RNA–Protein interactions for RNA: ENST00000638029.1

CACNA1A-258, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,814 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-258ENST00000638029 PINLYPA6NC86 204 aa13.29□□□□□ -0.28
CACNA1A-258ENST00000638029 IGKV1-13P0DP09 117 aa13.29□□□□□ -0.28
CACNA1A-258ENST00000638029 LIME1Q9H400 295 aa13.29□□□□□ -0.28
CACNA1A-258ENST00000638029 NOP10Q9NPE3 64 aaKnown RBP13.29□□□□□ -0.28
CACNA1A-258ENST00000638029 PRRC2AP48634 2157 aaKnown RBP13.29□□□□□ -0.28
CACNA1A-258ENST00000638029 WBP1Q96G27 269 aa13.29□□□□□ -0.28
CACNA1A-258ENST00000638029 NDUFC2O95298 119 aa13.28□□□□□ -0.28
CACNA1A-258ENST00000638029 IGHV1-8P0DP01 117 aa13.28□□□□□ -0.28
CACNA1A-258ENST00000638029 IGHV3-30P01768 117 aa13.28□□□□□ -0.28
CACNA1A-258ENST00000638029 IGHV3-33P01772 117 aa13.28□□□□□ -0.28
CACNA1A-258ENST00000638029 IGHV3-30-3P0DP02 117 aa13.28□□□□□ -0.28
CACNA1A-258ENST00000638029 IGHV3-30-5P0DP03 117 aa13.28□□□□□ -0.28
CACNA1A-258ENST00000638029 LMO1P25800 156 aa13.28□□□□□ -0.28
CACNA1A-258ENST00000638029 IGLV10-54A0A075B6I4 117 aa13.28□□□□□ -0.28
CACNA1A-258ENST00000638029 TMEM178BH3BS89 294 aa13.28□□□□□ -0.28
CACNA1A-258ENST00000638029 TMEM242Q9NWH2 141 aa13.28□□□□□ -0.28
CACNA1A-258ENST00000638029 PLXNA3P51805 1871 aa13.28□□□□□ -0.28
CACNA1A-258ENST00000638029 SEM1Q6ZVN7 128 aa13.28□□□□□ -0.28
CACNA1A-258ENST00000638029 C15orf53Q8NAA6 179 aa13.28□□□□□ -0.28
CACNA1A-258ENST00000638029 USMG5Q96IX5 58 aa13.28□□□□□ -0.28
CACNA1A-258ENST00000638029 EML5Q05BV3 1969 aa13.27□□□□□ -0.28
CACNA1A-258ENST00000638029 TEX22C9J3V5 150 aa13.27□□□□□ -0.28
CACNA1A-258ENST00000638029 TRBV6-7A0A0A0MS04 114 aa13.27□□□□□ -0.28
CACNA1A-258ENST00000638029 TP53TG1Q9Y2A0 90 aa13.27□□□□□ -0.28
CACNA1A-258ENST00000638029 LYPD2Q6UXB3 125 aa13.27□□□□□ -0.28
CACNA1A-258ENST00000638029 GTSF1Q8WW33 167 aa13.27□□□□□ -0.28
CACNA1A-258ENST00000638029 FANCD2OSQ96PS1 177 aa13.27□□□□□ -0.28
CACNA1A-258ENST00000638029 SHISA9B4DS77 424 aa13.27□□□□□ -0.29
CACNA1A-258ENST00000638029 B5MCH6 92 aa13.27□□□□□ -0.29
CACNA1A-258ENST00000638029 BUB1B-PAK6H3BSN5 160 aa13.27□□□□□ -0.29
CACNA1A-258ENST00000638029 LINC00205P59089 165 aa13.27□□□□□ -0.29
CACNA1A-258ENST00000638029 OSTCQ9NRP0 149 aa13.27□□□□□ -0.29
CACNA1A-258ENST00000638029 TMEM243Q9BU79 118 aa13.26□□□□□ -0.29
CACNA1A-258ENST00000638029 EXPH5Q8NEV8 1989 aa13.26□□□□□ -0.29
CACNA1A-258ENST00000638029 CREBBPQ92793 2442 aa13.26□□□□□ -0.29
CACNA1A-258ENST00000638029 FAM223BA6NKX1 122 aa13.26□□□□□ -0.29
CACNA1A-258ENST00000638029 SYS1-DBNDD2H3BUS1 97 aa13.26□□□□□ -0.29
CACNA1A-258ENST00000638029 FAM223AQ8IWN6 122 aa13.26□□□□□ -0.29
CACNA1A-258ENST00000638029 TSKUQ8WUA8 353 aa13.26□□□□□ -0.29
CACNA1A-258ENST00000638029 COL4A1P02462 1669 aa13.26□□□□□ -0.29
CACNA1A-258ENST00000638029 NUP35Q8NFH5 326 aa13.26□□□□□ -0.29
CACNA1A-258ENST00000638029 ZNF664Q8N3J9 261 aa13.26□□□□□ -0.29
CACNA1A-258ENST00000638029 LY6G5BQ8NDX9 201 aa13.26□□□□□ -0.29
CACNA1A-258ENST00000638029 RNF126Q9BV68 326 aa13.25□□□□□ -0.29
CACNA1A-258ENST00000638029 COL4A5P29400 1685 aa13.25□□□□□ -0.29
CACNA1A-258ENST00000638029 NPSP0C0P6 89 aa13.25□□□□□ -0.29
CACNA1A-258ENST00000638029 DEFB136Q30KP8 78 aa13.25□□□□□ -0.29
CACNA1A-258ENST00000638029 RIF1Q5UIP0 2472 aaKnown RBP13.25□□□□□ -0.29
CACNA1A-258ENST00000638029 TRAV3A0A0B4J244 114 aa13.25□□□□□ -0.29
CACNA1A-258ENST00000638029 ASPHD1Q5U4P2 390 aa13.25□□□□□ -0.29
CACNA1A-258ENST00000638029 DAZ1Q9NQZ3 744 aaKnown RBP13.24□□□□□ -0.29
CACNA1A-258ENST00000638029 PLXNA2O75051 1894 aa13.24□□□□□ -0.29
CACNA1A-258ENST00000638029 LINC00271P0C7V0 271 aa13.24□□□□□ -0.29
CACNA1A-258ENST00000638029 IGHG2P01859 326 aa13.24□□□□□ -0.29
CACNA1A-258ENST00000638029 CCL18P55774 89 aa13.24□□□□□ -0.29
CACNA1A-258ENST00000638029 TM2D2Q9BX73 214 aa13.24□□□□□ -0.29
CACNA1A-258ENST00000638029 ACYP1P07311 99 aa13.24□□□□□ -0.29
CACNA1A-258ENST00000638029 BRK1Q8WUW1 75 aa13.24□□□□□ -0.29
CACNA1A-258ENST00000638029 OTOGLQ3ZCN5 2332 aa13.24□□□□□ -0.29
CACNA1A-258ENST00000638029 LYZL4Q96KX0 146 aa13.23□□□□□ -0.29
CACNA1A-258ENST00000638029 ZNRD1Q9P1U0 126 aa13.23□□□□□ -0.29
CACNA1A-258ENST00000638029 A8MWP6 167 aa13.23□□□□□ -0.29
CACNA1A-258ENST00000638029 FGF6P10767 208 aa13.23□□□□□ -0.29
CACNA1A-258ENST00000638029 SMPXQ9UHP9 88 aa13.23□□□□□ -0.29
CACNA1A-258ENST00000638029 RHODO00212 210 aa13.23□□□□□ -0.29
CACNA1A-258ENST00000638029 HLA-DRB4P13762 266 aa13.23□□□□□ -0.29
CACNA1A-258ENST00000638029 CRYBA4P53673 196 aa13.23□□□□□ -0.29
CACNA1A-258ENST00000638029 GPHB5Q86YW7 130 aa13.23□□□□□ -0.29
CACNA1A-258ENST00000638029 RPRMLQ8N4K4 120 aa13.23□□□□□ -0.29
CACNA1A-258ENST00000638029 ANKRD29Q8N6D5 301 aa13.23□□□□□ -0.29
CACNA1A-258ENST00000638029 HLA-DRB4X5D2U9 266 aa13.23□□□□□ -0.29
CACNA1A-258ENST00000638029 RNF222A6NCQ9 220 aa13.22□□□□□ -0.29
CACNA1A-258ENST00000638029 CSRP1P21291 193 aaKnown RBP13.22□□□□□ -0.29
CACNA1A-258ENST00000638029 MINOS1Q5TGZ0 78 aa13.22□□□□□ -0.29
CACNA1A-258ENST00000638029 MINOS1-NBL1R4GNA1 71 aa13.22□□□□□ -0.29
CACNA1A-258ENST00000638029 ETDCA0A1B0GVM5 59 aa13.22□□□□□ -0.29
CACNA1A-258ENST00000638029 ATG2AQ2TAZ0 1938 aa13.22□□□□□ -0.29
CACNA1A-258ENST00000638029 SPANXA1Q9NS26 97 aa13.22□□□□□ -0.29
CACNA1A-258ENST00000638029 C3orf79P0CE67 100 aa13.22□□□□□ -0.29
CACNA1A-258ENST00000638029 C9orf47Q6ZRZ4 202 aa13.22□□□□□ -0.29
CACNA1A-258ENST00000638029 MPLKIPQ8TAP9 179 aa13.22□□□□□ -0.29
CACNA1A-258ENST00000638029 SIP14410 1827 aa13.22□□□□□ -0.29
CACNA1A-258ENST00000638029 C5orf64Q2M2E5 130 aa13.22□□□□□ -0.29
CACNA1A-258ENST00000638029 C5orf24Q7Z6I8 188 aa13.22□□□□□ -0.29
CACNA1A-258ENST00000638029 TRPT1Q86TN4 253 aaKnown RBP13.22□□□□□ -0.29
CACNA1A-258ENST00000638029 RPP25LQ8N5L8 163 aaKnown RBP13.22□□□□□ -0.29
CACNA1A-258ENST00000638029 RFNGQ9Y644 331 aa13.22□□□□□ -0.29
CACNA1A-258ENST00000638029 A0A1B0GUS0 222 aa13.22□□□□□ -0.29
CACNA1A-258ENST00000638029 IGLV3-19P01714 112 aa13.22□□□□□ -0.29
CACNA1A-258ENST00000638029 SPG11Q96JI7 2443 aa13.21□□□□□ -0.29
CACNA1A-258ENST00000638029 IGLL5B9A064 214 aa13.21□□□□□ -0.29
CACNA1A-258ENST00000638029 GLRX5Q86SX6 157 aa13.21□□□□□ -0.29
CACNA1A-258ENST00000638029 IGFBP3P17936 291 aaPredicted RBP13.21□□□□□ -0.29
CACNA1A-258ENST00000638029 PLXNA4Q9HCM2 1894 aa13.21□□□□□ -0.29
CACNA1A-258ENST00000638029 H0Y9J4 135 aa13.21□□□□□ -0.29
CACNA1A-258ENST00000638029 GAGE12HA6NDE8 117 aa13.21□□□□□ -0.29
CACNA1A-258ENST00000638029 SPTSSBQ8NFR3 76 aa13.21□□□□□ -0.3
CACNA1A-258ENST00000638029 WFDC1Q9HC57 220 aa13.21□□□□□ -0.3
CACNA1A-258ENST00000638029 ARMS2P0C7Q2 107 aa13.2□□□□□ -0.3
CACNA1A-258ENST00000638029 IGKV4-1P06312 121 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms