RNA–Protein interactions for RNA: ENST00000239243.6

MSX2-201, Transcript of msh homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSX2, Length 2,241 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX2-201ENST00000239243 A0A087WW49 117 aa17.6■□□□□ 0.41
MSX2-201ENST00000239243 TRBV7-9A0A0J9YWB2 115 aa17.6■□□□□ 0.41
MSX2-201ENST00000239243 KLHDC1Q8N7A1 406 aa17.6■□□□□ 0.41
MSX2-201ENST00000239243 CHCHD1Q96BP2 118 aaKnown RBP17.6■□□□□ 0.41
MSX2-201ENST00000239243 FAM181BA6NEQ2 426 aa17.59■□□□□ 0.41
MSX2-201ENST00000239243 TSTD3H0UI37 97 aa17.59■□□□□ 0.41
MSX2-201ENST00000239243 CD5LO43866 347 aa17.59■□□□□ 0.41
MSX2-201ENST00000239243 PKIAP61925 76 aa17.59■□□□□ 0.41
MSX2-201ENST00000239243 PRR31Q5SQ13 230 aa17.59■□□□□ 0.41
MSX2-201ENST00000239243 NIT1Q86X76 327 aa17.59■□□□□ 0.41
MSX2-201ENST00000239243 ZNF575Q86XF7 245 aa17.59■□□□□ 0.41
MSX2-201ENST00000239243 OR8A1Q8NGG7 326 aa17.59■□□□□ 0.41
MSX2-201ENST00000239243 ZNF705DP0CH99 300 aaPredicted RBP17.59■□□□□ 0.41
MSX2-201ENST00000239243 ZNF705BP0CI00 300 aaPredicted RBP17.59■□□□□ 0.41
MSX2-201ENST00000239243 HOXD3P31249 432 aaPredicted RBP17.58■□□□□ 0.4
MSX2-201ENST00000239243 TWIST1Q15672 202 aa17.58■□□□□ 0.4
MSX2-201ENST00000239243 DCANP1Q8TF63 244 aa17.58■□□□□ 0.4
MSX2-201ENST00000239243 IGKV3D-20A0A0C4DH25 116 aa17.57■□□□□ 0.4
MSX2-201ENST00000239243 NTF3P20783 257 aa17.57■□□□□ 0.4
MSX2-201ENST00000239243 EDN2P20800 178 aa17.57■□□□□ 0.4
MSX2-201ENST00000239243 SYNJ2BPP57105 145 aa17.57■□□□□ 0.4
MSX2-201ENST00000239243 FAM104BQ5XKR9 115 aa17.57■□□□□ 0.4
MSX2-201ENST00000239243 MXRA5Q9NR99 2828 aa17.57■□□□□ 0.4
MSX2-201ENST00000239243 FAM19A2Q8N3H0 131 aa17.56■□□□□ 0.4
MSX2-201ENST00000239243 DNAJC9-AS1A6NH13 148 aa17.56■□□□□ 0.4
MSX2-201ENST00000239243 C11orf21Q9P2W6 132 aa17.56■□□□□ 0.4
MSX2-201ENST00000239243 M0R2Z0 102 aa17.55■□□□□ 0.4
MSX2-201ENST00000239243 SRD5A1P18405 259 aa17.55■□□□□ 0.4
MSX2-201ENST00000239243 ZFAND2AQ8N6M9 145 aa17.55■□□□□ 0.4
MSX2-201ENST00000239243 FAM19A4Q96LR4 140 aa17.55■□□□□ 0.4
MSX2-201ENST00000239243 TMEM191AQ9H0A3 160 aa17.55■□□□□ 0.4
MSX2-201ENST00000239243 TRAV21A0A0B4J279 112 aa17.55■□□□□ 0.4
MSX2-201ENST00000239243 M0QZ24 198 aa17.55■□□□□ 0.4
MSX2-201ENST00000239243 KRTAP1-1Q07627 177 aa17.55■□□□□ 0.4
MSX2-201ENST00000239243 MS4A6AQ9H2W1 248 aa17.55■□□□□ 0.4
MSX2-201ENST00000239243 LINC00587B1AMM8 73 aa17.54■□□□□ 0.4
MSX2-201ENST00000239243 LINC00614P0C842 121 aa17.54■□□□□ 0.4
MSX2-201ENST00000239243 KRTDAPP60985 99 aa17.54■□□□□ 0.4
MSX2-201ENST00000239243 SSTP61278 116 aa17.54■□□□□ 0.4
MSX2-201ENST00000239243 SCGB2A2Q13296 93 aa17.54■□□□□ 0.4
MSX2-201ENST00000239243 URB1-AS1Q96HZ7 61 aa17.54■□□□□ 0.4
MSX2-201ENST00000239243 NBPF19A0A087WUL8 3843 aa17.53■□□□□ 0.4
MSX2-201ENST00000239243 APRG1Q8IVJ8 170 aa17.53■□□□□ 0.4
MSX2-201ENST00000239243 YAE1D1Q9NRH1 226 aa17.53■□□□□ 0.4
MSX2-201ENST00000239243 HELZ2Q9BYK8 2649 aaKnown RBP17.53■□□□□ 0.4
MSX2-201ENST00000239243 MUC21A0A0G2JKD1 596 aa17.53■□□□□ 0.4
MSX2-201ENST00000239243 MUC21A0A140T8X8 626 aa17.53■□□□□ 0.4
MSX2-201ENST00000239243 CD33P20138 364 aa17.53■□□□□ 0.4
MSX2-201ENST00000239243 RAB4AP20338 218 aa17.53■□□□□ 0.4
MSX2-201ENST00000239243 SNRPD3P62318 126 aaKnown RBP17.53■□□□□ 0.4
MSX2-201ENST00000239243 MUC21Q5SSG8 566 aa17.53■□□□□ 0.4
MSX2-201ENST00000239243 AMN1Q8IY45 258 aa17.53■□□□□ 0.4
MSX2-201ENST00000239243 ORMDL3Q8N138 153 aa17.53■□□□□ 0.4
MSX2-201ENST00000239243 C4orf3Q8WVX3 66 aa17.53■□□□□ 0.4
MSX2-201ENST00000239243 U3KQK5 164 aa17.53■□□□□ 0.4
MSX2-201ENST00000239243 C2orf70A6NJV1 201 aa17.52■□□□□ 0.4
MSX2-201ENST00000239243 PRR9Q5T870 116 aa17.52■□□□□ 0.4
MSX2-201ENST00000239243 F6UB75 175 aa17.52■□□□□ 0.39
MSX2-201ENST00000239243 Q6ZSV7 163 aa17.52■□□□□ 0.39
MSX2-201ENST00000239243 WFDC3Q8IUB2 231 aa17.52■□□□□ 0.39
MSX2-201ENST00000239243 LINC01619G3V211 115 aa17.51■□□□□ 0.39
MSX2-201ENST00000239243 OR5AL1P0C617 328 aa17.51■□□□□ 0.39
MSX2-201ENST00000239243 ZNF664Q8N3J9 261 aa17.51■□□□□ 0.39
MSX2-201ENST00000239243 SELENOKQ9Y6D0 94 aa17.51■□□□□ 0.39
MSX2-201ENST00000239243 CCDC168Q8NDH2 2452 aa17.5■□□□□ 0.39
MSX2-201ENST00000239243 PDZD2O15018 2839 aa17.5■□□□□ 0.39
MSX2-201ENST00000239243 D6R8Y8 96 aa17.5■□□□□ 0.39
MSX2-201ENST00000239243 DEFB1P60022 68 aa17.5■□□□□ 0.39
MSX2-201ENST00000239243 MRPL51Q4U2R6 128 aaKnown RBP17.5■□□□□ 0.39
MSX2-201ENST00000239243 K7EQG2 157 aa17.49■□□□□ 0.39
MSX2-201ENST00000239243 DPF1Q92782 380 aa17.49■□□□□ 0.39
MSX2-201ENST00000239243 PRELID3AQ96N28 172 aa17.49■□□□□ 0.39
MSX2-201ENST00000239243 SNAI2O43623 268 aa17.49■□□□□ 0.39
MSX2-201ENST00000239243 CACNG7P62955 275 aa17.49■□□□□ 0.39
MSX2-201ENST00000239243 TEX43Q6ZNM6 134 aa17.49■□□□□ 0.39
MSX2-201ENST00000239243 WFDC12Q8WWY7 111 aa17.49■□□□□ 0.39
MSX2-201ENST00000239243 PRO1933Q9H354 126 aa17.49■□□□□ 0.39
MSX2-201ENST00000239243 PEMTQ9UBM1 199 aa17.49■□□□□ 0.39
MSX2-201ENST00000239243 FLNAP21333 2647 aaKnown RBP17.49■□□□□ 0.39
MSX2-201ENST00000239243 J3KRW8 73 aa17.48■□□□□ 0.39
MSX2-201ENST00000239243 PPBPP02775 128 aa17.48■□□□□ 0.39
MSX2-201ENST00000239243 C3orf79P0CE67 100 aa17.48■□□□□ 0.39
MSX2-201ENST00000239243 RNF114Q9Y508 228 aa17.48■□□□□ 0.39
MSX2-201ENST00000239243 TFPI2P48307 235 aa17.48■□□□□ 0.39
MSX2-201ENST00000239243 KHDC1LQ5JSQ8 128 aa17.48■□□□□ 0.39
MSX2-201ENST00000239243 SMIM15Q7Z3B0 74 aa17.48■□□□□ 0.39
MSX2-201ENST00000239243 IGHV1-24A0A0C4DH33 117 aa17.47■□□□□ 0.39
MSX2-201ENST00000239243 CKS2P33552 79 aa17.47■□□□□ 0.39
MSX2-201ENST00000239243 OR11H1Q8NG94 326 aa17.47■□□□□ 0.39
MSX2-201ENST00000239243 PRSS3P2Q8NHM4 247 aa17.47■□□□□ 0.39
MSX2-201ENST00000239243 ODF3Q96PU9 254 aa17.47■□□□□ 0.39
MSX2-201ENST00000239243 MSRB1Q9NZV6 116 aa17.47■□□□□ 0.39
MSX2-201ENST00000239243 IGHV4-4A0A075B6R2 117 aa17.47■□□□□ 0.39
MSX2-201ENST00000239243 CSN3P07498 182 aa17.47■□□□□ 0.39
MSX2-201ENST00000239243 ZNF688P0C7X2 276 aa17.47■□□□□ 0.39
MSX2-201ENST00000239243 SLURP1P55000 103 aa17.47■□□□□ 0.39
MSX2-201ENST00000239243 TCTEX1D4Q5JR98 221 aa17.47■□□□□ 0.39
MSX2-201ENST00000239243 PSMG4Q5JS54 123 aa17.47■□□□□ 0.39
MSX2-201ENST00000239243 AP5S1Q9NUS5 200 aa17.47■□□□□ 0.39
MSX2-201ENST00000239243 RNASE4P34096 147 aaKnown RBP17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms