RNA–Protein interactions for RNA: ENST00000212355.8

TGFBR3-201, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFBR3, Length 6,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-201ENST00000212355 NACAE9PAV3 2078 aa10.8□□□□□ -0.68
TGFBR3-201ENST00000212355 I3L3M4 83 aa10.8□□□□□ -0.68
TGFBR3-201ENST00000212355 NCOR1O75376 2440 aa10.8□□□□□ -0.68
TGFBR3-201ENST00000212355 ANAPC1Q9H1A4 1944 aa10.8□□□□□ -0.68
TGFBR3-201ENST00000212355 LYPD1Q8N2G4 141 aa10.8□□□□□ -0.68
TGFBR3-201ENST00000212355 FXYD5Q96DB9 178 aa10.8□□□□□ -0.68
TGFBR3-201ENST00000212355 KIAA1671Q9BY89 1806 aa10.8□□□□□ -0.68
TGFBR3-201ENST00000212355 WIPF2Q8TF74 440 aaPredicted RBP10.79□□□□□ -0.68
TGFBR3-201ENST00000212355 Q8N8P6 123 aa10.79□□□□□ -0.68
TGFBR3-201ENST00000212355 PRR25Q96S07 402 aa10.79□□□□□ -0.68
TGFBR3-201ENST00000212355 RNF5Q99942 180 aa10.79□□□□□ -0.68
TGFBR3-201ENST00000212355 DSCR9P59020 149 aa10.79□□□□□ -0.68
TGFBR3-201ENST00000212355 Q0VG73 95 aa10.79□□□□□ -0.68
TGFBR3-201ENST00000212355 ZNF561-AS1K7EIQ3 104 aa10.79□□□□□ -0.68
TGFBR3-201ENST00000212355 DYNAPQ8N1N2 210 aa10.79□□□□□ -0.68
TGFBR3-201ENST00000212355 GFRA4Q9GZZ7 299 aa10.79□□□□□ -0.68
TGFBR3-201ENST00000212355 IGHV2-70DA0A0C4DH43 119 aa10.78□□□□□ -0.68
TGFBR3-201ENST00000212355 Q6ZS49 121 aa10.78□□□□□ -0.68
TGFBR3-201ENST00000212355 PLXNA2O75051 1894 aa10.78□□□□□ -0.68
TGFBR3-201ENST00000212355 H3BRN7 92 aa10.78□□□□□ -0.68
TGFBR3-201ENST00000212355 UBE2E1P51965 193 aa10.78□□□□□ -0.68
TGFBR3-201ENST00000212355 NOTCH4Q99466 2003 aa10.78□□□□□ -0.68
TGFBR3-201ENST00000212355 F8WEM9 126 aa10.78□□□□□ -0.68
TGFBR3-201ENST00000212355 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.78□□□□□ -0.688e-8■■■■□ 21.1
TGFBR3-201ENST00000212355 LINC00173Q6ZV60 143 aa10.78□□□□□ -0.68
TGFBR3-201ENST00000212355 CGB3P0DN86 165 aa10.78□□□□□ -0.68
TGFBR3-201ENST00000212355 HAMPP81172 84 aa10.78□□□□□ -0.68
TGFBR3-201ENST00000212355 IGHV1OR15-1A0A075B7D0 117 aa10.78□□□□□ -0.68
TGFBR3-201ENST00000212355 IGLC2P0DOY2 106 aa10.78□□□□□ -0.68
TGFBR3-201ENST00000212355 IGLC3P0DOY3 106 aa10.78□□□□□ -0.68
TGFBR3-201ENST00000212355 XCL1P47992 114 aa10.78□□□□□ -0.68
TGFBR3-201ENST00000212355 DEFB1P60022 68 aa10.78□□□□□ -0.68
TGFBR3-201ENST00000212355 NOP10Q9NPE3 64 aaKnown RBP10.78□□□□□ -0.68
TGFBR3-201ENST00000212355 TRBV25-1A0A075B6N4 114 aa10.77□□□□□ -0.68
TGFBR3-201ENST00000212355 BVES-AS1Q5T3Y7 98 aa10.77□□□□□ -0.68
TGFBR3-201ENST00000212355 C9orf118A6NHY6 69 aa10.77□□□□□ -0.69
TGFBR3-201ENST00000212355 SCRT2Q9NQ03 307 aa10.77□□□□□ -0.69
TGFBR3-201ENST00000212355 KLF12Q9Y4X4 402 aa10.77□□□□□ -0.69
TGFBR3-201ENST00000212355 CEND1Q8N111 149 aa10.77□□□□□ -0.69
TGFBR3-201ENST00000212355 THAP8Q8NA92 274 aa10.77□□□□□ -0.69
TGFBR3-201ENST00000212355 PCP2Q8IVA1 136 aa10.77□□□□□ -0.69
TGFBR3-201ENST00000212355 HOXB4P17483 251 aaPredicted RBP10.76□□□□□ -0.69
TGFBR3-201ENST00000212355 C9orf153Q5TBE3 101 aa10.76□□□□□ -0.69
TGFBR3-201ENST00000212355 RPL39LQ96EH5 51 aaKnown RBP10.76□□□□□ -0.69
TGFBR3-201ENST00000212355 IGHV2-70P01814 119 aa10.76□□□□□ -0.69
TGFBR3-201ENST00000212355 CR1LQ2VPA4 569 aa10.76□□□□□ -0.69
TGFBR3-201ENST00000212355 NUPR1O60356 82 aa10.76□□□□□ -0.69
TGFBR3-201ENST00000212355 FGF23Q9GZV9 251 aaPredicted RBP10.76□□□□□ -0.69
TGFBR3-201ENST00000212355 OOSP1A8MZH6 123 aa10.76□□□□□ -0.69
TGFBR3-201ENST00000212355 EGR2P11161 476 aaPredicted RBP10.76□□□□□ -0.69
TGFBR3-201ENST00000212355 WT1P19544 449 aaPredicted RBP10.76□□□□□ -0.69
TGFBR3-201ENST00000212355 TDRG1Q3Y452 100 aa10.76□□□□□ -0.69
TGFBR3-201ENST00000212355 PRSS33Q8NF86 280 aa10.76□□□□□ -0.69
TGFBR3-201ENST00000212355 RPL32P62910 135 aaKnown RBP10.75□□□□□ -0.69
TGFBR3-201ENST00000212355 ANGP03950 147 aaKnown RBP10.75□□□□□ -0.69
TGFBR3-201ENST00000212355 SSC4DQ8WTU2 575 aa10.75□□□□□ -0.69
TGFBR3-201ENST00000212355 PRSS29PA6NIE9 313 aa10.75□□□□□ -0.69
TGFBR3-201ENST00000212355 IGHV4-59P01825 116 aa10.75□□□□□ -0.69
TGFBR3-201ENST00000212355 ABCA1O95477 2261 aa10.75□□□□□ -0.69
TGFBR3-201ENST00000212355 RNF166Q96A37 237 aaPredicted RBP10.75□□□□□ -0.69
TGFBR3-201ENST00000212355 Q9HAA7 133 aa10.75□□□□□ -0.69
TGFBR3-201ENST00000212355 K7ENP7 123 aa10.75□□□□□ -0.69
TGFBR3-201ENST00000212355 CCL25O15444 150 aa10.75□□□□□ -0.69
TGFBR3-201ENST00000212355 LMO1P25800 156 aa10.75□□□□□ -0.69
TGFBR3-201ENST00000212355 ZNF492Q9P255 531 aa10.75□□□□□ -0.69
TGFBR3-201ENST00000212355 FAM215AQ9Y5M1 114 aa10.75□□□□□ -0.69
