RNA–Protein interactions for RNA: ENST00000040584.5

HOXC8-201, Transcript of homeobox C8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC8, Length 1,889 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8-201ENST00000040584 IGHV3-74A0A0B4J1X5 117 aa16.78■□□□□ 0.28
HOXC8-201ENST00000040584 SERTM2A0A1B0GWG4 89 aa16.78■□□□□ 0.28
HOXC8-201ENST00000040584 APOHP02749 345 aaPredicted RBP16.78■□□□□ 0.28
HOXC8-201ENST00000040584 IGLC2P0DOY2 106 aa16.78■□□□□ 0.28
HOXC8-201ENST00000040584 FAM106AQ4KMX7 169 aa16.78■□□□□ 0.28
HOXC8-201ENST00000040584 C16orf54Q6UWD8 224 aa16.78■□□□□ 0.28
HOXC8-201ENST00000040584 LINC00322Q6ZN03 302 aaPredicted RBP16.78■□□□□ 0.28
HOXC8-201ENST00000040584 C8orf86Q6ZUL3 223 aa16.78■□□□□ 0.28
HOXC8-201ENST00000040584 DUX3Q96PT4 197 aa16.78■□□□□ 0.28
HOXC8-201ENST00000040584 IGHV3-66A0A0C4DH42 116 aa16.78■□□□□ 0.28
HOXC8-201ENST00000040584 IGLV2-11P01706 119 aa16.78■□□□□ 0.28
HOXC8-201ENST00000040584 C3orf79P0CE67 100 aa16.78■□□□□ 0.28
HOXC8-201ENST00000040584 KRTAP10-3P60369 221 aa16.78■□□□□ 0.28
HOXC8-201ENST00000040584 GOLT1AQ6ZVE7 132 aa16.78■□□□□ 0.28
HOXC8-201ENST00000040584 TCF24Q7RTU0 167 aa16.78■□□□□ 0.28
HOXC8-201ENST00000040584 OR11H1Q8NG94 326 aa16.78■□□□□ 0.28
HOXC8-201ENST00000040584 OR2D3Q8NGH3 330 aa16.78■□□□□ 0.28
HOXC8-201ENST00000040584 CHCHD1Q96BP2 118 aaKnown RBP16.78■□□□□ 0.28
HOXC8-201ENST00000040584 TSSC4Q9Y5U2 329 aaPredicted RBP16.78■□□□□ 0.28
HOXC8-201ENST00000040584 A0A1B0GW15 77 aa16.77■□□□□ 0.27
HOXC8-201ENST00000040584 EREGO14944 169 aa16.77■□□□□ 0.27
HOXC8-201ENST00000040584 MRPS12O15235 138 aaKnown RBP16.77■□□□□ 0.27
HOXC8-201ENST00000040584 HOXD3P31249 432 aaPredicted RBP16.77■□□□□ 0.27
HOXC8-201ENST00000040584 TDRG1Q3Y452 100 aa16.77■□□□□ 0.27
HOXC8-201ENST00000040584 PRNTQ86SH4 94 aa16.77■□□□□ 0.27
HOXC8-201ENST00000040584 GTSF1Q8WW33 167 aa16.77■□□□□ 0.27
HOXC8-201ENST00000040584 WFDC12Q8WWY7 111 aa16.77■□□□□ 0.27
HOXC8-201ENST00000040584 NDFIP1Q9BT67 221 aa16.77■□□□□ 0.27
HOXC8-201ENST00000040584 U3KQE9 123 aa16.77■□□□□ 0.27
HOXC8-201ENST00000040584 H3BTX0 84 aa16.76■□□□□ 0.27
HOXC8-201ENST00000040584 BUB3O43684 328 aa16.76■□□□□ 0.27
HOXC8-201ENST00000040584 NTF3P20783 257 aa16.76■□□□□ 0.27
HOXC8-201ENST00000040584 TM4SF20Q53R12 229 aa16.76■□□□□ 0.27
HOXC8-201ENST00000040584 EXOC3-AS1Q8N2X6 119 aa16.76■□□□□ 0.27
HOXC8-201ENST00000040584 OR1N2Q8NGR9 330 aa16.76■□□□□ 0.27
HOXC8-201ENST00000040584 C20orf202A1L168 122 aa16.76■□□□□ 0.27
HOXC8-201ENST00000040584 FBLL1A6NHQ2 334 aaKnown RBP16.76■□□□□ 0.27
HOXC8-201ENST00000040584 M0R2Z0 102 aa16.76■□□□□ 0.27
HOXC8-201ENST00000040584 DPF1Q92782 380 aa16.76■□□□□ 0.27
HOXC8-201ENST00000040584 PGLYRP4Q96LB8 373 aa16.76■□□□□ 0.27
HOXC8-201ENST00000040584 LINC01619G3V211 115 aa16.75■□□□□ 0.27
HOXC8-201ENST00000040584 CTRLP40313 264 aa16.75■□□□□ 0.27
HOXC8-201ENST00000040584 SLURP1P55000 103 aa16.75■□□□□ 0.27
HOXC8-201ENST00000040584 SYNJ2BPP57105 145 aa16.75■□□□□ 0.27
HOXC8-201ENST00000040584 PSG3Q16557 428 aa16.75■□□□□ 0.27
HOXC8-201ENST00000040584 Q6AWC8 147 aa16.75■□□□□ 0.27
HOXC8-201ENST00000040584 SIGLEC15Q6ZMC9 328 aa16.75■□□□□ 0.27
HOXC8-201ENST00000040584 FAM19A2Q8N3H0 131 aa16.75■□□□□ 0.27
HOXC8-201ENST00000040584 CHEK1O14757 476 aa16.74■□□□□ 0.27
HOXC8-201ENST00000040584 PSG9Q00887 426 aa16.74■□□□□ 0.27
HOXC8-201ENST00000040584 SSBP4Q9BWG4 385 aaPredicted RBP16.74■□□□□ 0.27
HOXC8-201ENST00000040584 AAMDCQ9H7C9 122 aa16.74■□□□□ 0.27
HOXC8-201ENST00000040584 RPL7P18124 248 aaKnown RBP16.73■□□□□ 0.27
HOXC8-201ENST00000040584 BTF3P20290 206 aaKnown RBP16.73■□□□□ 0.27
HOXC8-201ENST00000040584 SPATA45Q537H7 98 aa16.73■□□□□ 0.27
HOXC8-201ENST00000040584 DAZ1Q9NQZ3 744 aaKnown RBP16.73■□□□□ 0.27
HOXC8-201ENST00000040584 UQCR10Q9UDW1 63 aa16.73■□□□□ 0.27
HOXC8-201ENST00000040584 PSG8Q9UQ74 426 aa16.73■□□□□ 0.27
HOXC8-201ENST00000040584 EDN2P20800 178 aa16.73■□□□□ 0.27
HOXC8-201ENST00000040584 RIGQ13278 110 aa16.73■□□□□ 0.27
HOXC8-201ENST00000040584 RNASEKQ6P5S7 137 aaKnown RBP16.73■□□□□ 0.27
HOXC8-201ENST00000040584 RAX2Q96IS3 184 aa16.73■□□□□ 0.27
HOXC8-201ENST00000040584 TCAPO15273 167 aa16.72■□□□□ 0.27
HOXC8-201ENST00000040584 CSN1S1P47710 185 aa16.72■□□□□ 0.27
HOXC8-201ENST00000040584 UFC1Q9Y3C8 167 aa16.72■□□□□ 0.27
HOXC8-201ENST00000040584 GATD1Q8NB37 220 aa16.71■□□□□ 0.27
HOXC8-201ENST00000040584 TRAV8-1A0A0A6YYK1 113 aa16.71■□□□□ 0.27
HOXC8-201ENST00000040584 A0A1B0GUT8 65 aa16.71■□□□□ 0.27
HOXC8-201ENST00000040584 ADARB2-AS1A8MUL3 147 aa16.71■□□□□ 0.27
HOXC8-201ENST00000040584 K7EMT4 169 aa16.71■□□□□ 0.27
HOXC8-201ENST00000040584 OR5AL1P0C617 328 aa16.71■□□□□ 0.27
HOXC8-201ENST00000040584 NSUN5P1Q3KNT7 163 aa16.71■□□□□ 0.27
HOXC8-201ENST00000040584 PRIMA1Q86XR5 153 aa16.71■□□□□ 0.27
HOXC8-201ENST00000040584 C17orf77Q96MU5 243 aa16.71■□□□□ 0.27
HOXC8-201ENST00000040584 LOC102724200A0A096LPH7 203 aaPredicted RBP16.7■□□□□ 0.26
HOXC8-201ENST00000040584 IGHV7-4-1A0A0J9YVY3 117 aa16.7■□□□□ 0.26
HOXC8-201ENST00000040584 LGALS9O00182 355 aa16.7■□□□□ 0.26
HOXC8-201ENST00000040584 SMAD5-AS1Q9Y6J3 95 aa16.7■□□□□ 0.26
HOXC8-201ENST00000040584 TMEM213A2RRL7 107 aa16.69■□□□□ 0.26
HOXC8-201ENST00000040584 CCL24O00175 119 aa16.69■□□□□ 0.26
HOXC8-201ENST00000040584 CT45A10P0DMU9 189 aa16.69■□□□□ 0.26
HOXC8-201ENST00000040584 KRTAP24-1Q3LI83 254 aa16.69■□□□□ 0.26
HOXC8-201ENST00000040584 ZC2HC1AQ96GY0 325 aa16.69■□□□□ 0.26
HOXC8-201ENST00000040584 RHPN1-AS1Q9BWJ2 59 aa16.69■□□□□ 0.26
HOXC8-201ENST00000040584 SMPXQ9UHP9 88 aa16.69■□□□□ 0.26
HOXC8-201ENST00000040584 SELENOKQ9Y6D0 94 aa16.69■□□□□ 0.26
HOXC8-201ENST00000040584 LINC00614P0C842 121 aa16.68■□□□□ 0.26
HOXC8-201ENST00000040584 GLMPQ8WWB7 406 aa16.68■□□□□ 0.26
HOXC8-201ENST00000040584 DLX4Q92988 240 aaPredicted RBP16.68■□□□□ 0.26
HOXC8-201ENST00000040584 ATRQ13535 2644 aa16.68■□□□□ 0.26
HOXC8-201ENST00000040584 IGLC3P0DOY3 106 aa16.67■□□□□ 0.26
HOXC8-201ENST00000040584 FHL3Q13643 280 aa16.67■□□□□ 0.26
HOXC8-201ENST00000040584 SAPCD1Q5SSQ6 148 aa16.67■□□□□ 0.26
HOXC8-201ENST00000040584 COX8CQ7Z4L0 72 aa16.67■□□□□ 0.26
HOXC8-201ENST00000040584 TMEM70Q9BUB7 260 aa16.67■□□□□ 0.26
HOXC8-201ENST00000040584 TRAV9-2A0A087WT02 112 aa16.67■□□□□ 0.26
HOXC8-201ENST00000040584 C2orf70A6NJV1 201 aa16.67■□□□□ 0.26
HOXC8-201ENST00000040584 CRXO43186 299 aaPredicted RBP16.67■□□□□ 0.26
HOXC8-201ENST00000040584 NDUFA11Q86Y39 141 aa16.66■□□□□ 0.26
HOXC8-201ENST00000040584 A0A087X0K7 114 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms