RNA–Protein interactions for RNA: ENST00000618902.1

SHMT1-211, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 5 BASIC

Gene SHMT1, Length 378 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-211ENST00000618902 MRPL18Q9H0U6 180 aaKnown RBP4□□□□□ -1.77
SHMT1-211ENST00000618902 FNDC4Q9H6D8 234 aaPredicted RBP4□□□□□ -1.77
SHMT1-211ENST00000618902 SEPSECSQ9HD40 501 aaKnown RBP4□□□□□ -1.77
SHMT1-211ENST00000618902 AURKAIP1Q9NWT8 199 aaPredicted RBP4□□□□□ -1.77
SHMT1-211ENST00000618902 PPP1R14DQ9NXH3 145 aa4□□□□□ -1.77
SHMT1-211ENST00000618902 ZNF586Q9NXT0 402 aa4□□□□□ -1.77
SHMT1-211ENST00000618902 NAT8BQ9UHF3 227 aa4□□□□□ -1.77
SHMT1-211ENST00000618902 FBXL7Q9UJT9 491 aa4□□□□□ -1.77
SHMT1-211ENST00000618902 KLF12Q9Y4X4 402 aa4□□□□□ -1.77
SHMT1-211ENST00000618902 V9GYV3 84 aa4□□□□□ -1.77
SHMT1-211ENST00000618902 TRAV30A0A087WSZ9 112 aa3.99□□□□□ -1.77
SHMT1-211ENST00000618902 KIR2DL5BA0A0G2JN68 375 aa3.99□□□□□ -1.77
SHMT1-211ENST00000618902 KIR2DL5BA0A0G2JPC4 375 aa3.99□□□□□ -1.77
SHMT1-211ENST00000618902 TRBV6-1A0A0K0K1D8 114 aa3.99□□□□□ -1.77
SHMT1-211ENST00000618902 A0A1B0GW15 77 aa3.99□□□□□ -1.77
SHMT1-211ENST00000618902 SERTM2A0A1B0GWG4 89 aa3.99□□□□□ -1.77
SHMT1-211ENST00000618902 SCO2A0A1W2PP80 73 aa3.99□□□□□ -1.77
SHMT1-211ENST00000618902 A8MWL6 223 aa3.99□□□□□ -1.77
SHMT1-211ENST00000618902 OR7C2O60412 319 aa3.99□□□□□ -1.77
SHMT1-211ENST00000618902 GPX1P07203 203 aa3.99□□□□□ -1.77
SHMT1-211ENST00000618902 OR5AL1P0C617 328 aa3.99□□□□□ -1.77
SHMT1-211ENST00000618902 DEFA4P12838 97 aa3.99□□□□□ -1.77
SHMT1-211ENST00000618902 HOXD3P31249 432 aaPredicted RBP3.99□□□□□ -1.77
SHMT1-211ENST00000618902 ADMP35318 185 aa3.99□□□□□ -1.77
SHMT1-211ENST00000618902 UBE2G2P60604 165 aa3.99□□□□□ -1.77
SHMT1-211ENST00000618902 SUMO1P63165 101 aaKnown RBP3.99□□□□□ -1.77
SHMT1-211ENST00000618902 GAGE1Q13065 139 aa3.99□□□□□ -1.77
SHMT1-211ENST00000618902 USF2Q15853 346 aaPredicted RBP3.99□□□□□ -1.77
SHMT1-211ENST00000618902 PDZD11Q5EBL8 140 aa3.99□□□□□ -1.77
SHMT1-211ENST00000618902 IBA57Q5T440 356 aaKnown RBP3.99□□□□□ -1.77
SHMT1-211ENST00000618902 C10orf113Q5VZT2 155 aa3.99□□□□□ -1.77
SHMT1-211ENST00000618902 CLEC19AQ6UXS0 136 aa3.99□□□□□ -1.77
SHMT1-211ENST00000618902 KIR2DL5AQ8N109 375 aa3.99□□□□□ -1.77
SHMT1-211ENST00000618902 TMEM116Q8NCL8 245 aa3.99□□□□□ -1.77
SHMT1-211ENST00000618902 OR9G4Q8NGQ1 327 aa3.99□□□□□ -1.77
SHMT1-211ENST00000618902 EEF1AKMT3Q96AZ1 226 aa3.99□□□□□ -1.77
SHMT1-211ENST00000618902 BORCS7Q96B45 105 aa3.99□□□□□ -1.77
SHMT1-211ENST00000618902 GPR82Q96P67 336 aa3.99□□□□□ -1.77
SHMT1-211ENST00000618902 SAMD10Q9BYL1 202 aa3.99□□□□□ -1.77
SHMT1-211ENST00000618902 ZNF256Q9Y2P7 627 aaPredicted RBP3.99□□□□□ -1.77
SHMT1-211ENST00000618902 YTHDF2Q9Y5A9 579 aaKnown RBP3.99□□□□□ -1.77
SHMT1-211ENST00000618902 KMT2CQ8NEZ4 4911 aaKnown RBP3.99□□□□□ -1.77
SHMT1-211ENST00000618902 TENM2Q9NT68 2774 aa3.99□□□□□ -1.77
SHMT1-211ENST00000618902 CSMD3Q7Z407 3707 aa3.98□□□□□ -1.77
SHMT1-211ENST00000618902 TRBV20OR9-2A0A075B6H5 130 aa3.98□□□□□ -1.77
SHMT1-211ENST00000618902 TRAV25A0A0B4J276 109 aa3.98□□□□□ -1.77
SHMT1-211ENST00000618902 IGHV3-35A0A0C4DH35 117 aa3.98□□□□□ -1.77
SHMT1-211ENST00000618902 SNURFLB1AK76 121 aa3.98□□□□□ -1.77
SHMT1-211ENST00000618902 K7EQM0 130 aa3.98□□□□□ -1.77
SHMT1-211ENST00000618902 COX7A2P2O60397 106 aa3.98□□□□□ -1.77
SHMT1-211ENST00000618902 ZNF253O75346 499 aa3.98□□□□□ -1.77
SHMT1-211ENST00000618902 IGLV1-51P01701 117 aa3.98□□□□□ -1.77
SHMT1-211ENST00000618902 APCSP02743 223 aa3.98□□□□□ -1.77
SHMT1-211ENST00000618902 CLEC3BP05452 202 aa3.98□□□□□ -1.77
SHMT1-211ENST00000618902 CRYBB3P26998 211 aa3.98□□□□□ -1.77
SHMT1-211ENST00000618902 GPR183P32249 361 aa3.98□□□□□ -1.77
SHMT1-211ENST00000618902 BMI1P35226 326 aa3.98□□□□□ -1.77
SHMT1-211ENST00000618902 FOXA3P55318 350 aaPredicted RBP3.98□□□□□ -1.77
SHMT1-211ENST00000618902 CMC4P56277 68 aaPredicted RBP3.98□□□□□ -1.77
SHMT1-211ENST00000618902 KRTAP10-11P60412 298 aa3.98□□□□□ -1.77
SHMT1-211ENST00000618902 NUTF2P61970 127 aaKnown RBP3.98□□□□□ -1.77
SHMT1-211ENST00000618902 Q6AWC8 147 aa3.98□□□□□ -1.77
SHMT1-211ENST00000618902 LCN12Q6JVE5 192 aa3.98□□□□□ -1.77
SHMT1-211ENST00000618902 PET117Q6UWS5 81 aa3.98□□□□□ -1.77
SHMT1-211ENST00000618902 TSKUQ8WUA8 353 aa3.98□□□□□ -1.77
SHMT1-211ENST00000618902 CHCHD1Q96BP2 118 aaKnown RBP3.98□□□□□ -1.77
SHMT1-211ENST00000618902 MISP3Q96FF7 219 aa3.98□□□□□ -1.77
SHMT1-211ENST00000618902 FMC1Q96HJ9 113 aa3.98□□□□□ -1.77
SHMT1-211ENST00000618902 FAM110AQ9BQ89 295 aa3.98□□□□□ -1.77
SHMT1-211ENST00000618902 PAXXQ9BUH6 204 aa3.98□□□□□ -1.77
SHMT1-211ENST00000618902 TMEM14CQ9P0S9 112 aa3.98□□□□□ -1.77
SHMT1-211ENST00000618902 ZNF492Q9P255 531 aa3.98□□□□□ -1.77
SHMT1-211ENST00000618902 EPDR1Q9UM22 224 aa3.98□□□□□ -1.77
SHMT1-211ENST00000618902 ZFP30Q9Y2G7 519 aa3.98□□□□□ -1.77
SHMT1-211ENST00000618902 SMAD5-AS1Q9Y6J3 95 aa3.98□□□□□ -1.77
SHMT1-211ENST00000618902 LYSTQ99698 3801 aa3.98□□□□□ -1.77
SHMT1-211ENST00000618902 TMEM238LA0A1B0GVL6 79 aa3.97□□□□□ -1.77
SHMT1-211ENST00000618902 OR2T8A6NH00 312 aa3.97□□□□□ -1.77
SHMT1-211ENST00000618902 ZNF705FA8MVS1 300 aaPredicted RBP3.97□□□□□ -1.77
SHMT1-211ENST00000618902 K7EMT4 169 aa3.97□□□□□ -1.77
SHMT1-211ENST00000618902 HYPMO75409 117 aa3.97□□□□□ -1.77
SHMT1-211ENST00000618902 SAP30O75446 220 aa3.97□□□□□ -1.77
SHMT1-211ENST00000618902 TOMM40O96008 361 aa3.97□□□□□ -1.77
SHMT1-211ENST00000618902 IGKV1-17P01599 117 aa3.97□□□□□ -1.77
SHMT1-211ENST00000618902 PRB2P02812 416 aaPredicted RBP3.97□□□□□ -1.77
SHMT1-211ENST00000618902 CSN3P07498 182 aa3.97□□□□□ -1.77
SHMT1-211ENST00000618902 CTSGP08311 255 aa3.97□□□□□ -1.77
SHMT1-211ENST00000618902 NBEAP1P0C6P0 100 aa3.97□□□□□ -1.77
SHMT1-211ENST00000618902 ZNF705DP0CH99 300 aaPredicted RBP3.97□□□□□ -1.77
SHMT1-211ENST00000618902 ZNF705BP0CI00 300 aaPredicted RBP3.97□□□□□ -1.77
SHMT1-211ENST00000618902 SYNJ2BPP57105 145 aa3.97□□□□□ -1.77
SHMT1-211ENST00000618902 UBE2G1P62253 170 aa3.97□□□□□ -1.77
SHMT1-211ENST00000618902 RELQ04864 619 aaPredicted RBP3.97□□□□□ -1.77
SHMT1-211ENST00000618902 CENPWQ5EE01 88 aa3.97□□□□□ -1.77
SHMT1-211ENST00000618902 GCSAMLQ5JQS6 135 aa3.97□□□□□ -1.77
SHMT1-211ENST00000618902 UNQ9165/PRO28630Q6UXU0 137 aa3.97□□□□□ -1.77
SHMT1-211ENST00000618902 TMEM136Q6ZRR5 245 aa3.97□□□□□ -1.77
SHMT1-211ENST00000618902 MIR17HGQ75NE6 70 aa3.97□□□□□ -1.77
SHMT1-211ENST00000618902 GTSCR1Q86UQ5 136 aa3.97□□□□□ -1.77
SHMT1-211ENST00000618902 OR8I2Q8N0Y5 310 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 87.6 ms