RNA–Protein interactions for RNA: ENST00000637494.1

CLN6-221, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5 BASIC

Gene CLN6, Length 765 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-221ENST00000637494 CCL18P55774 89 aa13.33□□□□□ -0.28
CLN6-221ENST00000637494 FAM122CQ6P4D5 195 aa13.33□□□□□ -0.28
CLN6-221ENST00000637494 ZNF680Q8NEM1 530 aa13.33□□□□□ -0.28
CLN6-221ENST00000637494 GAGE12BA1L429 117 aa13.32□□□□□ -0.28
CLN6-221ENST00000637494 GAGE7O76087 117 aa13.32□□□□□ -0.28
CLN6-221ENST00000637494 GAGE12FP0CL80 117 aa13.32□□□□□ -0.28
CLN6-221ENST00000637494 GAGE12GP0CL81 117 aa13.32□□□□□ -0.28
CLN6-221ENST00000637494 GAGE12IP0CL82 117 aa13.32□□□□□ -0.28
CLN6-221ENST00000637494 RPL12P30050 165 aaKnown RBP13.32□□□□□ -0.28
CLN6-221ENST00000637494 CSN1S1P47710 185 aa13.32□□□□□ -0.28
CLN6-221ENST00000637494 OR5I1Q13606 314 aa13.32□□□□□ -0.28
CLN6-221ENST00000637494 RNF141Q8WVD5 230 aa13.32□□□□□ -0.28
CLN6-221ENST00000637494 FAM167A-AS1Q96KT0 104 aa13.32□□□□□ -0.28
CLN6-221ENST00000637494 AGPAT4-IT1Q9H0P7 198 aa13.32□□□□□ -0.28
CLN6-221ENST00000637494 NMBP08949 121 aa13.31□□□□□ -0.28
CLN6-221ENST00000637494 OR10J4P0C629 311 aa13.31□□□□□ -0.28
CLN6-221ENST00000637494 RNASE4P34096 147 aaKnown RBP13.31□□□□□ -0.28
CLN6-221ENST00000637494 TAS2R45P59539 299 aa13.31□□□□□ -0.28
CLN6-221ENST00000637494 FFAR4Q5NUL3 377 aa13.31□□□□□ -0.28
CLN6-221ENST00000637494 C9orf47Q6ZRZ4 202 aa13.31□□□□□ -0.28
CLN6-221ENST00000637494 GNPNAT1Q96EK6 184 aaPredicted RBP13.31□□□□□ -0.28
CLN6-221ENST00000637494 KLLNB2CW77 178 aa13.3□□□□□ -0.28
CLN6-221ENST00000637494 DAZ2Q13117 558 aaKnown RBP13.3□□□□□ -0.28
CLN6-221ENST00000637494 KHDC3LQ587J8 217 aa13.3□□□□□ -0.28
CLN6-221ENST00000637494 LYPD1Q8N2G4 141 aa13.3□□□□□ -0.28
CLN6-221ENST00000637494 EIF4E3Q8N5X7 224 aaKnown RBP13.3□□□□□ -0.28
CLN6-221ENST00000637494 SMIM3Q9BZL3 60 aa13.3□□□□□ -0.28
CLN6-221ENST00000637494 IGKV2-40A0A087WW87 121 aaPredicted RBP13.29□□□□□ -0.28
CLN6-221ENST00000637494 RGS13O14921 159 aa13.29□□□□□ -0.28
CLN6-221ENST00000637494 RTL8CO15255 209 aa13.29□□□□□ -0.28
CLN6-221ENST00000637494 IGKV2D-40P01614 121 aaPredicted RBP13.29□□□□□ -0.28
CLN6-221ENST00000637494 M6PRP20645 277 aa13.29□□□□□ -0.28
CLN6-221ENST00000637494 UBE2L3P68036 154 aaKnown RBP13.29□□□□□ -0.28
CLN6-221ENST00000637494 BTN1A1Q13410 526 aa13.29□□□□□ -0.28
CLN6-221ENST00000637494 C1orf134Q5TEV5 83 aa13.29□□□□□ -0.28
CLN6-221ENST00000637494 Q6ZR54 194 aa13.29□□□□□ -0.28
CLN6-221ENST00000637494 LINC00612Q8N6U2 182 aa13.29□□□□□ -0.28
CLN6-221ENST00000637494 FXYD5Q96DB9 178 aa13.29□□□□□ -0.28
CLN6-221ENST00000637494 LINC00467Q9BRT7 94 aa13.29□□□□□ -0.28
CLN6-221ENST00000637494 MBD2Q9UBB5 411 aa13.29□□□□□ -0.28
CLN6-221ENST00000637494 FRAS1Q86XX4 4008 aa13.29□□□□□ -0.28
CLN6-221ENST00000637494 TRGV2A0A075B6R0 118 aa13.28□□□□□ -0.28
CLN6-221ENST00000637494 CRISP2P16562 243 aa13.28□□□□□ -0.28
CLN6-221ENST00000637494 ZNF138P52744 262 aa13.28□□□□□ -0.28
CLN6-221ENST00000637494 FAM19A4Q96LR4 140 aa13.28□□□□□ -0.28
CLN6-221ENST00000637494 ZNF492Q9P255 531 aa13.28□□□□□ -0.28
CLN6-221ENST00000637494 TRAV26-1A0A087WT03 109 aa13.27□□□□□ -0.29
CLN6-221ENST00000637494 ZNF324O75467 553 aaPredicted RBP13.27□□□□□ -0.29
CLN6-221ENST00000637494 RANP62826 216 aaKnown RBP13.27□□□□□ -0.29
CLN6-221ENST00000637494 CD300CQ08708 224 aa13.27□□□□□ -0.29
CLN6-221ENST00000637494 ANXA2RQ3ZCQ2 193 aa13.27□□□□□ -0.29
CLN6-221ENST00000637494 PHYHIPLQ96FC7 376 aa13.27□□□□□ -0.29
CLN6-221ENST00000637494 VGLL1Q99990 258 aa13.27□□□□□ -0.29
CLN6-221ENST00000637494 TRBV7-9A0A0J9YWB2 115 aa13.26□□□□□ -0.29
CLN6-221ENST00000637494 ACOT6Q3I5F7 207 aaPredicted RBP13.26□□□□□ -0.29
CLN6-221ENST00000637494 FAM74A1Q5RGS3 127 aa13.26□□□□□ -0.29
CLN6-221ENST00000637494 RXFP4Q8TDU9 374 aa13.26□□□□□ -0.29
CLN6-221ENST00000637494 ZNF503Q96F45 646 aa13.26□□□□□ -0.29
CLN6-221ENST00000637494 ARPC5LQ9BPX5 153 aa13.26□□□□□ -0.29
CLN6-221ENST00000637494 Q9H3A6 140 aa13.26□□□□□ -0.29
CLN6-221ENST00000637494 GSN-AS1Q9NRJ2 163 aa13.26□□□□□ -0.29
CLN6-221ENST00000637494 TRGV1A0A0A0MS02 117 aa13.25□□□□□ -0.29
CLN6-221ENST00000637494 A0A0J9YY99 117 aa13.25□□□□□ -0.29
CLN6-221ENST00000637494 A0A1W2PPV4 95 aa13.25□□□□□ -0.29
CLN6-221ENST00000637494 RBAKDNA6NC62 111 aa13.25□□□□□ -0.29
CLN6-221ENST00000637494 Q6ZTI0 123 aa13.25□□□□□ -0.29
CLN6-221ENST00000637494 DNAH10Q8IVF4 4471 aa13.25□□□□□ -0.29
CLN6-221ENST00000637494 DNAH6Q9C0G6 4158 aa13.25□□□□□ -0.29
CLN6-221ENST00000637494 IGHV1OR15-1A0A075B7D0 117 aa13.24□□□□□ -0.29
CLN6-221ENST00000637494 A0A1B0GVY2 172 aa13.24□□□□□ -0.29
CLN6-221ENST00000637494 H3BNG1 76 aa13.24□□□□□ -0.29
CLN6-221ENST00000637494 IBA57Q5T440 356 aaKnown RBP13.24□□□□□ -0.29
CLN6-221ENST00000637494 SSX7Q7RTT5 188 aa13.24□□□□□ -0.29
CLN6-221ENST00000637494 ZFAND2AQ8N6M9 145 aa13.24□□□□□ -0.29
CLN6-221ENST00000637494 ZNRF2Q8NHG8 242 aa13.24□□□□□ -0.29
CLN6-221ENST00000637494 CMTM2Q8TAZ6 248 aa13.24□□□□□ -0.29
CLN6-221ENST00000637494 TMPRSS5Q9H3S3 457 aa13.24□□□□□ -0.29
CLN6-221ENST00000637494 LINC00588Q9Y4M8 146 aa13.24□□□□□ -0.29
CLN6-221ENST00000637494 ALG5Q9Y673 324 aa13.24□□□□□ -0.29
CLN6-221ENST00000637494 NBDYA0A0U1RRE5 68 aa13.23□□□□□ -0.29
CLN6-221ENST00000637494 HOXA5P20719 270 aa13.23□□□□□ -0.29
CLN6-221ENST00000637494 TCL1AP56279 114 aa13.23□□□□□ -0.29
CLN6-221ENST00000637494 C11orf72Q8NBR9 251 aa13.23□□□□□ -0.29
CLN6-221ENST00000637494 NACAE9PAV3 2078 aa13.22□□□□□ -0.29
CLN6-221ENST00000637494 PTTG1O95997 202 aa13.22□□□□□ -0.29
CLN6-221ENST00000637494 ZNF415Q09FC8 603 aa13.22□□□□□ -0.29
CLN6-221ENST00000637494 PQLC2Q6ZP29 291 aa13.22□□□□□ -0.29
CLN6-221ENST00000637494 Q8TAT8 98 aa13.22□□□□□ -0.29
CLN6-221ENST00000637494 HYLS1Q96M11 299 aa13.22□□□□□ -0.29
CLN6-221ENST00000637494 C18orf15Q96N68 181 aa13.22□□□□□ -0.29
CLN6-221ENST00000637494 MED28Q9H204 178 aa13.22□□□□□ -0.29
CLN6-221ENST00000637494 LENEPQ9Y5L5 61 aa13.22□□□□□ -0.29
CLN6-221ENST00000637494 ZNF266Q14584 549 aa13.21□□□□□ -0.29
CLN6-221ENST00000637494 OTORQ9NRC9 128 aa13.21□□□□□ -0.29
CLN6-221ENST00000637494 KLF12Q9Y4X4 402 aa13.21□□□□□ -0.29
CLN6-221ENST00000637494 DIRC3C9JPN6 131 aa13.2□□□□□ -0.3
CLN6-221ENST00000637494 SPINK4O60575 86 aa13.2□□□□□ -0.3
CLN6-221ENST00000637494 PRR9Q5T870 116 aa13.2□□□□□ -0.3
CLN6-221ENST00000637494 C6orf223Q8N319 242 aa13.2□□□□□ -0.3
CLN6-221ENST00000637494 OR10G4Q8NGN3 311 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms