RNA–Protein interactions for RNA: ENST00000006275.8

TRAPPC6A-201, Transcript of trafficking protein particle complex 6A, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC6A, Length 805 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6A-201ENST00000006275 C16orf90A8MZG2 172 aa13.38□□□□□ -0.27
TRAPPC6A-201ENST00000006275 NMBP08949 121 aa13.38□□□□□ -0.27
TRAPPC6A-201ENST00000006275 RNASE4P34096 147 aaKnown RBP13.38□□□□□ -0.27
TRAPPC6A-201ENST00000006275 CD300CQ08708 224 aa13.38□□□□□ -0.27
TRAPPC6A-201ENST00000006275 Q6ZNX1 250 aa13.38□□□□□ -0.27
TRAPPC6A-201ENST00000006275 SSX7Q7RTT5 188 aa13.38□□□□□ -0.27
TRAPPC6A-201ENST00000006275 IQCF2Q8IXL9 164 aa13.38□□□□□ -0.27
TRAPPC6A-201ENST00000006275 Q8TAT8 98 aa13.38□□□□□ -0.27
TRAPPC6A-201ENST00000006275 RNASE8Q8TDE3 154 aaKnown RBP13.38□□□□□ -0.27
TRAPPC6A-201ENST00000006275 PYGO2Q9BRQ0 406 aa13.38□□□□□ -0.27
TRAPPC6A-201ENST00000006275 TMEM167BQ9NRX6 74 aa13.38□□□□□ -0.27
TRAPPC6A-201ENST00000006275 HSPG2P98160 4391 aa13.37□□□□□ -0.27
TRAPPC6A-201ENST00000006275 TRBV7-9A0A0J9YWB2 115 aa13.37□□□□□ -0.27
TRAPPC6A-201ENST00000006275 KANTRA0A1W2PQU2 76 aa13.37□□□□□ -0.27
TRAPPC6A-201ENST00000006275 CDK2AP2O75956 126 aa13.37□□□□□ -0.27
TRAPPC6A-201ENST00000006275 C1orf134Q5TEV5 83 aa13.37□□□□□ -0.27
TRAPPC6A-201ENST00000006275 ZFAND2AQ8N6M9 145 aa13.37□□□□□ -0.27
TRAPPC6A-201ENST00000006275 SUN5Q8TC36 379 aa13.37□□□□□ -0.27
TRAPPC6A-201ENST00000006275 ST6GAL2Q96JF0 529 aa13.37□□□□□ -0.27
TRAPPC6A-201ENST00000006275 TIMM8BQ9Y5J9 83 aaPredicted RBP13.37□□□□□ -0.27
TRAPPC6A-201ENST00000006275 ZNF324O75467 553 aaPredicted RBP13.36□□□□□ -0.27
TRAPPC6A-201ENST00000006275 HTN3P15516 51 aa13.36□□□□□ -0.27
TRAPPC6A-201ENST00000006275 ZNF726P1Q15940 193 aa13.36□□□□□ -0.27
TRAPPC6A-201ENST00000006275 PRR9Q5T870 116 aa13.36□□□□□ -0.27
TRAPPC6A-201ENST00000006275 GOLT1AQ6ZVE7 132 aa13.36□□□□□ -0.27
TRAPPC6A-201ENST00000006275 ARL6IP6Q8N6S5 226 aa13.36□□□□□ -0.27
TRAPPC6A-201ENST00000006275 ZNF471Q9BX82 626 aaPredicted RBP13.36□□□□□ -0.27
TRAPPC6A-201ENST00000006275 BCL2L11O43521 198 aa13.35□□□□□ -0.27
TRAPPC6A-201ENST00000006275 DEFB130BP0DP73 79 aa13.35□□□□□ -0.27
TRAPPC6A-201ENST00000006275 DEFB130AP0DP74 79 aa13.35□□□□□ -0.27
TRAPPC6A-201ENST00000006275 GNG5P63218 68 aa13.35□□□□□ -0.27
TRAPPC6A-201ENST00000006275 NOP10Q9NPE3 64 aaKnown RBP13.35□□□□□ -0.27
TRAPPC6A-201ENST00000006275 SUMO1P63165 101 aaKnown RBP13.34□□□□□ -0.27
TRAPPC6A-201ENST00000006275 TMED6Q8WW62 240 aa13.34□□□□□ -0.27
TRAPPC6A-201ENST00000006275 LENEPQ9Y5L5 61 aa13.34□□□□□ -0.27
TRAPPC6A-201ENST00000006275 SNURFLB1AK76 121 aa13.33□□□□□ -0.28
TRAPPC6A-201ENST00000006275 PFDN1O60925 122 aa13.33□□□□□ -0.28
TRAPPC6A-201ENST00000006275 TMUB2Q71RG4 321 aa13.33□□□□□ -0.28
TRAPPC6A-201ENST00000006275 TCTE3Q8IZS6 198 aa13.33□□□□□ -0.28
TRAPPC6A-201ENST00000006275 EIF4E3Q8N5X7 224 aaKnown RBP13.33□□□□□ -0.28
TRAPPC6A-201ENST00000006275 C5orf17Q8NAS9 161 aa13.33□□□□□ -0.28
TRAPPC6A-201ENST00000006275 LINC00467Q9BRT7 94 aa13.33□□□□□ -0.28
TRAPPC6A-201ENST00000006275 SERTM2A0A1B0GWG4 89 aa13.32□□□□□ -0.28
TRAPPC6A-201ENST00000006275 CBY3A6NI87 242 aa13.32□□□□□ -0.28
TRAPPC6A-201ENST00000006275 RGS13O14921 159 aa13.32□□□□□ -0.28
TRAPPC6A-201ENST00000006275 SEC11BP0C7V7 166 aa13.32□□□□□ -0.28
TRAPPC6A-201ENST00000006275 FGF8P55075 233 aaPredicted RBP13.32□□□□□ -0.28
TRAPPC6A-201ENST00000006275 EIF5AP63241 154 aaKnown RBP13.32□□□□□ -0.28
TRAPPC6A-201ENST00000006275 FAM210BQ96KR6 192 aa13.32□□□□□ -0.28
TRAPPC6A-201ENST00000006275 TMPRSS5Q9H3S3 457 aa13.32□□□□□ -0.28
TRAPPC6A-201ENST00000006275 hCG_2014768A0A024R1R8 64 aa13.31□□□□□ -0.28
TRAPPC6A-201ENST00000006275 TRAV8-1A0A0A6YYK1 113 aa13.31□□□□□ -0.28
TRAPPC6A-201ENST00000006275 A0A1W2PRE2 83 aa13.31□□□□□ -0.28
TRAPPC6A-201ENST00000006275 MAP1LC3B2A6NCE7 125 aa13.31□□□□□ -0.28
TRAPPC6A-201ENST00000006275 TCRAP04437 139 aa13.31□□□□□ -0.28
TRAPPC6A-201ENST00000006275 ANXA2RQ3ZCQ2 193 aa13.31□□□□□ -0.28
TRAPPC6A-201ENST00000006275 RNF212Q495C1 297 aa13.31□□□□□ -0.28
TRAPPC6A-201ENST00000006275 Q6ZQT7 251 aa13.31□□□□□ -0.28
TRAPPC6A-201ENST00000006275 ZNF680Q8NEM1 530 aa13.31□□□□□ -0.28
TRAPPC6A-201ENST00000006275 MAP1LC3BQ9GZQ8 125 aa13.31□□□□□ -0.28
TRAPPC6A-201ENST00000006275 IGHV1OR15-1A0A075B7D0 117 aa13.3□□□□□ -0.28
TRAPPC6A-201ENST00000006275 GGTLC3B5MD39 225 aa13.3□□□□□ -0.28
TRAPPC6A-201ENST00000006275 K7EQM0 130 aa13.3□□□□□ -0.28
TRAPPC6A-201ENST00000006275 UBE2G2P60604 165 aa13.3□□□□□ -0.28
TRAPPC6A-201ENST00000006275 Q8N1X5 172 aa13.3□□□□□ -0.28
TRAPPC6A-201ENST00000006275 GSN-AS1Q9NRJ2 163 aa13.3□□□□□ -0.28
TRAPPC6A-201ENST00000006275 EPDR1Q9UM22 224 aa13.3□□□□□ -0.28
TRAPPC6A-201ENST00000006275 UMAD1C9J7I0 102 aa13.29□□□□□ -0.28
TRAPPC6A-201ENST00000006275 ATP5G1P05496 136 aa13.29□□□□□ -0.28
TRAPPC6A-201ENST00000006275 TPT1P13693 172 aaKnown RBP13.29□□□□□ -0.28
TRAPPC6A-201ENST00000006275 ATP5G3P48201 142 aa13.29□□□□□ -0.28
TRAPPC6A-201ENST00000006275 FHITP49789 147 aa13.29□□□□□ -0.28
TRAPPC6A-201ENST00000006275 TNP2Q05952 138 aa13.29□□□□□ -0.28
TRAPPC6A-201ENST00000006275 Q6AWC8 147 aa13.29□□□□□ -0.28
TRAPPC6A-201ENST00000006275 STOML3Q8TAV4 291 aa13.29□□□□□ -0.28
TRAPPC6A-201ENST00000006275 SGK494Q96LW2 274 aa13.29□□□□□ -0.28
TRAPPC6A-201ENST00000006275 C11orf72Q8NBR9 251 aa13.28□□□□□ -0.28
TRAPPC6A-201ENST00000006275 FAM213BQ8TBF2 198 aa13.28□□□□□ -0.28
TRAPPC6A-201ENST00000006275 NDFIP1Q9BT67 221 aa13.28□□□□□ -0.28
TRAPPC6A-201ENST00000006275 TREM1Q9NP99 234 aa13.28□□□□□ -0.28
TRAPPC6A-201ENST00000006275 TP53TG3Q9ULZ0 132 aa13.28□□□□□ -0.28
TRAPPC6A-201ENST00000006275 GAGE12BA1L429 117 aa13.27□□□□□ -0.29
TRAPPC6A-201ENST00000006275 F5H768 121 aa13.27□□□□□ -0.29
TRAPPC6A-201ENST00000006275 F6UZH7 168 aa13.27□□□□□ -0.29
TRAPPC6A-201ENST00000006275 GAGE7O76087 117 aa13.27□□□□□ -0.29
TRAPPC6A-201ENST00000006275 C1QBP02746 253 aa13.27□□□□□ -0.29
TRAPPC6A-201ENST00000006275 GAGE12FP0CL80 117 aa13.27□□□□□ -0.29
TRAPPC6A-201ENST00000006275 GAGE12GP0CL81 117 aa13.27□□□□□ -0.29
TRAPPC6A-201ENST00000006275 GAGE12IP0CL82 117 aa13.27□□□□□ -0.29
TRAPPC6A-201ENST00000006275 DAZ2Q13117 558 aaKnown RBP13.27□□□□□ -0.29
TRAPPC6A-201ENST00000006275 LGALSLQ3ZCW2 172 aaPredicted RBP13.27□□□□□ -0.29
TRAPPC6A-201ENST00000006275 MUC21Q5SSG8 566 aa13.27□□□□□ -0.29
TRAPPC6A-201ENST00000006275 IBA57Q5T440 356 aaKnown RBP13.27□□□□□ -0.29
TRAPPC6A-201ENST00000006275 AKAP14Q86UN6 197 aa13.27□□□□□ -0.29
TRAPPC6A-201ENST00000006275 CYB561D1Q8N8Q1 229 aa13.27□□□□□ -0.29
TRAPPC6A-201ENST00000006275 TVP23CQ96ET8 276 aa13.27□□□□□ -0.29
TRAPPC6A-201ENST00000006275 ATG101Q9BSB4 218 aa13.27□□□□□ -0.29
TRAPPC6A-201ENST00000006275 SCRT2Q9NQ03 307 aa13.27□□□□□ -0.29
TRAPPC6A-201ENST00000006275 DMBT1Q9UGM3 2413 aaPredicted RBP13.27□□□□□ -0.29
TRAPPC6A-201ENST00000006275 FAM74A7A6NL05 159 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 129.1 ms