□□□□ -1.16
COPB1-201ENST00000249923 SMAD7O15105 426 aaKnown RBP7.82□□□□□ -1.16
COPB1-201ENST00000249923 RPL7P18124 248 aaKnown RBP7.82□□□□□ -1.16
COPB1-201ENST00000249923 S100A4P26447 101 aaKnown RBP7.82□□□□□ -1.16
COPB1-201ENST00000249923 SEC11AP67812 179 aa7.82□□□□□ -1.16
COPB1-201ENST00000249923 ECSCRQ19T08 205 aa7.82□□□□□ -1.16
COPB1-201ENST00000249923 Q6ZQT7 251 aa7.82□□□□□ -1.16
COPB1-201ENST00000249923 COL25A1Q9BXS0 654 aaPredicted RBP7.82□□□□□ -1.16
COPB1-201ENST00000249923 ZANQ9Y493 2812 aa7.82□□□□□ -1.16
COPB1-201ENST00000249923 MGPP08493 103 aa7.82□□□□□ -1.16
COPB1-201ENST00000249923 ATP5G2Q06055 141 aa7.82□□□□□ -1.16
COPB1-201ENST00000249923 ERCC8Q13216 396 aa7.82□□□□□ -1.16
COPB1-201ENST00000249923 ZFAND3Q9H8U3 227 aa7.82□□□□□ -1.16
COPB1-201ENST00000249923 CEACAM3P40198 252 aa7.81□□□□□ -1.16
COPB1-201ENST00000249923 SPANXN1Q5VSR9 72 aa7.81□□□□□ -1.16
COPB1-201ENST00000249923 C2orf91Q6ZV80 131 aa7.81□□□□□ -1.16
COPB1-201ENST00000249923 RNF182Q8N6D2 247 aa7.81□□□□□ -1.16
COPB1-201ENST00000249923 MS4A6AQ9H2W1 248 aa7.81□□□□□ -1.16
COPB1-201ENST00000249923 M0R381 172 aa7.81□□□□□ -1.16
COPB1-201ENST00000249923 DTX2Q86UW9 622 aa7.81□□□□□ -1.16
COPB1-201ENST00000249923 CCDC140Q96MF4 163 aa7.81□□□□□ -1.16
COPB1-201ENST00000249923 SIGMAR1Q99720 223 aa7.81□□□□□ -1.16
COPB1-201ENST00000249923 MAP1LC3AQ9H492 121 aa7.81□□□□□ -1.16
COPB1-201ENST00000249923 HSD52Q0P140 79 aa7.8□□□□□ -1.16
COPB1-201ENST00000249923 MRPL51Q4U2R6 128 aaKnown RBP7.8□□□□□ -1.16
COPB1-201ENST00000249923 FAM104BQ5XKR9 115 aa7.8□□□□□ -1.16
COPB1-201ENST00000249923 ZNF479Q96JC4 524 aa7.8□□□□□ -1.16
COPB1-201ENST00000249923 CACNA1AO00555 2505 aa7.8□□□□□ -1.16
COPB1-201ENST00000249923 CUBNO60494 3623 aa7.8□□□□□ -1.16
COPB1-201ENST00000249923 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.8□□□□□ -1.16
COPB1-201ENST00000249923 IGLC6P0CF74 106 aa7.8□□□□□ -1.16
COPB1-201ENST00000249923 ANXA2RQ3ZCQ2 193 aa7.8□□□□□ -1.16
COPB1-201ENST00000249923 MYOZ3Q8TDC0 251 aa7.8□□□□□ -1.16
COPB1-201ENST00000249923 A0A1W2PPM0 123 aa7.8□□□□□ -1.16
COPB1-201ENST00000249923 G3V318 75 aa7.8□□□□□ -1.16
COPB1-201ENST00000249923 K7EP34 96 aa7.8□□□□□ -1.16
COPB1-201ENST00000249923 TMEM158Q8WZ71 300 aa7.8□□□□□ -1.16
COPB1-201ENST00000249923 TIMD4Q96H15 378 aa7.8□□□□□ -1.16
COPB1-201ENST00000249923 BEX4Q9NWD9 120 aaPredicted RBP7.8□□□□□ -1.16
COPB1-201ENST00000249923 LINC00527Q9UJ94 153 aa7.8□□□□□ -1.16
COPB1-201ENST00000249923 ATP6V0E1O15342 81 aa7.79□□□□□ -1.16
COPB1-201ENST00000249923 EFNA4P52798 201 aa7.79□□□□□ -1.16
COPB1-201ENST00000249923 C15orf32Q32M92 178 aa7.79□□□□□ -1.16
COPB1-201ENST00000249923 C1orf122Q6ZSJ8 110 aa7.79□□□□□ -1.16
COPB1-201ENST00000249923 RNF185Q96GF1 192 aa7.79□□□□□ -1.16
COPB1-201ENST00000249923 CHAC1Q9BUX1 264 aa7.79□□□□□ -1.16
COPB1-201ENST00000249923 C11orf21Q9P2W6 132 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms