RNA–Protein interactions for RNA: ENST00000614488.4

SCAMP1-205, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 1 (best)

Gene SCAMP1, Length 1,276 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-205ENST00000614488 ALKQ9UM73 1620 aa1.37□□□□□ -2.19
SCAMP1-205ENST00000614488 CR1P17927 2039 aa1.37□□□□□ -2.19
SCAMP1-205ENST00000614488 CCNB3Q8WWL7 1395 aa1.37□□□□□ -2.19
SCAMP1-205ENST00000614488 CPS1P31327 1500 aa1.37□□□□□ -2.19
SCAMP1-205ENST00000614488 CUX1P39880 1505 aa1.37□□□□□ -2.19
SCAMP1-205ENST00000614488 ZMYM4Q5VZL5 1548 aa1.37□□□□□ -2.19
SCAMP1-205ENST00000614488 WIZO95785 1651 aa1.37□□□□□ -2.19
SCAMP1-205ENST00000614488 TRAV27A0A087WT01 109 aa1.37□□□□□ -2.19
SCAMP1-205ENST00000614488 TRAV16A0A0A6YYK6 109 aaPredicted RBP1.37□□□□□ -2.19
SCAMP1-205ENST00000614488 B4DSR2 109 aa1.37□□□□□ -2.19
SCAMP1-205ENST00000614488 UQCRQO14949 82 aa1.37□□□□□ -2.19
SCAMP1-205ENST00000614488 CTSDP07339 412 aaPredicted RBP1.37□□□□□ -2.19
SCAMP1-205ENST00000614488 METTL15P1P0C7V9 234 aa1.37□□□□□ -2.19
SCAMP1-205ENST00000614488 SMIM6P0DI80 62 aa1.37□□□□□ -2.19
SCAMP1-205ENST00000614488 COX6A1P12074 109 aa1.37□□□□□ -2.19
SCAMP1-205ENST00000614488 HLA-DRB4P13762 266 aa1.37□□□□□ -2.19
SCAMP1-205ENST00000614488 RBP2P50120 134 aa1.37□□□□□ -2.19
SCAMP1-205ENST00000614488 AQP4P55087 323 aa1.37□□□□□ -2.19
SCAMP1-205ENST00000614488 ESRGQ1W209 222 aa1.37□□□□□ -2.19
SCAMP1-205ENST00000614488 PABPC1L2AQ5JQF8 200 aa1.37□□□□□ -2.19
SCAMP1-205ENST00000614488 TMEM91Q6ZNR0 172 aa1.37□□□□□ -2.19
SCAMP1-205ENST00000614488 LINC00311Q8N616 119 aa1.37□□□□□ -2.19
SCAMP1-205ENST00000614488 TCTEX1D1Q8N7M0 179 aa1.37□□□□□ -2.19
SCAMP1-205ENST00000614488 OR4B1Q8NGF8 309 aa1.37□□□□□ -2.19
SCAMP1-205ENST00000614488 OR5D14Q8NGL3 314 aa1.37□□□□□ -2.19
SCAMP1-205ENST00000614488 POP5Q969H6 163 aaKnown RBP1.37□□□□□ -2.19
SCAMP1-205ENST00000614488 DIRC1Q969H9 104 aa1.37□□□□□ -2.19
SCAMP1-205ENST00000614488 SDF2Q99470 211 aa1.37□□□□□ -2.19
SCAMP1-205ENST00000614488 PDCD10Q9BUL8 212 aa1.37□□□□□ -2.19
SCAMP1-205ENST00000614488 SCN3BQ9NY72 215 aa1.37□□□□□ -2.19
SCAMP1-205ENST00000614488 SOX21Q9Y651 276 aaPredicted RBP1.37□□□□□ -2.19
SCAMP1-205ENST00000614488 HLA-DRB4X5D2U9 266 aa1.37□□□□□ -2.19
SCAMP1-205ENST00000614488 RIC1Q4ADV7 1423 aa1.37□□□□□ -2.19
SCAMP1-205ENST00000614488 FRMPD1Q5SYB0 1578 aa1.37□□□□□ -2.19
SCAMP1-205ENST00000614488 MICAL3Q7RTP6 2002 aa1.37□□□□□ -2.19
SCAMP1-205ENST00000614488 TRPM1Q7Z4N2 1603 aa1.37□□□□□ -2.19
SCAMP1-205ENST00000614488 RP1L1Q8IWN7 2480 aaPredicted RBP1.37□□□□□ -2.19
SCAMP1-205ENST00000614488 ARHGEF12Q9NZN5 1544 aa1.36□□□□□ -2.19
SCAMP1-205ENST00000614488 ZNF142P52746 1687 aaPredicted RBP1.36□□□□□ -2.19
SCAMP1-205ENST00000614488 CUL7Q14999 1698 aa1.36□□□□□ -2.19
SCAMP1-205ENST00000614488 KIAA1549Q9HCM3 1950 aa1.36□□□□□ -2.19
SCAMP1-205ENST00000614488 IGHV3-64A0A075B6Q5 118 aa1.36□□□□□ -2.19
SCAMP1-205ENST00000614488 TRAV1-1A0A0B4J248 108 aa1.36□□□□□ -2.19
SCAMP1-205ENST00000614488 A0A0G2JMM0 328 aa1.36□□□□□ -2.19
SCAMP1-205ENST00000614488 A0A1W2PPB8 328 aa1.36□□□□□ -2.19
SCAMP1-205ENST00000614488 C20orf202A1L168 122 aa1.36□□□□□ -2.19
SCAMP1-205ENST00000614488 KIR3DP1A8MWS1 328 aa1.36□□□□□ -2.19
SCAMP1-205ENST00000614488 CORTO00230 105 aa1.36□□□□□ -2.19
SCAMP1-205ENST00000614488 CITO14578 2027 aa1.36□□□□□ -2.19
SCAMP1-205ENST00000614488 SNAPC5O75971 98 aa1.36□□□□□ -2.19
SCAMP1-205ENST00000614488 NCR2O95944 276 aa1.36□□□□□ -2.19
SCAMP1-205ENST00000614488 CD14P08571 375 aa1.36□□□□□ -2.19
SCAMP1-205ENST00000614488 SLC25A4P12235 298 aa1.36□□□□□ -2.19
SCAMP1-205ENST00000614488 TPT1P13693 172 aaKnown RBP1.36□□□□□ -2.19
SCAMP1-205ENST00000614488 FABP4P15090 132 aa1.36□□□□□ -2.19
SCAMP1-205ENST00000614488 FGF7P21781 194 aa1.36□□□□□ -2.19
SCAMP1-205ENST00000614488 GUCA1AP43080 201 aaPredicted RBP1.36□□□□□ -2.19
SCAMP1-205ENST00000614488 HINT1P49773 126 aaPredicted RBP1.36□□□□□ -2.19
SCAMP1-205ENST00000614488 BLCAPP62952 87 aa1.36□□□□□ -2.19
SCAMP1-205ENST00000614488 MRPS10P82664 201 aaKnown RBP1.36□□□□□ -2.19
SCAMP1-205ENST00000614488 SS18Q15532 418 aa1.36□□□□□ -2.19
SCAMP1-205ENST00000614488 ZNF791Q3KP31 576 aaPredicted RBP1.36□□□□□ -2.19
SCAMP1-205ENST00000614488 TMEM155Q4W5P6 130 aa1.36□□□□□ -2.19
SCAMP1-205ENST00000614488 MEIG1Q5JSS6 88 aa1.36□□□□□ -2.19
SCAMP1-205ENST00000614488 CLLU1Q5K131 121 aa1.36□□□□□ -2.19
SCAMP1-205ENST00000614488 RICTORQ6R327 1708 aa1.36□□□□□ -2.19
SCAMP1-205ENST00000614488 IZUMO2Q6UXV1 221 aa1.36□□□□□ -2.19
SCAMP1-205ENST00000614488 Q6ZSA8 131 aa1.36□□□□□ -2.19
SCAMP1-205ENST00000614488 TEN1Q86WV5 123 aa1.36□□□□□ -2.19
SCAMP1-205ENST00000614488 RPS19BP1Q86WX3 136 aaKnown RBP1.36□□□□□ -2.19
SCAMP1-205ENST00000614488 ZNF436-AS1Q8NC38 126 aaPredicted RBP1.36□□□□□ -2.19
SCAMP1-205ENST00000614488 OR4X2Q8NGF9 303 aa1.36□□□□□ -2.19
SCAMP1-205ENST00000614488 MCEEQ96PE7 176 aa1.36□□□□□ -2.19
SCAMP1-205ENST00000614488 TRPM7Q96QT4 1865 aa1.36□□□□□ -2.19
SCAMP1-205ENST00000614488 ERBINQ96RT1 1412 aa1.36□□□□□ -2.19
SCAMP1-205ENST00000614488 DNAJC15Q9Y5T4 150 aa1.36□□□□□ -2.19
SCAMP1-205ENST00000614488 HELZP42694 1942 aaKnown RBP1.36□□□□□ -2.19
SCAMP1-205ENST00000614488 NHSL1Q5SYE7 1610 aa1.36□□□□□ -2.19
SCAMP1-205ENST00000614488 ABCA9Q8IUA7 1624 aa1.36□□□□□ -2.19
SCAMP1-205ENST00000614488 SCAF11Q99590 1463 aaKnown RBP1.36□□□□□ -2.19
SCAMP1-205ENST00000614488 MBD5Q9P267 1494 aa1.36□□□□□ -2.19
SCAMP1-205ENST00000614488 FAM135AQ9P2D6 1515 aa1.35□□□□□ -2.19
SCAMP1-205ENST00000614488 CNTLNQ9NXG0 1405 aa1.35□□□□□ -2.19
SCAMP1-205ENST00000614488 TMSB15BA0A087X1C1 80 aa1.35□□□□□ -2.19
SCAMP1-205ENST00000614488 IGKV2D-26A0A0A0MRZ7 120 aa1.35□□□□□ -2.19
SCAMP1-205ENST00000614488 OR51F1A6NGY5 319 aa1.35□□□□□ -2.19
SCAMP1-205ENST00000614488 HMSDA8MTL9 139 aa1.35□□□□□ -2.19
SCAMP1-205ENST00000614488 BBIP1A8MTZ0 92 aa1.35□□□□□ -2.19
SCAMP1-205ENST00000614488 ODF3BA8MYP8 253 aa1.35□□□□□ -2.19
SCAMP1-205ENST00000614488 CCDC179H3BU77 68 aa1.35□□□□□ -2.19
SCAMP1-205ENST00000614488 OR1I1O60431 355 aa1.35□□□□□ -2.19
SCAMP1-205ENST00000614488 ZNF737O75373 536 aa1.35□□□□□ -2.19
SCAMP1-205ENST00000614488 IGLV1-51P01701 117 aa1.35□□□□□ -2.19
SCAMP1-205ENST00000614488 PMP2P02689 132 aa1.35□□□□□ -2.19
SCAMP1-205ENST00000614488 CD3DP04234 171 aa1.35□□□□□ -2.19
SCAMP1-205ENST00000614488 AKAIN1P0CW23 69 aa1.35□□□□□ -2.19
SCAMP1-205ENST00000614488 HIST1H1BP16401 226 aaKnown RBP1.35□□□□□ -2.19
SCAMP1-205ENST00000614488 PEBP1P30086 187 aaKnown RBP1.35□□□□□ -2.19
SCAMP1-205ENST00000614488 TMEM258P61165 79 aa1.35□□□□□ -2.19
SCAMP1-205ENST00000614488 PCBD1P61457 104 aa1.35□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 1143.7 ms