RNA–Protein interactions for RNA: ENST00000239367.6

LRP11-201, Transcript of LDL receptor related protein 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRP11, Length 3,260 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP11-201ENST00000239367 F8W1H4 67 aa12.81□□□□□ -0.36
LRP11-201ENST00000239367 SS18L2Q9UHA2 77 aa12.81□□□□□ -0.36
LRP11-201ENST00000239367 HHLA3Q9XRX5 114 aa12.81□□□□□ -0.36
LRP11-201ENST00000239367 MT-ATP8P03928 68 aa12.8□□□□□ -0.36
LRP11-201ENST00000239367 THBDP07204 575 aa12.8□□□□□ -0.36
LRP11-201ENST00000239367 ZNF493Q6ZR52 646 aa12.8□□□□□ -0.36
LRP11-201ENST00000239367 RNF5Q99942 180 aa12.8□□□□□ -0.36
LRP11-201ENST00000239367 NCBP2LA6PVI3 153 aaKnown RBP12.8□□□□□ -0.36
LRP11-201ENST00000239367 BUB1B-PAK6H3BSN5 160 aa12.8□□□□□ -0.36
LRP11-201ENST00000239367 SCGB1C2P0DMR2 95 aa12.8□□□□□ -0.36
LRP11-201ENST00000239367 GATA3P23771 443 aa12.8□□□□□ -0.36
LRP11-201ENST00000239367 SVEP1Q4LDE5 3571 aa12.8□□□□□ -0.36
LRP11-201ENST00000239367 A0A0G2JNJ9 132 aa12.8□□□□□ -0.36
LRP11-201ENST00000239367 H3BRN7 92 aa12.8□□□□□ -0.36
LRP11-201ENST00000239367 K7EM74 188 aa12.8□□□□□ -0.36
LRP11-201ENST00000239367 Q9UFV3 132 aa12.8□□□□□ -0.36
LRP11-201ENST00000239367 RNF182Q8N6D2 247 aa12.79□□□□□ -0.36
LRP11-201ENST00000239367 SPATA25Q9BR10 227 aa12.79□□□□□ -0.36
LRP11-201ENST00000239367 ZNF491Q8N8L2 437 aa12.79□□□□□ -0.36
LRP11-201ENST00000239367 ONECUT1Q9UBC0 465 aa12.79□□□□□ -0.36
LRP11-201ENST00000239367 RALYQ9UKM9 306 aaKnown RBP12.79□□□□□ -0.36
LRP11-201ENST00000239367 TTC28Q96AY4 2481 aa12.78□□□□□ -0.36
LRP11-201ENST00000239367 LINC01549A6NIU2 74 aa12.78□□□□□ -0.36
LRP11-201ENST00000239367 HLA-DRB4P13762 266 aa12.78□□□□□ -0.36
LRP11-201ENST00000239367 HLA-DRB4X5D2U9 266 aa12.78□□□□□ -0.36
LRP11-201ENST00000239367 E9PLD3 99 aa12.78□□□□□ -0.36
LRP11-201ENST00000239367 TRGV3P03979 118 aa12.78□□□□□ -0.36
LRP11-201ENST00000239367 ZFP2Q6ZN57 461 aa12.78□□□□□ -0.36
LRP11-201ENST00000239367 LINC01548A6NM66 108 aa12.77□□□□□ -0.36
LRP11-201ENST00000239367 OR11H12B2RN74 326 aa12.77□□□□□ -0.36
LRP11-201ENST00000239367 HOXA3O43365 443 aaPredicted RBP12.77□□□□□ -0.36
LRP11-201ENST00000239367 OR11H1Q8NG94 326 aa12.77□□□□□ -0.36
LRP11-201ENST00000239367 OR11H2Q8NH07 326 aa12.77□□□□□ -0.36
LRP11-201ENST00000239367 PRR25Q96S07 402 aa12.77□□□□□ -0.36
LRP11-201ENST00000239367 CREBBPQ92793 2442 aa12.77□□□□□ -0.36
LRP11-201ENST00000239367 U3KQK5 164 aa12.77□□□□□ -0.37
LRP11-201ENST00000239367 TCTEX1D4Q5JR98 221 aa12.77□□□□□ -0.37
LRP11-201ENST00000239367 DTX2Q86UW9 622 aa12.77□□□□□ -0.37
LRP11-201ENST00000239367 MRAP2Q96G30 205 aa12.77□□□□□ -0.37
LRP11-201ENST00000239367 K7EIM0 57 aa12.76□□□□□ -0.37
LRP11-201ENST00000239367 MRPS12O15235 138 aaKnown RBP12.76□□□□□ -0.37
LRP11-201ENST00000239367 SPANXN1Q5VSR9 72 aa12.76□□□□□ -0.37
LRP11-201ENST00000239367 Q6ZQT7 251 aa12.76□□□□□ -0.37
LRP11-201ENST00000239367 ZNF48Q96MX3 618 aaPredicted RBP12.76□□□□□ -0.37
LRP11-201ENST00000239367 PDE6HQ13956 83 aa12.75□□□□□ -0.37
LRP11-201ENST00000239367 PHLDA1Q8WV24 401 aaPredicted RBP12.75□□□□□ -0.37
LRP11-201ENST00000239367 RNF183Q96D59 192 aa12.75□□□□□ -0.37
LRP11-201ENST00000239367 COL6A6A6NMZ7 2263 aa12.75□□□□□ -0.37
LRP11-201ENST00000239367 RRN3P1Q2M238 152 aa12.75□□□□□ -0.37
LRP11-201ENST00000239367 KLHL30-AS1Q8NEE0 82 aa12.75□□□□□ -0.37
LRP11-201ENST00000239367 PRTN3P24158 256 aa12.75□□□□□ -0.37
LRP11-201ENST00000239367 PRAC2D3DTV9 90 aa12.74□□□□□ -0.37
LRP11-201ENST00000239367 IGKV3-7A0A075B6H7 116 aa12.73□□□□□ -0.37
LRP11-201ENST00000239367 SHISA9B4DS77 424 aa12.73□□□□□ -0.37
LRP11-201ENST00000239367 LY6LH3BQJ8 138 aa12.73□□□□□ -0.37
LRP11-201ENST00000239367 GFRALQ6UXV0 394 aa12.73□□□□□ -0.37
LRP11-201ENST00000239367 C1orf122Q6ZSJ8 110 aa12.73□□□□□ -0.37
LRP11-201ENST00000239367 C8orf86Q6ZUL3 223 aa12.73□□□□□ -0.37
LRP11-201ENST00000239367 M0R381 172 aa12.73□□□□□ -0.37
LRP11-201ENST00000239367 RAXQ9Y2V3 346 aa12.73□□□□□ -0.37
LRP11-201ENST00000239367 E7EQL1 145 aa12.73□□□□□ -0.37
LRP11-201ENST00000239367 TIMM23O14925 209 aa12.73□□□□□ -0.37
LRP11-201ENST00000239367 COX8CQ7Z4L0 72 aa12.73□□□□□ -0.37
LRP11-201ENST00000239367 RNF185Q96GF1 192 aa12.73□□□□□ -0.37
LRP11-201ENST00000239367 KIR2DL4Q99706 377 aa12.73□□□□□ -0.37
LRP11-201ENST00000239367 RAB1BQ9H0U4 201 aa12.73□□□□□ -0.37
LRP11-201ENST00000239367 NXT2Q9NPJ8 142 aaKnown RBP12.73□□□□□ -0.37
LRP11-201ENST00000239367 HIGD1BQ9P298 99 aa12.73□□□□□ -0.37
LRP11-201ENST00000239367 IL17RELQ6ZVW7 336 aa12.72□□□□□ -0.37
LRP11-201ENST00000239367 SCGB3A1Q96QR1 104 aa12.72□□□□□ -0.37
LRP11-201ENST00000239367 ANAPC13Q9BS18 74 aa12.72□□□□□ -0.37
LRP11-201ENST00000239367 ASH1LQ9NR48 2969 aaKnown RBP12.72□□□□□ -0.37
LRP11-201ENST00000239367 PRSS29PA6NIE9 313 aa12.72□□□□□ -0.37
LRP11-201ENST00000239367 ZNF815PA8K554 130 aa12.72□□□□□ -0.37
LRP11-201ENST00000239367 FABP5P3A8MUU1 101 aa12.72□□□□□ -0.37
LRP11-201ENST00000239367 B5MCH6 92 aa12.72□□□□□ -0.37
LRP11-201ENST00000239367 MGPP08493 103 aa12.72□□□□□ -0.37
LRP11-201ENST00000239367 FOXI1Q12951 378 aa12.72□□□□□ -0.37
LRP11-201ENST00000239367 LRBAP50851 2863 aa12.72□□□□□ -0.37
LRP11-201ENST00000239367 ATP5LO75964 103 aa12.72□□□□□ -0.37
LRP11-201ENST00000239367 LY6HO94772 140 aa12.72□□□□□ -0.37
LRP11-201ENST00000239367 RPL7P18124 248 aaKnown RBP12.71□□□□□ -0.37
LRP11-201ENST00000239367 TM2D2Q9BX73 214 aa12.71□□□□□ -0.37
LRP11-201ENST00000239367 FAM90A27PA6NNH2 459 aa12.71□□□□□ -0.38
LRP11-201ENST00000239367 DYNAPQ8N1N2 210 aa12.71□□□□□ -0.38
LRP11-201ENST00000239367 BEX4Q9NWD9 120 aaPredicted RBP12.71□□□□□ -0.38
LRP11-201ENST00000239367 TRBV20-1A0A075B6N2 111 aa12.7□□□□□ -0.38
LRP11-201ENST00000239367 XGP55808 180 aa12.7□□□□□ -0.38
LRP11-201ENST00000239367 NFE4Q86UQ8 179 aa12.7□□□□□ -0.38
LRP11-201ENST00000239367 CFHR4Q92496 578 aa12.7□□□□□ -0.38
LRP11-201ENST00000239367 B9A039 149 aa12.7□□□□□ -0.38
LRP11-201ENST00000239367 PAX8Q06710 450 aa12.7□□□□□ -0.38
LRP11-201ENST00000239367 LAGE3Q14657 143 aa12.7□□□□□ -0.38
LRP11-201ENST00000239367 SLC25A16P16260 332 aa12.7□□□□□ -0.38
LRP11-201ENST00000239367 PSMG4Q5JS54 123 aa12.7□□□□□ -0.38
LRP11-201ENST00000239367 RAX2Q96IS3 184 aa12.7□□□□□ -0.38
LRP11-201ENST00000239367 NBR2O15453 112 aa12.68□□□□□ -0.38
LRP11-201ENST00000239367 KLRD1Q13241 179 aa12.68□□□□□ -0.38
LRP11-201ENST00000239367 TMEM78Q5T7P6 136 aa12.68□□□□□ -0.38
LRP11-201ENST00000239367 MFAP4P55083 255 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms