RNA–Protein interactions for RNA: ENST00000636843.1

CTSD-208, Transcript of cathepsin D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTSD, Length 1,512 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-208ENST00000636843 SMIM12Q96EX1 92 aa9.43□□□□□ -0.9
CTSD-208ENST00000636843 HIST1H2BNQ99877 126 aa9.43□□□□□ -0.9
CTSD-208ENST00000636843 HIST1H2BMQ99879 126 aa9.43□□□□□ -0.9
CTSD-208ENST00000636843 SHANK2-AS3Q9BTD1 123 aa9.43□□□□□ -0.9
CTSD-208ENST00000636843 WFDC10AQ9H1F0 79 aa9.43□□□□□ -0.9
CTSD-208ENST00000636843 IL36BQ9NZH7 164 aa9.43□□□□□ -0.9
CTSD-208ENST00000636843 EPDR1Q9UM22 224 aa9.43□□□□□ -0.9
CTSD-208ENST00000636843 PGPA6NDG6 321 aa9.42□□□□□ -0.9
CTSD-208ENST00000636843 ISLRO14498 428 aa9.42□□□□□ -0.9
CTSD-208ENST00000636843 NDUFB8O95169 186 aa9.42□□□□□ -0.9
CTSD-208ENST00000636843 IGLV2-8P01709 118 aa9.42□□□□□ -0.9
CTSD-208ENST00000636843 SLC25A5P05141 298 aaKnown RBP9.42□□□□□ -0.9
CTSD-208ENST00000636843 TRGC1P0CF51 173 aa9.42□□□□□ -0.9
CTSD-208ENST00000636843 HOXA5P20719 270 aa9.42□□□□□ -0.9
CTSD-208ENST00000636843 CBLN1P23435 193 aa9.42□□□□□ -0.9
CTSD-208ENST00000636843 S100A7P31151 101 aa9.42□□□□□ -0.9
CTSD-208ENST00000636843 ERVFC1-1P60608 527 aa9.42□□□□□ -0.9
CTSD-208ENST00000636843 RANP62826 216 aaKnown RBP9.42□□□□□ -0.9
CTSD-208ENST00000636843 ZNF600Q6ZNG1 722 aa9.42□□□□□ -0.9
CTSD-208ENST00000636843 BPIFA4PQ86YQ2 179 aa9.42□□□□□ -0.9
CTSD-208ENST00000636843 LINC00518Q8N0U6 118 aa9.42□□□□□ -0.9
CTSD-208ENST00000636843 C5orf17Q8NAS9 161 aa9.42□□□□□ -0.9
CTSD-208ENST00000636843 BLNKQ8WV28 456 aa9.42□□□□□ -0.9
CTSD-208ENST00000636843 FRZBQ92765 325 aa9.42□□□□□ -0.9
CTSD-208ENST00000636843 PLECQ15149 4684 aaKnown RBP9.42□□□□□ -0.9
CTSD-208ENST00000636843 IL4P05112 153 aa9.41□□□□□ -0.9
CTSD-208ENST00000636843 ARL3P36405 182 aa9.41□□□□□ -0.9
CTSD-208ENST00000636843 NDUFA6P56556 154 aa9.41□□□□□ -0.9
CTSD-208ENST00000636843 RPL19P84098 196 aaKnown RBP9.41□□□□□ -0.9
CTSD-208ENST00000636843 TMEM183BQ1AE95 376 aa9.41□□□□□ -0.9
CTSD-208ENST00000636843 CLEC19AQ6UXS0 136 aa9.41□□□□□ -0.9
CTSD-208ENST00000636843 EEF1AKMT3Q96AZ1 226 aa9.41□□□□□ -0.9
CTSD-208ENST00000636843 CCDC140Q96MF4 163 aa9.41□□□□□ -0.9
CTSD-208ENST00000636843 OTORQ9NRC9 128 aa9.41□□□□□ -0.9
CTSD-208ENST00000636843 ZNF320A2RRD8 509 aa9.41□□□□□ -0.9
CTSD-208ENST00000636843 A8MWP6 167 aa9.41□□□□□ -0.9
CTSD-208ENST00000636843 F8W735 103 aaPredicted RBP9.41□□□□□ -0.9
CTSD-208ENST00000636843 EDN2P20800 178 aa9.41□□□□□ -0.9
CTSD-208ENST00000636843 UBE2G1P62253 170 aa9.41□□□□□ -0.9
CTSD-208ENST00000636843 LYPD1Q8N2G4 141 aa9.41□□□□□ -0.9
CTSD-208ENST00000636843 ATG101Q9BSB4 218 aa9.41□□□□□ -0.9
CTSD-208ENST00000636843 Q9H3A6 140 aa9.41□□□□□ -0.9
CTSD-208ENST00000636843 KLF12Q9Y4X4 402 aa9.41□□□□□ -0.9
CTSD-208ENST00000636843 V9GYV3 84 aa9.41□□□□□ -0.9
CTSD-208ENST00000636843 TRBV7-1A0A0A6YYK4 115 aa9.4□□□□□ -0.91
CTSD-208ENST00000636843 TMEM213A2RRL7 107 aa9.4□□□□□ -0.91
CTSD-208ENST00000636843 IGHV3-23P01764 117 aa9.4□□□□□ -0.91
CTSD-208ENST00000636843 MGST1P10620 155 aaKnown RBP9.4□□□□□ -0.91
CTSD-208ENST00000636843 OR5I1Q13606 314 aa9.4□□□□□ -0.91
CTSD-208ENST00000636843 ACTL10Q5JWF8 245 aa9.4□□□□□ -0.91
CTSD-208ENST00000636843 IBA57Q5T440 356 aaKnown RBP9.4□□□□□ -0.91
CTSD-208ENST00000636843 LEMD1Q68G75 181 aa9.4□□□□□ -0.91
CTSD-208ENST00000636843 FAM231DQ6ZW35 169 aa9.4□□□□□ -0.91
CTSD-208ENST00000636843 BAGE2Q86Y30 109 aa9.4□□□□□ -0.91
CTSD-208ENST00000636843 TMEM61Q8N0U2 210 aa9.4□□□□□ -0.91
CTSD-208ENST00000636843 FMC1Q96HJ9 113 aa9.4□□□□□ -0.91
CTSD-208ENST00000636843 CHRDL1Q9BU40 450 aa9.4□□□□□ -0.91
CTSD-208ENST00000636843 ZNF586Q9NXT0 402 aa9.4□□□□□ -0.91
CTSD-208ENST00000636843 TRAV25A0A0B4J276 109 aa9.39□□□□□ -0.91
CTSD-208ENST00000636843 ZNF98A6NK75 572 aa9.39□□□□□ -0.91
CTSD-208ENST00000636843 ATP6V0BQ99437 205 aa9.39□□□□□ -0.91
CTSD-208ENST00000636843 S4R3C0 116 aa9.39□□□□□ -0.91
CTSD-208ENST00000636843 TRBV19A0A075B6N1 114 aa9.38□□□□□ -0.91
CTSD-208ENST00000636843 LOC102724200A0A096LPH7 203 aaPredicted RBP9.38□□□□□ -0.91
CTSD-208ENST00000636843 SLC17A3O00476 420 aa9.38□□□□□ -0.91
CTSD-208ENST00000636843 TCRAP04437 139 aa9.38□□□□□ -0.91
CTSD-208ENST00000636843 CLEC3BP05452 202 aa9.38□□□□□ -0.91
CTSD-208ENST00000636843 CTSGP08311 255 aa9.38□□□□□ -0.91
CTSD-208ENST00000636843 IGLC2P0DOY2 106 aa9.38□□□□□ -0.91
CTSD-208ENST00000636843 GNG5P63218 68 aa9.38□□□□□ -0.91
CTSD-208ENST00000636843 PDE6HQ13956 83 aa9.38□□□□□ -0.91
CTSD-208ENST00000636843 USF2Q15853 346 aaPredicted RBP9.38□□□□□ -0.91
CTSD-208ENST00000636843 COX19Q49B96 90 aa9.38□□□□□ -0.91
CTSD-208ENST00000636843 CMTM2Q8TAZ6 248 aa9.38□□□□□ -0.91
CTSD-208ENST00000636843 ZNF502Q8TBZ5 544 aa9.38□□□□□ -0.91
CTSD-208ENST00000636843 LINC00479Q96M42 142 aa9.38□□□□□ -0.91
CTSD-208ENST00000636843 GPR82Q96P67 336 aa9.38□□□□□ -0.91
CTSD-208ENST00000636843 OVOL2Q9BRP0 275 aa9.38□□□□□ -0.91
CTSD-208ENST00000636843 TRBV6-1A0A0K0K1D8 114 aa9.37□□□□□ -0.91
CTSD-208ENST00000636843 OR2T8A6NH00 312 aa9.37□□□□□ -0.91
CTSD-208ENST00000636843 MRPS12O15235 138 aaKnown RBP9.37□□□□□ -0.91
CTSD-208ENST00000636843 SMIM6P0DI80 62 aa9.37□□□□□ -0.91
CTSD-208ENST00000636843 MEOX2P50222 304 aa9.37□□□□□ -0.91
CTSD-208ENST00000636843 RNASE7Q9H1E1 156 aaKnown RBP9.37□□□□□ -0.91
CTSD-208ENST00000636843 RABAC1Q9UI14 185 aa9.37□□□□□ -0.91
CTSD-208ENST00000636843 TRAPPC1Q9Y5R8 145 aa9.37□□□□□ -0.91
CTSD-208ENST00000636843 SELENOKQ9Y6D0 94 aa9.37□□□□□ -0.91
CTSD-208ENST00000636843 TRAV34A0A0B4J273 112 aa9.36□□□□□ -0.91
CTSD-208ENST00000636843 ZNF705GA8MUZ8 300 aaPredicted RBP9.36□□□□□ -0.91
CTSD-208ENST00000636843 SNRPCP09234 159 aaKnown RBP9.36□□□□□ -0.91
CTSD-208ENST00000636843 TM4SF20Q53R12 229 aa9.36□□□□□ -0.91
CTSD-208ENST00000636843 RBPMS2Q6ZRY4 209 aaKnown RBP9.36□□□□□ -0.91
CTSD-208ENST00000636843 UFC1Q9Y3C8 167 aa9.36□□□□□ -0.91
CTSD-208ENST00000636843 SMIM27A0A1W2PRY6 76 aa9.36□□□□□ -0.91
CTSD-208ENST00000636843 K7EQM0 130 aa9.36□□□□□ -0.91
CTSD-208ENST00000636843 GATCO43716 136 aaKnown RBP9.36□□□□□ -0.91
CTSD-208ENST00000636843 LTAP01374 205 aa9.36□□□□□ -0.91
CTSD-208ENST00000636843 RPL7P18124 248 aaKnown RBP9.36□□□□□ -0.91
CTSD-208ENST00000636843 S100A2P29034 98 aa9.36□□□□□ -0.91
CTSD-208ENST00000636843 COA6Q5JTJ3 125 aaKnown RBP9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms