RNA–Protein interactions for RNA: ENST00000243253.7

SEC61A1-201, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC61A1, Length 3,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-201ENST00000243253 GAGE12BA1L429 117 aa9.27□□□□□ -0.93
SEC61A1-201ENST00000243253 SIVA1O15304 175 aa9.27□□□□□ -0.93
SEC61A1-201ENST00000243253 NPYP01303 97 aa9.27□□□□□ -0.93
SEC61A1-201ENST00000243253 SEC11AP67812 179 aa9.27□□□□□ -0.93
SEC61A1-201ENST00000243253 C7orf71A4D174 169 aa9.26□□□□□ -0.93
SEC61A1-201ENST00000243253 NBR2O15453 112 aa9.26□□□□□ -0.93
SEC61A1-201ENST00000243253 HIST2H2BDQ6DRA6 164 aa9.26□□□□□ -0.93
SEC61A1-201ENST00000243253 CLEC19AQ6UXS0 136 aa9.26□□□□□ -0.93
SEC61A1-201ENST00000243253 AAMDCQ9H7C9 122 aa9.26□□□□□ -0.93
SEC61A1-201ENST00000243253 IGLV2-18A0A075B6J9 118 aa9.26□□□□□ -0.93
SEC61A1-201ENST00000243253 CSN1S1P47710 185 aa9.26□□□□□ -0.93
SEC61A1-201ENST00000243253 TWIST1Q15672 202 aa9.26□□□□□ -0.93
SEC61A1-201ENST00000243253 LINC01548A6NM66 108 aa9.26□□□□□ -0.93
SEC61A1-201ENST00000243253 NRGNQ92686 78 aa9.26□□□□□ -0.93
SEC61A1-201ENST00000243253 NF1P21359 2839 aa9.26□□□□□ -0.93
SEC61A1-201ENST00000243253 H3BRM9 83 aa9.25□□□□□ -0.93
SEC61A1-201ENST00000243253 IGKV3-20P01619 116 aa9.25□□□□□ -0.93
SEC61A1-201ENST00000243253 VMO1Q7Z5L0 202 aa9.25□□□□□ -0.93
SEC61A1-201ENST00000243253 ORMDL3Q8N138 153 aa9.25□□□□□ -0.93
SEC61A1-201ENST00000243253 PRELID3AQ96N28 172 aa9.25□□□□□ -0.93
SEC61A1-201ENST00000243253 VGLL1Q99990 258 aa9.25□□□□□ -0.93
SEC61A1-201ENST00000243253 CTSGP08311 255 aa9.25□□□□□ -0.93
SEC61A1-201ENST00000243253 PEF1Q9UBV8 284 aaKnown RBP9.25□□□□□ -0.93
SEC61A1-201ENST00000243253 DOPEY1Q5JWR5 2465 aa9.25□□□□□ -0.93
SEC61A1-201ENST00000243253 PRRC2AP48634 2157 aaKnown RBP9.25□□□□□ -0.93
SEC61A1-201ENST00000243253 C9orf118A6NHY6 69 aa9.25□□□□□ -0.93
SEC61A1-201ENST00000243253 SMAD7O15105 426 aaKnown RBP9.25□□□□□ -0.93
SEC61A1-201ENST00000243253 ARL3P36405 182 aa9.25□□□□□ -0.93
SEC61A1-201ENST00000243253 AJUBAQ96IF1 538 aa9.25□□□□□ -0.93
SEC61A1-201ENST00000243253 MSRB1Q9NZV6 116 aa9.25□□□□□ -0.93
SEC61A1-201ENST00000243253 FBN2P35556 2912 aa9.24□□□□□ -0.93
SEC61A1-201ENST00000243253 PRSS47A8MTI9 375 aa9.24□□□□□ -0.93
SEC61A1-201ENST00000243253 EBI3Q14213 229 aa9.24□□□□□ -0.93
SEC61A1-201ENST00000243253 K7EQM0 130 aa9.24□□□□□ -0.93
SEC61A1-201ENST00000243253 CLEC3BP05452 202 aa9.24□□□□□ -0.93
SEC61A1-201ENST00000243253 HTN1P15515 57 aa9.24□□□□□ -0.93
SEC61A1-201ENST00000243253 CEACAM3P40198 252 aa9.24□□□□□ -0.93
SEC61A1-201ENST00000243253 PCP2Q8IVA1 136 aa9.24□□□□□ -0.93
SEC61A1-201ENST00000243253 BPESC1Q9GZL8 116 aa9.24□□□□□ -0.93
SEC61A1-201ENST00000243253 IGSF10Q6WRI0 2623 aa9.24□□□□□ -0.93
SEC61A1-201ENST00000243253 FASNP49327 2511 aaKnown RBP9.24□□□□□ -0.93
SEC61A1-201ENST00000243253 K7EMI3 77 aa9.24□□□□□ -0.93
SEC61A1-201ENST00000243253 HBDP02042 147 aa9.24□□□□□ -0.93
SEC61A1-201ENST00000243253 CACNG7P62955 275 aa9.24□□□□□ -0.93
SEC61A1-201ENST00000243253 C5orf64Q2M2E5 130 aa9.24□□□□□ -0.93
SEC61A1-201ENST00000243253 IGKV2D-26A0A0A0MRZ7 120 aa9.23□□□□□ -0.93
SEC61A1-201ENST00000243253 TMEM189A5PLL7 270 aa9.23□□□□□ -0.93
SEC61A1-201ENST00000243253 PRSS1P07477 247 aa9.23□□□□□ -0.93
SEC61A1-201ENST00000243253 ZFP36P26651 326 aaKnown RBP9.23□□□□□ -0.93
SEC61A1-201ENST00000243253 NEGR1Q7Z3B1 354 aa9.23□□□□□ -0.93
SEC61A1-201ENST00000243253 PHLDA1Q8WV24 401 aaPredicted RBP9.23□□□□□ -0.93
SEC61A1-201ENST00000243253 ARPC1AQ92747 370 aa9.23□□□□□ -0.93
SEC61A1-201ENST00000243253 C21orf62Q9NYP8 219 aa9.23□□□□□ -0.93
SEC61A1-201ENST00000243253 DKK2Q9UBU2 259 aa9.23□□□□□ -0.93
SEC61A1-201ENST00000243253 ZNF562Q6V9R5 426 aa9.23□□□□□ -0.93
SEC61A1-201ENST00000243253 DUX5Q96PT3 197 aa9.23□□□□□ -0.93
SEC61A1-201ENST00000243253 VKORC1Q9BQB6 163 aa9.23□□□□□ -0.93
SEC61A1-201ENST00000243253 K7ENP7 123 aa9.23□□□□□ -0.93
SEC61A1-201ENST00000243253 C15orf32Q32M92 178 aa9.23□□□□□ -0.93
SEC61A1-201ENST00000243253 Q6ZQT7 251 aa9.23□□□□□ -0.93
SEC61A1-201ENST00000243253 A0A1W2PPR1 153 aa9.22□□□□□ -0.93
SEC61A1-201ENST00000243253 ODF1Q14990 250 aa9.22□□□□□ -0.93
SEC61A1-201ENST00000243253 OR9G4Q8NGQ1 327 aa9.22□□□□□ -0.93
SEC61A1-201ENST00000243253 ZFAND3Q9H8U3 227 aa9.22□□□□□ -0.93
SEC61A1-201ENST00000243253 A1L4Q6 167 aa9.22□□□□□ -0.93
SEC61A1-201ENST00000243253 CLPSL1A2RUU4 121 aa9.22□□□□□ -0.93
SEC61A1-201ENST00000243253 RPL24P83731 157 aaKnown RBP9.22□□□□□ -0.93
SEC61A1-201ENST00000243253 GATA1P15976 413 aaPredicted RBP9.22□□□□□ -0.93
SEC61A1-201ENST00000243253 SCGB2A2Q13296 93 aa9.22□□□□□ -0.93
SEC61A1-201ENST00000243253 LINC01559Q495D7 138 aa9.22□□□□□ -0.93
SEC61A1-201ENST00000243253 SFTA2Q6UW10 78 aa9.22□□□□□ -0.93
SEC61A1-201ENST00000243253 PRSS57Q6UWY2 283 aa9.22□□□□□ -0.93
SEC61A1-201ENST00000243253 IFI27L1Q96BM0 104 aa9.22□□□□□ -0.93
SEC61A1-201ENST00000243253 C11orf21Q9P2W6 132 aa9.22□□□□□ -0.93
SEC61A1-201ENST00000243253 CSTL1Q9H114 145 aa9.21□□□□□ -0.93
SEC61A1-201ENST00000243253 K7EP34 96 aa9.21□□□□□ -0.94
SEC61A1-201ENST00000243253 SAP30O75446 220 aa9.21□□□□□ -0.94
SEC61A1-201ENST00000243253 PRAC2D3DTV9 90 aa9.2□□□□□ -0.94
SEC61A1-201ENST00000243253 HSD52Q0P140 79 aa9.2□□□□□ -0.94
SEC61A1-201ENST00000243253 FBXL19-AS1Q494R0 122 aa9.2□□□□□ -0.94
SEC61A1-201ENST00000243253 CKS2P33552 79 aa9.2□□□□□ -0.94
SEC61A1-201ENST00000243253 MFAP4P55083 255 aa9.2□□□□□ -0.94
SEC61A1-201ENST00000243253 KIR3DS1Q14943 382 aa9.2□□□□□ -0.94
SEC61A1-201ENST00000243253 C11orf71Q6IPW1 123 aa9.2□□□□□ -0.94
SEC61A1-201ENST00000243253 FER1L6-AS1Q8NA97 138 aa9.2□□□□□ -0.94
SEC61A1-201ENST00000243253 TTTY13Q9BZ97 58 aa9.2□□□□□ -0.94
SEC61A1-201ENST00000243253 TRAV26-2A0A0B4J265 109 aa9.2□□□□□ -0.94
SEC61A1-201ENST00000243253 IGKV3D-20A0A0C4DH25 116 aa9.2□□□□□ -0.94
SEC61A1-201ENST00000243253 ADORA2A-AS1P86434 159 aa9.2□□□□□ -0.94
SEC61A1-201ENST00000243253 IGHV7-81A0A0B4J1V7 117 aa9.19□□□□□ -0.94
SEC61A1-201ENST00000243253 IGHV7-4-1A0A0J9YVY3 117 aa9.19□□□□□ -0.94
SEC61A1-201ENST00000243253 G3V4G9 280 aa9.19□□□□□ -0.94
SEC61A1-201ENST00000243253 M0R1W7 72 aa9.19□□□□□ -0.94
SEC61A1-201ENST00000243253 SAA4P35542 130 aa9.19□□□□□ -0.94
SEC61A1-201ENST00000243253 COL25A1Q9BXS0 654 aaPredicted RBP9.19□□□□□ -0.94
SEC61A1-201ENST00000243253 HIGD1BQ9P298 99 aa9.19□□□□□ -0.94
SEC61A1-201ENST00000243253 GNLYP22749 145 aa9.19□□□□□ -0.94
SEC61A1-201ENST00000243253 THYN1Q9P016 225 aa9.19□□□□□ -0.94
SEC61A1-201ENST00000243253 MSRB2Q9Y3D2 182 aa9.19□□□□□ -0.94
SEC61A1-201ENST00000243253 TRAV40A0A0B4J280 105 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms