RNA–Protein interactions for RNA: ENST00000613744.4

POLR2J3-220, Transcript of RNA polymerase II subunit J3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene POLR2J3, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-220ENST00000613744 DEFB113Q30KQ7 82 aa17.25■□□□□ 0.35
POLR2J3-220ENST00000613744 FAM104BQ5XKR9 115 aa17.25■□□□□ 0.35
POLR2J3-220ENST00000613744 BCL6BQ8N143 479 aaPredicted RBP17.25■□□□□ 0.35
POLR2J3-220ENST00000613744 TMEM116Q8NCL8 245 aa17.25■□□□□ 0.35
POLR2J3-220ENST00000613744 CCL13Q99616 98 aa17.25■□□□□ 0.35
POLR2J3-220ENST00000613744 TM2D2Q9BX73 214 aa17.25■□□□□ 0.35
POLR2J3-220ENST00000613744 MRPL20Q9BYC9 149 aaKnown RBP17.25■□□□□ 0.35
POLR2J3-220ENST00000613744 PDZD2O15018 2839 aa17.25■□□□□ 0.35
POLR2J3-220ENST00000613744 NAV2Q8IVL1 2488 aa17.25■□□□□ 0.35
POLR2J3-220ENST00000613744 FBLL1A6NHQ2 334 aaKnown RBP17.24■□□□□ 0.35
POLR2J3-220ENST00000613744 E9PLD3 99 aa17.24■□□□□ 0.35
POLR2J3-220ENST00000613744 K7EQM0 130 aa17.24■□□□□ 0.35
POLR2J3-220ENST00000613744 FLNBO75369 2602 aaKnown RBP17.24■□□□□ 0.35
POLR2J3-220ENST00000613744 FAM106CPP0CH98 169 aa17.24■□□□□ 0.35
POLR2J3-220ENST00000613744 LOXL1Q08397 574 aaPredicted RBP17.24■□□□□ 0.35
POLR2J3-220ENST00000613744 SCGB2A2Q13296 93 aa17.24■□□□□ 0.35
POLR2J3-220ENST00000613744 FAM106AQ4KMX7 169 aa17.24■□□□□ 0.35
POLR2J3-220ENST00000613744 TEX36Q5VZQ5 186 aa17.24■□□□□ 0.35
POLR2J3-220ENST00000613744 MTURNQ8N3F0 131 aa17.24■□□□□ 0.35
POLR2J3-220ENST00000613744 HIGD1AQ9Y241 93 aa17.24■□□□□ 0.35
POLR2J3-220ENST00000613744 ZNF785A8K8V0 405 aa17.23■□□□□ 0.35
POLR2J3-220ENST00000613744 D6R8Y8 96 aa17.23■□□□□ 0.35
POLR2J3-220ENST00000613744 GCSHP23434 173 aa17.23■□□□□ 0.35
POLR2J3-220ENST00000613744 GOLT1AQ6ZVE7 132 aa17.23■□□□□ 0.35
POLR2J3-220ENST00000613744 FAM216BQ8N7L0 139 aa17.23■□□□□ 0.35
POLR2J3-220ENST00000613744 ZMAT4Q9H898 229 aa17.23■□□□□ 0.35
POLR2J3-220ENST00000613744 RITA1Q96K30 269 aa17.22■□□□□ 0.35
POLR2J3-220ENST00000613744 CLUHP3Q96NS8 147 aa17.22■□□□□ 0.35
POLR2J3-220ENST00000613744 SELENOKQ9Y6D0 94 aa17.22■□□□□ 0.35
POLR2J3-220ENST00000613744 A0A1W2PRD5 423 aa17.22■□□□□ 0.35
POLR2J3-220ENST00000613744 A0A1W2PRF3 423 aa17.22■□□□□ 0.35
POLR2J3-220ENST00000613744 A0A1W2PRM7 423 aa17.22■□□□□ 0.35
POLR2J3-220ENST00000613744 FXYD2P54710 66 aa17.22■□□□□ 0.35
POLR2J3-220ENST00000613744 TAL2Q16559 108 aa17.22■□□□□ 0.35
POLR2J3-220ENST00000613744 LYPD1Q8N2G4 141 aa17.22■□□□□ 0.35
POLR2J3-220ENST00000613744 TRAV8-1A0A0A6YYK1 113 aa17.21■□□□□ 0.35
POLR2J3-220ENST00000613744 ZNF502Q8TBZ5 544 aa17.21■□□□□ 0.35
POLR2J3-220ENST00000613744 GAFA1Q96PS6 74 aa17.21■□□□□ 0.35
POLR2J3-220ENST00000613744 CHAC1Q9BUX1 264 aa17.21■□□□□ 0.35
POLR2J3-220ENST00000613744 LINC01546A6NGU7 62 aa17.2■□□□□ 0.34
POLR2J3-220ENST00000613744 BEX4Q9NWD9 120 aaPredicted RBP17.2■□□□□ 0.34
POLR2J3-220ENST00000613744 LINC00312Q9Y6C7 94 aa17.2■□□□□ 0.34
POLR2J3-220ENST00000613744 CKS1BP61024 79 aa17.19■□□□□ 0.34
POLR2J3-220ENST00000613744 VMA21Q3ZAQ7 101 aa17.19■□□□□ 0.34
POLR2J3-220ENST00000613744 CCDC144NLQ6NUI1 221 aa17.19■□□□□ 0.34
POLR2J3-220ENST00000613744 LYPD2Q6UXB3 125 aa17.19■□□□□ 0.34
POLR2J3-220ENST00000613744 BPESC1Q9GZL8 116 aa17.19■□□□□ 0.34
POLR2J3-220ENST00000613744 LOC389332A0A1B0GUA5 103 aa17.19■□□□□ 0.34
POLR2J3-220ENST00000613744 A0A1W2PPI3 338 aa17.19■□□□□ 0.34
POLR2J3-220ENST00000613744 IGLV2-23P01705 113 aa17.19■□□□□ 0.34
POLR2J3-220ENST00000613744 IGHV3-48P01763 117 aa17.19■□□□□ 0.34
POLR2J3-220ENST00000613744 ZNF788Q6ZQV5 615 aa17.19■□□□□ 0.34
POLR2J3-220ENST00000613744 CEND1Q8N111 149 aa17.19■□□□□ 0.34
POLR2J3-220ENST00000613744 SLC25A39Q9BZJ4 359 aaPredicted RBP17.19■□□□□ 0.34
POLR2J3-220ENST00000613744 PSG8Q9UQ74 426 aa17.19■□□□□ 0.34
POLR2J3-220ENST00000613744 F11RQ9Y624 299 aaKnown RBP17.19■□□□□ 0.34
POLR2J3-220ENST00000613744 EVI2AP22794 236 aa17.18■□□□□ 0.34
POLR2J3-220ENST00000613744 RAB9AP51151 201 aa17.18■□□□□ 0.34
POLR2J3-220ENST00000613744 MRAP2Q96G30 205 aa17.18■□□□□ 0.34
POLR2J3-220ENST00000613744 IGHV4-30-2A0A087WSY4 118 aa17.17■□□□□ 0.34
POLR2J3-220ENST00000613744 C10orf55Q5SWW7 151 aa17.17■□□□□ 0.34
POLR2J3-220ENST00000613744 TIMD4Q96H15 378 aa17.17■□□□□ 0.34
POLR2J3-220ENST00000613744 WI2-2373I1.2A0A1W2PRP0 233 aa17.17■□□□□ 0.34
POLR2J3-220ENST00000613744 C8orf31Q8N9H6 132 aa17.17■□□□□ 0.34
POLR2J3-220ENST00000613744 SERTM2A0A1B0GWG4 89 aa17.16■□□□□ 0.34
POLR2J3-220ENST00000613744 IGLL5B9A064 214 aa17.16■□□□□ 0.34
POLR2J3-220ENST00000613744 MRPL51Q4U2R6 128 aaKnown RBP17.16■□□□□ 0.34
POLR2J3-220ENST00000613744 Q5PR19 223 aa17.16■□□□□ 0.34
POLR2J3-220ENST00000613744 NOTCH2Q04721 2471 aa17.16■□□□□ 0.34
POLR2J3-220ENST00000613744 PRSS47A8MTI9 375 aa17.16■□□□□ 0.34
POLR2J3-220ENST00000613744 H3BTX0 84 aa17.16■□□□□ 0.34
POLR2J3-220ENST00000613744 C10orf105Q8TEF2 133 aa17.16■□□□□ 0.34
POLR2J3-220ENST00000613744 SPAG8Q99932 426 aaPredicted RBP17.16■□□□□ 0.34
POLR2J3-220ENST00000613744 DKK2Q9UBU2 259 aa17.16■□□□□ 0.34
POLR2J3-220ENST00000613744 CCDC168Q8NDH2 2452 aa17.15■□□□□ 0.34
POLR2J3-220ENST00000613744 EXOC3-AS1Q8N2X6 119 aa17.15■□□□□ 0.34
POLR2J3-220ENST00000613744 CTSZQ9UBR2 303 aa17.15■□□□□ 0.34
POLR2J3-220ENST00000613744 HHLA3Q9XRX5 114 aa17.15■□□□□ 0.34
POLR2J3-220ENST00000613744 PRRC2AP48634 2157 aaKnown RBP17.15■□□□□ 0.34
POLR2J3-220ENST00000613744 TRBV19A0A075B6N1 114 aa17.14■□□□□ 0.33
POLR2J3-220ENST00000613744 WFDC2Q14508 124 aa17.14■□□□□ 0.33
POLR2J3-220ENST00000613744 AMN1Q8IY45 258 aa17.14■□□□□ 0.33
POLR2J3-220ENST00000613744 LINC00311Q8N616 119 aa17.14■□□□□ 0.33
POLR2J3-220ENST00000613744 ZNF479Q96JC4 524 aa17.14■□□□□ 0.33
POLR2J3-220ENST00000613744 PIMREGQ9BSJ6 248 aa17.14■□□□□ 0.33
POLR2J3-220ENST00000613744 TRBV25-1A0A075B6N4 114 aa17.14■□□□□ 0.33
POLR2J3-220ENST00000613744 CRIP1P50238 77 aa17.14■□□□□ 0.33
POLR2J3-220ENST00000613744 ODF1Q14990 250 aa17.14■□□□□ 0.33
POLR2J3-220ENST00000613744 TM4SF20Q53R12 229 aa17.14■□□□□ 0.33
POLR2J3-220ENST00000613744 LYZL1Q6UWQ5 148 aa17.14■□□□□ 0.33
POLR2J3-220ENST00000613744 LRRC75A-AS1Q8N1F1 130 aa17.14■□□□□ 0.33
POLR2J3-220ENST00000613744 C18orf15Q96N68 181 aa17.14■□□□□ 0.33
POLR2J3-220ENST00000613744 ZNRD1Q9P1U0 126 aa17.14■□□□□ 0.33
POLR2J3-220ENST00000613744 SLC25A17O43808 307 aa17.13■□□□□ 0.33
POLR2J3-220ENST00000613744 MC5RP33032 325 aa17.13■□□□□ 0.33
POLR2J3-220ENST00000613744 NHP2Q9NX24 153 aaKnown RBP17.13■□□□□ 0.33
POLR2J3-220ENST00000613744 TNFRSF13BO14836 293 aaPredicted RBP17.12■□□□□ 0.33
POLR2J3-220ENST00000613744 NDUFB3O43676 98 aa17.12■□□□□ 0.33
POLR2J3-220ENST00000613744 FCN3O75636 299 aa17.12■□□□□ 0.33
POLR2J3-220ENST00000613744 ATP5LO75964 103 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms