RNA–Protein interactions for RNA: ENST00000200181.7

ITGB4-201, Transcript of integrin subunit beta 4, humanhuman

TSL 1 (best) BASIC

Gene ITGB4, Length 5,919 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-201ENST00000200181 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.62□□□□□ -0.23
ITGB4-201ENST00000200181 IGKV2-29A2NJV5 120 aaPredicted RBP13.62□□□□□ -0.23
ITGB4-201ENST00000200181 FREM3P0C091 2139 aa13.62□□□□□ -0.23
ITGB4-201ENST00000200181 MAPK1IP1LQ8NDC0 245 aa13.62□□□□□ -0.23
ITGB4-201ENST00000200181 WT1-ASQ06250 92 aa13.61□□□□□ -0.23
ITGB4-201ENST00000200181 C11orf52Q96A22 123 aa13.61□□□□□ -0.23
ITGB4-201ENST00000200181 TPSG1Q9NRR2 321 aa13.61□□□□□ -0.23
ITGB4-201ENST00000200181 IGHV4-28A0A0C4DH34 117 aa13.61□□□□□ -0.23
ITGB4-201ENST00000200181 E9PQ18 207 aa13.61□□□□□ -0.23
ITGB4-201ENST00000200181 DYNAPQ8N1N2 210 aa13.6□□□□□ -0.23
ITGB4-201ENST00000200181 ARID2Q68CP9 1835 aa13.6□□□□□ -0.23
ITGB4-201ENST00000200181 ETDCA0A1B0GVM5 59 aa13.6□□□□□ -0.23
ITGB4-201ENST00000200181 ZNF747Q9BV97 191 aa13.6□□□□□ -0.23
ITGB4-201ENST00000200181 NYNRINQ9P2P1 1898 aaKnown RBP13.6□□□□□ -0.23
ITGB4-201ENST00000200181 CDPF1Q6NVV7 123 aa13.6□□□□□ -0.23
ITGB4-201ENST00000200181 COL11A2P13942 1736 aaPredicted RBP13.6□□□□□ -0.23
ITGB4-201ENST00000200181 TRAV4A0A0B4J268 109 aa13.6□□□□□ -0.23
ITGB4-201ENST00000200181 MP68P56378 58 aa13.6□□□□□ -0.23
ITGB4-201ENST00000200181 PCP2Q8IVA1 136 aa13.59□□□□□ -0.23
ITGB4-201ENST00000200181 Q6ZQT7 251 aa13.59□□□□□ -0.23
ITGB4-201ENST00000200181 LINC00311Q8N616 119 aa13.59□□□□□ -0.23
ITGB4-201ENST00000200181 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.59□□□□□ -0.23
ITGB4-201ENST00000200181 K7EMI3 77 aa13.59□□□□□ -0.23
ITGB4-201ENST00000200181 RPL18AQ02543 176 aaKnown RBP13.59□□□□□ -0.23
ITGB4-201ENST00000200181 DUX4L9Q6RFH8 374 aaPredicted RBP13.59□□□□□ -0.23
ITGB4-201ENST00000200181 NOP10Q9NPE3 64 aaKnown RBP13.59□□□□□ -0.23
ITGB4-201ENST00000200181 LRRC37AA6NMS7 1700 aa13.59□□□□□ -0.23
ITGB4-201ENST00000200181 A0A0J9YY99 117 aa13.59□□□□□ -0.23
ITGB4-201ENST00000200181 PRSS47A8MTI9 375 aa13.59□□□□□ -0.23
ITGB4-201ENST00000200181 SP5Q6BEB4 398 aaPredicted RBP13.59□□□□□ -0.23
ITGB4-201ENST00000200181 SVIPQ8NHG7 77 aa13.59□□□□□ -0.23
ITGB4-201ENST00000200181 LOC285556D6RIA3 1793 aa13.59□□□□□ -0.23
ITGB4-201ENST00000200181 IGKV3D-7A0A0C4DH55 119 aa13.58□□□□□ -0.24
ITGB4-201ENST00000200181 GNRH2O43555 120 aa13.58□□□□□ -0.24
ITGB4-201ENST00000200181 IGLC1P0CG04 106 aa13.58□□□□□ -0.24
ITGB4-201ENST00000200181 Q96MF0 132 aa13.58□□□□□ -0.24
ITGB4-201ENST00000200181 A0A0B4J2C4 111 aa13.58□□□□□ -0.24
ITGB4-201ENST00000200181 K7EN84 100 aa13.58□□□□□ -0.24
ITGB4-201ENST00000200181 LOXP28300 417 aaPredicted RBP13.58□□□□□ -0.24
ITGB4-201ENST00000200181 ADAMTS7Q9UKP4 1686 aa13.58□□□□□ -0.24
ITGB4-201ENST00000200181 FAM120AOSQ5T036 256 aa13.58□□□□□ -0.24
ITGB4-201ENST00000200181 FOXI2Q6ZQN5 318 aa13.58□□□□□ -0.24
ITGB4-201ENST00000200181 TEX48A0A1B0GUV7 120 aa13.58□□□□□ -0.24
ITGB4-201ENST00000200181 PSMB8P28062 276 aa13.58□□□□□ -0.24
ITGB4-201ENST00000200181 PDCD11Q14690 1871 aaKnown RBP13.58□□□□□ -0.24
ITGB4-201ENST00000200181 BUB3O43684 328 aa13.57□□□□□ -0.24
ITGB4-201ENST00000200181 U3KQE9 123 aa13.57□□□□□ -0.24
ITGB4-201ENST00000200181 RALGAPA2Q2PPJ7 1873 aa13.57□□□□□ -0.24
ITGB4-201ENST00000200181 A0A1B0GX51 115 aa13.57□□□□□ -0.24
ITGB4-201ENST00000200181 ATOX1O00244 68 aa13.57□□□□□ -0.24
ITGB4-201ENST00000200181 TAF1LQ8IZX4 1826 aa13.57□□□□□ -0.24
ITGB4-201ENST00000200181 LINC01545Q5VT33 79 aa13.57□□□□□ -0.24
ITGB4-201ENST00000200181 RTTNQ86VV8 2226 aa13.56□□□□□ -0.24
ITGB4-201ENST00000200181 SCN10AQ9Y5Y9 1956 aa13.56□□□□□ -0.24
ITGB4-201ENST00000200181 UNQ6494/PRO21346Q6UXR6 183 aa13.56□□□□□ -0.24
ITGB4-201ENST00000200181 WDR86Q86TI4 376 aa13.56□□□□□ -0.24
ITGB4-201ENST00000200181 NDUFB1O75438 58 aa13.56□□□□□ -0.24
ITGB4-201ENST00000200181 WIPF2Q8TF74 440 aaPredicted RBP13.56□□□□□ -0.24
ITGB4-201ENST00000200181 DKK4Q9UBT3 224 aa13.56□□□□□ -0.24
ITGB4-201ENST00000200181 IGLL5B9A064 214 aa13.56□□□□□ -0.24
ITGB4-201ENST00000200181 FHL1Q13642 323 aa13.56□□□□□ -0.24
ITGB4-201ENST00000200181 CR1LQ2VPA4 569 aa13.56□□□□□ -0.24
ITGB4-201ENST00000200181 Q6ZR03 302 aa13.56□□□□□ -0.24
ITGB4-201ENST00000200181 COX7B2Q8TF08 81 aa13.56□□□□□ -0.24
ITGB4-201ENST00000200181 ZFP2Q6ZN57 461 aa13.55□□□□□ -0.24
ITGB4-201ENST00000200181 DEFB125Q8N687 156 aa13.55□□□□□ -0.24
ITGB4-201ENST00000200181 ICOSQ9Y6W8 199 aa13.55□□□□□ -0.24
ITGB4-201ENST00000200181 J3KT08 172 aa13.55□□□□□ -0.24
ITGB4-201ENST00000200181 BAALCQ8WXS3 180 aa13.55□□□□□ -0.24
ITGB4-201ENST00000200181 FOXE3Q13461 319 aa13.55□□□□□ -0.24
ITGB4-201ENST00000200181 C5orf38Q86SI9 138 aa13.55□□□□□ -0.24
ITGB4-201ENST00000200181 VSIG2Q96IQ7 327 aa13.55□□□□□ -0.24
ITGB4-201ENST00000200181 Q9HAA7 133 aa13.55□□□□□ -0.24
ITGB4-201ENST00000200181 SPTA1P02549 2419 aa13.55□□□□□ -0.24
ITGB4-201ENST00000200181 COL5A3P25940 1745 aaPredicted RBP13.55□□□□□ -0.24
ITGB4-201ENST00000200181 FAM236AA0A1B0GUQ0 79 aa13.54□□□□□ -0.24
ITGB4-201ENST00000200181 FAM236BA0A1B0GV22 79 aa13.54□□□□□ -0.24
ITGB4-201ENST00000200181 H0YGX0 51 aa13.54□□□□□ -0.24
ITGB4-201ENST00000200181 C17orf77Q96MU5 243 aa13.54□□□□□ -0.24
ITGB4-201ENST00000200181 PKIGQ9Y2B9 76 aa13.54□□□□□ -0.24
ITGB4-201ENST00000200181 C15orf65H3BRN8 121 aa13.54□□□□□ -0.24
ITGB4-201ENST00000200181 J3QLI3 93 aa13.54□□□□□ -0.24
ITGB4-201ENST00000200181 C14orf132Q9NPU4 83 aa13.54□□□□□ -0.24
ITGB4-201ENST00000200181 C8orf31Q8N9H6 132 aa13.54□□□□□ -0.24
ITGB4-201ENST00000200181 FANCMQ8IYD8 2048 aa13.53□□□□□ -0.24
ITGB4-201ENST00000200181 MRPL23Q16540 153 aaKnown RBP13.53□□□□□ -0.24
ITGB4-201ENST00000200181 ZNF491Q8N8L2 437 aa13.53□□□□□ -0.24
ITGB4-201ENST00000200181 ELANEP08246 267 aa13.53□□□□□ -0.24
ITGB4-201ENST00000200181 ARTNQ5T4W7 220 aa13.53□□□□□ -0.24
ITGB4-201ENST00000200181 TP53BP1Q12888 1972 aaPredicted RBP13.53□□□□□ -0.24
ITGB4-201ENST00000200181 ZMAT4Q9H898 229 aa13.53□□□□□ -0.24
ITGB4-201ENST00000200181 BRCA1P38398 1863 aaKnown RBP13.53□□□□□ -0.24
ITGB4-201ENST00000200181 RBAKDNA6NC62 111 aa13.53□□□□□ -0.24
ITGB4-201ENST00000200181 NREPQ16612 68 aa13.52□□□□□ -0.24
ITGB4-201ENST00000200181 ZNF503Q96F45 646 aa13.52□□□□□ -0.24
ITGB4-201ENST00000200181 SND1-IT1Q9HBX3 110 aa13.52□□□□□ -0.24
ITGB4-201ENST00000200181 A0A0G2JMZ2 1700 aa13.52□□□□□ -0.24
ITGB4-201ENST00000200181 LRRC37A2A6NM11 1700 aa13.52□□□□□ -0.24
ITGB4-201ENST00000200181 TIRAPP58753 221 aa13.52□□□□□ -0.24
ITGB4-201ENST00000200181 DIAPH2-AS1Q14236 149 aa13.52□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 103.7 ms