TGFBR3-201ENST00000212355 NDUFA12Q9UI09 145 aa10.74□□□□□ -0.69
TGFBR3-201ENST00000212355 CDKN1BP46527 198 aa10.74□□□□□ -0.69
TGFBR3-201ENST00000212355 VOPP1Q96AW1 172 aa10.74□□□□□ -0.69
TGFBR3-201ENST00000212355 CTSZQ9UBR2 303 aa10.74□□□□□ -0.69
TGFBR3-201ENST00000212355 EML6Q6ZMW3 1958 aa10.74□□□□□ -0.69
TGFBR3-201ENST00000212355 IGLV10-54A0A075B6I4 117 aa10.74□□□□□ -0.69
TGFBR3-201ENST00000212355 GTF3C1Q12789 2109 aa10.73□□□□□ -0.69
TGFBR3-201ENST00000212355 C22orf46C9J442 243 aa10.73□□□□□ -0.69
TGFBR3-201ENST00000212355 SLURP1P55000 103 aa10.73□□□□□ -0.69
TGFBR3-201ENST00000212355 PDE6HQ13956 83 aa10.73□□□□□ -0.69
TGFBR3-201ENST00000212355 DAND5Q8N907 189 aa10.73□□□□□ -0.69
TGFBR3-201ENST00000212355 CRLF1O75462 422 aa10.73□□□□□ -0.69
TGFBR3-201ENST00000212355 NKAPP1Q8N9T2 125 aa10.73□□□□□ -0.69
TGFBR3-201ENST00000212355 TMEM126AQ9H061 195 aa10.73□□□□□ -0.69
TGFBR3-201ENST00000212355 CRYGCP07315 174 aa10.73□□□□□ -0.69
TGFBR3-201ENST00000212355 IGLC1P0CG04 106 aa10.73□□□□□ -0.69
TGFBR3-201ENST00000212355 COX8AP10176 69 aa10.73□□□□□ -0.69
TGFBR3-201ENST00000212355 CARD19Q96LW7 228 aa10.73□□□□□ -0.69
TGFBR3-201ENST00000212355 K7EP13 123 aa10.72□□□□□ -0.69
TGFBR3-201ENST00000212355 TMEM243Q9BU79 118 aa10.72□□□□□ -0.69
TGFBR3-201ENST00000212355 MSRB1Q9NZV6 116 aa10.72□□□□□ -0.69
TGFBR3-201ENST00000212355 IGKV1OR2-108A0A075B7D4 117 aa10.72□□□□□ -0.69
TGFBR3-201ENST00000212355 IGHV4-28A0A0C4DH34 117 aa10.72□□□□□ -0.69
TGFBR3-201ENST00000212355 YPEL3P61236 119 aaPredicted RBP10.72□□□□□ -0.69
TGFBR3-201ENST00000212355 E9PQ18 207 aa10.72□□□□□ -0.69
TGFBR3-201ENST00000212355 CGB7P0DN87 165 aa10.72□□□□□ -0.69
TGFBR3-201ENST00000212355 HIST2H2BDQ6DRA6 164 aa10.72□□□□□ -0.69
TGFBR3-201ENST00000212355 A0A1W2PPM0 123 aa10.72□□□□□ -0.69
TGFBR3-201ENST00000212355 CHD3Q12873 2000 aaKnown RBP10.72□□□□□ -0.69
TGFBR3-201ENST00000212355 C1QTNF4Q9BXJ3 329 aa10.72□□□□□ -0.69
TGFBR3-201ENST00000212355 NCKAP5O14513 1909 aa10.71□□□□□ -0.69
TGFBR3-201ENST00000212355 IGHV2-5P01817 119 aa10.71□□□□□ -0.69
TGFBR3-201ENST00000212355 DEFB112Q30KQ8 113 aa10.71□□□□□ -0.69
TGFBR3-201ENST00000212355 FNDC10F2Z333 226 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms