RNA–Protein interactions for RNA: ENST00000161559.10

CEACAM1-201, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CEACAM1, Length 3,519 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-201ENST00000161559 PRR30Q53SZ7 412 aaPredicted RBP4.53□□□□□ -1.68
CEACAM1-201ENST00000161559 ZNF493Q6ZR52 646 aa4.53□□□□□ -1.68
CEACAM1-201ENST00000161559 TMEM158Q8WZ71 300 aa4.53□□□□□ -1.68
CEACAM1-201ENST00000161559 PSMG3-AS1Q96PY0 264 aa4.53□□□□□ -1.68
CEACAM1-201ENST00000161559 NDUFA3O95167 84 aa4.52□□□□□ -1.69
CEACAM1-201ENST00000161559 CT45A10P0DMU9 189 aa4.52□□□□□ -1.69
CEACAM1-201ENST00000161559 FABP2P12104 132 aa4.52□□□□□ -1.69
CEACAM1-201ENST00000161559 SAMD13Q5VXD3 122 aa4.52□□□□□ -1.69
CEACAM1-201ENST00000161559 IGFL2Q6UWQ7 119 aa4.52□□□□□ -1.69
CEACAM1-201ENST00000161559 IL17RELQ6ZVW7 336 aa4.52□□□□□ -1.69
CEACAM1-201ENST00000161559 DYNAPQ8N1N2 210 aa4.52□□□□□ -1.69
CEACAM1-201ENST00000161559 FAM169BQ8N8A8 192 aa4.52□□□□□ -1.69
CEACAM1-201ENST00000161559 PRR25Q96S07 402 aa4.52□□□□□ -1.69
CEACAM1-201ENST00000161559 MRPL35Q9NZE8 188 aaKnown RBP4.52□□□□□ -1.69
CEACAM1-201ENST00000161559 TMEM14CQ9P0S9 112 aa4.52□□□□□ -1.69
CEACAM1-201ENST00000161559 LRRK2Q5S007 2527 aa4.52□□□□□ -1.69
CEACAM1-201ENST00000161559 ZANQ9Y493 2812 aa4.52□□□□□ -1.69
CEACAM1-201ENST00000161559 FAM90A27PA6NNH2 459 aa4.52□□□□□ -1.69
CEACAM1-201ENST00000161559 RNF223E7ERA6 249 aa4.52□□□□□ -1.69
CEACAM1-201ENST00000161559 IGF1P05019 195 aa4.52□□□□□ -1.69
CEACAM1-201ENST00000161559 TNFRSF6BO95407 300 aa4.52□□□□□ -1.69
CEACAM1-201ENST00000161559 SMIM13P0DJ93 91 aa4.52□□□□□ -1.69
CEACAM1-201ENST00000161559 GRNP28799 593 aaKnown RBP4.52□□□□□ -1.69
CEACAM1-201ENST00000161559 CFHR4Q92496 578 aa4.52□□□□□ -1.69
CEACAM1-201ENST00000161559 ONECUT1Q9UBC0 465 aa4.52□□□□□ -1.69
CEACAM1-201ENST00000161559 ZNF462Q96JM2 2506 aa4.51□□□□□ -1.69
CEACAM1-201ENST00000161559 E7EQL1 145 aa4.51□□□□□ -1.69
CEACAM1-201ENST00000161559 TGFAP01135 160 aa4.51□□□□□ -1.69
CEACAM1-201ENST00000161559 MC5RP33032 325 aa4.51□□□□□ -1.69
CEACAM1-201ENST00000161559 HES1Q14469 280 aa4.51□□□□□ -1.69
CEACAM1-201ENST00000161559 CCDC144NLQ6NUI1 221 aa4.51□□□□□ -1.69
CEACAM1-201ENST00000161559 Q6ZS92 163 aa4.51□□□□□ -1.69
CEACAM1-201ENST00000161559 RNASE6Q93091 150 aaKnown RBP4.51□□□□□ -1.69
CEACAM1-201ENST00000161559 RPEQ96AT9 228 aa4.51□□□□□ -1.69
CEACAM1-201ENST00000161559 FANCD2OSQ96PS1 177 aa4.51□□□□□ -1.69
CEACAM1-201ENST00000161559 PRSS29PA6NIE9 313 aa4.51□□□□□ -1.69
CEACAM1-201ENST00000161559 FHL3Q13643 280 aa4.51□□□□□ -1.69
CEACAM1-201ENST00000161559 LINC00311Q8N616 119 aa4.51□□□□□ -1.69
CEACAM1-201ENST00000161559 GATD1Q8NB37 220 aa4.51□□□□□ -1.69
CEACAM1-201ENST00000161559 SPAG8Q99932 426 aaPredicted RBP4.51□□□□□ -1.69
CEACAM1-201ENST00000161559 DYNLRB1Q9NP97 96 aa4.51□□□□□ -1.69
CEACAM1-201ENST00000161559 SPANXB1Q9NS25 103 aaPredicted RBP4.51□□□□□ -1.69
CEACAM1-201ENST00000161559 FLNBO75369 2602 aaKnown RBP4.51□□□□□ -1.69
CEACAM1-201ENST00000161559 NIPBLQ6KC79 2804 aaeCLIP4.51□□□□□ -1.69
CEACAM1-201ENST00000161559 EMP1P54849 157 aa4.51□□□□□ -1.69
CEACAM1-201ENST00000161559 DTX2Q86UW9 622 aa4.51□□□□□ -1.69
CEACAM1-201ENST00000161559 OR9G4Q8NGQ1 327 aa4.51□□□□□ -1.69
CEACAM1-201ENST00000161559 PTH2Q96A98 100 aa4.51□□□□□ -1.69
CEACAM1-201ENST00000161559 C20orf78Q9BR46 151 aa4.51□□□□□ -1.69
CEACAM1-201ENST00000161559 IGKV3D-20A0A0C4DH25 116 aa4.5□□□□□ -1.69
CEACAM1-201ENST00000161559 IGLC6P0CF74 106 aa4.5□□□□□ -1.69
CEACAM1-201ENST00000161559 UFC1Q9Y3C8 167 aa4.5□□□□□ -1.69
CEACAM1-201ENST00000161559 ITPR1Q14643 2758 aa4.5□□□□□ -1.69
CEACAM1-201ENST00000161559 SORL1Q92673 2214 aa4.5□□□□□ -1.69
CEACAM1-201ENST00000161559 SHISA9B4DS77 424 aa4.5□□□□□ -1.69
CEACAM1-201ENST00000161559 IGLL5B9A064 214 aa4.5□□□□□ -1.69
CEACAM1-201ENST00000161559 K7EQM0 130 aa4.5□□□□□ -1.69
CEACAM1-201ENST00000161559 IGKCP01834 107 aa4.5□□□□□ -1.69
CEACAM1-201ENST00000161559 CEND1Q8N111 149 aa4.5□□□□□ -1.69
CEACAM1-201ENST00000161559 OR4X2Q8NGF9 303 aa4.5□□□□□ -1.69
CEACAM1-201ENST00000161559 GLMPQ8WWB7 406 aa4.5□□□□□ -1.69
CEACAM1-201ENST00000161559 AAMDCQ9H7C9 122 aa4.5□□□□□ -1.69
CEACAM1-201ENST00000161559 CENPEQ02224 2701 aa4.5□□□□□ -1.69
CEACAM1-201ENST00000161559 GAGE12HA6NDE8 117 aa4.5□□□□□ -1.69
CEACAM1-201ENST00000161559 NCBP2LA6PVI3 153 aaKnown RBP4.5□□□□□ -1.69
CEACAM1-201ENST00000161559 SMIM17P0DL12 118 aa4.5□□□□□ -1.69
CEACAM1-201ENST00000161559 C3orf36Q3SXR2 165 aa4.5□□□□□ -1.69
CEACAM1-201ENST00000161559 NUP37Q8NFH4 326 aa4.5□□□□□ -1.69
CEACAM1-201ENST00000161559 CYSLTR1Q9Y271 337 aa4.5□□□□□ -1.69
CEACAM1-201ENST00000161559 CCDC168Q8NDH2 2452 aa4.49□□□□□ -1.69
CEACAM1-201ENST00000161559 CEACAM3P40198 252 aa4.49□□□□□ -1.69
CEACAM1-201ENST00000161559 PRR9Q5T870 116 aa4.49□□□□□ -1.69
CEACAM1-201ENST00000161559 IGFL3Q6UXB1 125 aa4.49□□□□□ -1.69
CEACAM1-201ENST00000161559 ZMAT4Q9H898 229 aa4.49□□□□□ -1.69
CEACAM1-201ENST00000161559 NBPF19A0A087WUL8 3843 aa4.49□□□□□ -1.69
CEACAM1-201ENST00000161559 IGLV2-18A0A075B6J9 118 aa4.49□□□□□ -1.69
CEACAM1-201ENST00000161559 C12orf74Q32Q52 190 aa4.49□□□□□ -1.69
CEACAM1-201ENST00000161559 LINC01560Q8TB33 94 aa4.49□□□□□ -1.69
CEACAM1-201ENST00000161559 ZNF479Q96JC4 524 aa4.49□□□□□ -1.69
CEACAM1-201ENST00000161559 MAP1LC3AQ9H492 121 aa4.49□□□□□ -1.69
CEACAM1-201ENST00000161559 CTSGP08311 255 aa4.49□□□□□ -1.69
CEACAM1-201ENST00000161559 ZFP2Q6ZN57 461 aa4.49□□□□□ -1.69
CEACAM1-201ENST00000161559 NFE4Q86UQ8 179 aa4.49□□□□□ -1.69
CEACAM1-201ENST00000161559 KLHL30-AS1Q8NEE0 82 aa4.49□□□□□ -1.69
CEACAM1-201ENST00000161559 OR5A1Q8NGJ0 315 aa4.49□□□□□ -1.69
CEACAM1-201ENST00000161559 DPF1Q92782 380 aa4.49□□□□□ -1.69
CEACAM1-201ENST00000161559 RPL39LQ96EH5 51 aaKnown RBP4.49□□□□□ -1.69
CEACAM1-201ENST00000161559 E9PLD3 99 aa4.48□□□□□ -1.69
CEACAM1-201ENST00000161559 LY6LH3BQJ8 138 aa4.48□□□□□ -1.69
CEACAM1-201ENST00000161559 PRB1P04280 392 aa4.48□□□□□ -1.69
CEACAM1-201ENST00000161559 SMCPP49901 116 aaPredicted RBP4.48□□□□□ -1.69
CEACAM1-201ENST00000161559 CDSNQ15517 529 aa4.48□□□□□ -1.69
CEACAM1-201ENST00000161559 TMEM30BQ3MIR4 351 aa4.48□□□□□ -1.69
CEACAM1-201ENST00000161559 PLEKHB2Q96CS7 222 aa4.48□□□□□ -1.69
CEACAM1-201ENST00000161559 HIST1H4GQ99525 98 aa4.48□□□□□ -1.69
CEACAM1-201ENST00000161559 MUC4Q99102 2169 aa4.48□□□□□ -1.69
CEACAM1-201ENST00000161559 IGLV11-55A0A075B6I3 123 aa4.48□□□□□ -1.69
CEACAM1-201ENST00000161559 TRBV6-1A0A0K0K1D8 114 aa4.48□□□□□ -1.69
CEACAM1-201ENST00000161559 SIVA1O15304 175 aa4.48□□□□□ -1.69
CEACAM1-201ENST00000161559 NBR2O15453 112 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms