RNA–Protein interactions for RNA: ENST00000249064.8

CCDC117-201, Transcript of coiled-coil domain containing 117, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC117, Length 3,985 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC117-201ENST00000249064 KIR2DL4Q99706 377 aa10.56□□□□□ -0.72
CCDC117-201ENST00000249064 CHD8Q9HCK8 2581 aa10.55□□□□□ -0.72
CCDC117-201ENST00000249064 SVIPQ8NHG7 77 aa10.55□□□□□ -0.72
CCDC117-201ENST00000249064 FAM215AQ9Y5M1 114 aa10.55□□□□□ -0.72
CCDC117-201ENST00000249064 A0A0U1RRA0 63 aa10.55□□□□□ -0.72
CCDC117-201ENST00000249064 SEM1Q6ZVN7 128 aa10.55□□□□□ -0.72
CCDC117-201ENST00000249064 RNF125Q96EQ8 232 aa10.55□□□□□ -0.72
CCDC117-201ENST00000249064 TRAV8-4A0A0B4J246 113 aa10.55□□□□□ -0.72
CCDC117-201ENST00000249064 A0A1B0GXF2 115 aa10.55□□□□□ -0.72
CCDC117-201ENST00000249064 ATP5IP56385 69 aaPredicted RBP10.55□□□□□ -0.72
CCDC117-201ENST00000249064 KLF12Q9Y4X4 402 aa10.55□□□□□ -0.72
CCDC117-201ENST00000249064 PHLDA3Q9Y5J5 127 aa10.55□□□□□ -0.72
CCDC117-201ENST00000249064 IGLV1-44P01699 117 aa10.54□□□□□ -0.72
CCDC117-201ENST00000249064 ECSCRQ19T08 205 aa10.54□□□□□ -0.72
CCDC117-201ENST00000249064 MEIG1Q5JSS6 88 aa10.54□□□□□ -0.72
CCDC117-201ENST00000249064 GFRA4Q9GZZ7 299 aa10.54□□□□□ -0.72
CCDC117-201ENST00000249064 PRO3102Q9H379 93 aa10.54□□□□□ -0.72
CCDC117-201ENST00000249064 CACNA1AO00555 2505 aa10.54□□□□□ -0.72
CCDC117-201ENST00000249064 SPTBN4Q9H254 2564 aa10.54□□□□□ -0.72
CCDC117-201ENST00000249064 CNTFRP26992 372 aa10.54□□□□□ -0.72
CCDC117-201ENST00000249064 ZNF56Q15929 161 aa10.54□□□□□ -0.72
CCDC117-201ENST00000249064 LINC00312Q9Y6C7 94 aa10.54□□□□□ -0.72
CCDC117-201ENST00000249064 PRR30Q53SZ7 412 aaPredicted RBP10.54□□□□□ -0.72
CCDC117-201ENST00000249064 KLHL30-AS1Q8NEE0 82 aa10.54□□□□□ -0.72
CCDC117-201ENST00000249064 ZNF492Q9P255 531 aa10.54□□□□□ -0.72
CCDC117-201ENST00000249064 CSPG4Q6UVK1 2322 aa10.54□□□□□ -0.72
CCDC117-201ENST00000249064 FNDC10F2Z333 226 aa10.53□□□□□ -0.72
CCDC117-201ENST00000249064 CD3EP07766 207 aa10.53□□□□□ -0.72
CCDC117-201ENST00000249064 ERCC8Q13216 396 aa10.53□□□□□ -0.72
CCDC117-201ENST00000249064 FABP5P3A8MUU1 101 aa10.53□□□□□ -0.72
CCDC117-201ENST00000249064 CRXO43186 299 aaPredicted RBP10.53□□□□□ -0.72
CCDC117-201ENST00000249064 LAGE3Q14657 143 aa10.53□□□□□ -0.72
CCDC117-201ENST00000249064 ZFP2Q6ZN57 461 aa10.53□□□□□ -0.72
CCDC117-201ENST00000249064 CT83Q5H943 113 aa10.53□□□□□ -0.72
CCDC117-201ENST00000249064 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.53□□□□□ -0.72
CCDC117-201ENST00000249064 C1orf159Q96HA4 380 aa10.53□□□□□ -0.72
CCDC117-201ENST00000249064 MBD3L4A6NDZ8 208 aaPredicted RBP10.52□□□□□ -0.72
CCDC117-201ENST00000249064 MBD3L3A6NE82 208 aaPredicted RBP10.52□□□□□ -0.72
CCDC117-201ENST00000249064 MBD3L5A6NJ08 208 aaPredicted RBP10.52□□□□□ -0.72
CCDC117-201ENST00000249064 SIVA1O15304 175 aa10.52□□□□□ -0.72
CCDC117-201ENST00000249064 Q6ZUT4 128 aa10.52□□□□□ -0.72
CCDC117-201ENST00000249064 Q71RC1 249 aaPredicted RBP10.52□□□□□ -0.72
CCDC117-201ENST00000249064 MBD3L2Q8NHZ7 208 aaPredicted RBP10.52□□□□□ -0.72
CCDC117-201ENST00000249064 NTN5Q8WTR8 489 aaPredicted RBP10.52□□□□□ -0.72
CCDC117-201ENST00000249064 SRSF1Q07955 248 aaKnown RBP eCLIP10.52□□□□□ -0.73
CCDC117-201ENST00000249064 ADIPOQQ15848 244 aa10.52□□□□□ -0.73
CCDC117-201ENST00000249064 MRPL23Q16540 153 aaKnown RBP10.52□□□□□ -0.73
CCDC117-201ENST00000249064 A0A0G2JNJ9 132 aa10.51□□□□□ -0.73
CCDC117-201ENST00000249064 COX6CP09669 75 aa10.51□□□□□ -0.73
CCDC117-201ENST00000249064 IFITM1P13164 125 aa10.51□□□□□ -0.73
CCDC117-201ENST00000249064 APOBEC3AP31941 199 aaPredicted RBP10.51□□□□□ -0.73
CCDC117-201ENST00000249064 NDUFA4L2Q9NRX3 87 aa10.51□□□□□ -0.73
CCDC117-201ENST00000249064 Q9UFV3 132 aa10.51□□□□□ -0.73
CCDC117-201ENST00000249064 FAM208BQ5VWN6 2430 aa10.51□□□□□ -0.73
CCDC117-201ENST00000249064 ZNF688P0C7X2 276 aa10.51□□□□□ -0.73
CCDC117-201ENST00000249064 PPP1R27Q86WC6 154 aa10.51□□□□□ -0.73
CCDC117-201ENST00000249064 FAM57AQ8TBR7 257 aa10.51□□□□□ -0.73
CCDC117-201ENST00000249064 PRADC1Q9BSG0 188 aa10.51□□□□□ -0.73
CCDC117-201ENST00000249064 HLA-DMBP28068 263 aa10.51□□□□□ -0.73
CCDC117-201ENST00000249064 PRSS46E5RG02 174 aa10.5□□□□□ -0.73
CCDC117-201ENST00000249064 RS1O15537 224 aa10.5□□□□□ -0.73
CCDC117-201ENST00000249064 XGP55808 180 aa10.5□□□□□ -0.73
CCDC117-201ENST00000249064 RITA1Q96K30 269 aa10.5□□□□□ -0.73
CCDC117-201ENST00000249064 ERG28Q9UKR5 140 aa10.5□□□□□ -0.73
CCDC117-201ENST00000249064 PCSK5Q92824 1860 aa10.5□□□□□ -0.73
CCDC117-201ENST00000249064 TM4SF5O14894 197 aa10.5□□□□□ -0.73
CCDC117-201ENST00000249064 IGKV3D-20A0A0C4DH25 116 aa10.49□□□□□ -0.73
CCDC117-201ENST00000249064 MAPKAPK5-AS1Q8N8E1 139 aa10.49□□□□□ -0.73
CCDC117-201ENST00000249064 RNASE6Q93091 150 aaKnown RBP10.49□□□□□ -0.73
CCDC117-201ENST00000249064 MYMXA0A1B0GTQ4 84 aa10.49□□□□□ -0.73
CCDC117-201ENST00000249064 MFAP4P55083 255 aa10.49□□□□□ -0.73
CCDC117-201ENST00000249064 EIF4EBP1Q13541 118 aaPredicted RBP10.49□□□□□ -0.73
CCDC117-201ENST00000249064 SMPXQ9UHP9 88 aa10.49□□□□□ -0.73
CCDC117-201ENST00000249064 TET2Q6N021 2002 aaPredicted RBP10.49□□□□□ -0.73
CCDC117-201ENST00000249064 H7C1H1 209 aa10.49□□□□□ -0.73
CCDC117-201ENST00000249064 IGKV3-20P01619 116 aa10.49□□□□□ -0.73
CCDC117-201ENST00000249064 TCF15Q12870 199 aa10.49□□□□□ -0.73
CCDC117-201ENST00000249064 C14orf178Q8N769 122 aaPredicted RBP10.49□□□□□ -0.73
CCDC117-201ENST00000249064 C15orf53Q8NAA6 179 aa10.49□□□□□ -0.73
CCDC117-201ENST00000249064 C16orf92Q96LL3 132 aa10.49□□□□□ -0.73
CCDC117-201ENST00000249064 SLC25A20O43772 301 aa10.48□□□□□ -0.73
CCDC117-201ENST00000249064 SHISA2Q6UWI4 295 aa10.48□□□□□ -0.73
CCDC117-201ENST00000249064 TRBV7-9A0A0J9YWB2 115 aa10.48□□□□□ -0.73
CCDC117-201ENST00000249064 TMEM178BH3BS89 294 aa10.48□□□□□ -0.73
CCDC117-201ENST00000249064 EGR2P11161 476 aaPredicted RBP10.48□□□□□ -0.73
CCDC117-201ENST00000249064 C2orf82Q6UX34 121 aa10.48□□□□□ -0.73
CCDC117-201ENST00000249064 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.48□□□□□ -0.73
CCDC117-201ENST00000249064 TCTEX1D4Q5JR98 221 aa10.48□□□□□ -0.73
CCDC117-201ENST00000249064 FAM159AQ6UWV7 190 aa10.48□□□□□ -0.73
CCDC117-201ENST00000249064 RNF182Q8N6D2 247 aa10.48□□□□□ -0.73
CCDC117-201ENST00000249064 OR11H6Q8NGC7 330 aa10.48□□□□□ -0.73
CCDC117-201ENST00000249064 DDB2Q92466 427 aa10.48□□□□□ -0.73
CCDC117-201ENST00000249064 TRGV9Q99603 122 aa10.48□□□□□ -0.73
CCDC117-201ENST00000249064 ACACBO00763 2458 aa10.47□□□□□ -0.73
CCDC117-201ENST00000249064 CCL21O00585 134 aa10.47□□□□□ -0.73
CCDC117-201ENST00000249064 PLNP26678 52 aa10.47□□□□□ -0.73
CCDC117-201ENST00000249064 TMEM167AQ8TBQ9 72 aa10.47□□□□□ -0.73
CCDC117-201ENST00000249064 TIMD4Q96H15 378 aa10.47□□□□□ -0.73
CCDC117-201ENST00000249064 KLRD1Q13241 179 aa10.47□□□□□ -0.73
CCDC117-201ENST00000249064 DTX2Q86UW9 622 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms