RNA–Protein interactions for RNA: ENST00000613459.4

HMGXB3-206, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-206ENST00000613459 BVES-AS1Q5T3Y7 98 aa13.94□□□□□ -0.18
HMGXB3-206ENST00000613459 C20orf78Q9BR46 151 aa13.94□□□□□ -0.18
HMGXB3-206ENST00000613459 K7EMI3 77 aa13.94□□□□□ -0.18
HMGXB3-206ENST00000613459 HLA-DRB4P13762 266 aa13.94□□□□□ -0.18
HMGXB3-206ENST00000613459 HLA-DRB4X5D2U9 266 aa13.94□□□□□ -0.18
HMGXB3-206ENST00000613459 LINC00205P59089 165 aa13.93□□□□□ -0.18
HMGXB3-206ENST00000613459 PLXNA3P51805 1871 aa13.93□□□□□ -0.18
HMGXB3-206ENST00000613459 C17orf58Q2M2W7 97 aa13.93□□□□□ -0.18
HMGXB3-206ENST00000613459 ZNF726P1Q15940 193 aa13.93□□□□□ -0.18
HMGXB3-206ENST00000613459 POU2AF1Q16633 256 aa13.93□□□□□ -0.18
HMGXB3-206ENST00000613459 ZNF561-AS1K7EIQ3 104 aa13.93□□□□□ -0.18
HMGXB3-206ENST00000613459 C8orf86Q6ZUL3 223 aa13.93□□□□□ -0.18
HMGXB3-206ENST00000613459 CYYR1Q96J86 154 aa13.93□□□□□ -0.18
HMGXB3-206ENST00000613459 TMEM243Q9BU79 118 aa13.93□□□□□ -0.18
HMGXB3-206ENST00000613459 ZNF114Q8NC26 417 aa13.93□□□□□ -0.18
HMGXB3-206ENST00000613459 RMI2Q96E14 147 aa13.92□□□□□ -0.18
HMGXB3-206ENST00000613459 FGF6P10767 208 aa13.92□□□□□ -0.18
HMGXB3-206ENST00000613459 CDKN1BP46527 198 aa13.92□□□□□ -0.18
HMGXB3-206ENST00000613459 DKK1O94907 266 aa13.92□□□□□ -0.18
HMGXB3-206ENST00000613459 IGLL1P15814 213 aa13.92□□□□□ -0.18
HMGXB3-206ENST00000613459 PRO1854Q9UHT4 67 aa13.92□□□□□ -0.18
HMGXB3-206ENST00000613459 K7ENP7 123 aa13.91□□□□□ -0.18
HMGXB3-206ENST00000613459 GAGE12HA6NDE8 117 aa13.91□□□□□ -0.18
HMGXB3-206ENST00000613459 SDHAF1A6NFY7 115 aa13.91□□□□□ -0.18
HMGXB3-206ENST00000613459 IGLV1-44P01699 117 aa13.91□□□□□ -0.18
HMGXB3-206ENST00000613459 MRPL53Q96EL3 112 aaKnown RBP13.91□□□□□ -0.18
HMGXB3-206ENST00000613459 TP53BP1Q12888 1972 aaPredicted RBP13.91□□□□□ -0.18
HMGXB3-206ENST00000613459 LOXP28300 417 aaPredicted RBP13.91□□□□□ -0.18
HMGXB3-206ENST00000613459 HOXD3P31249 432 aaPredicted RBP13.91□□□□□ -0.18
HMGXB3-206ENST00000613459 DAD1P61803 113 aa13.9□□□□□ -0.18
HMGXB3-206ENST00000613459 DEFB130BP0DP73 79 aa13.9□□□□□ -0.18
HMGXB3-206ENST00000613459 DEFB130AP0DP74 79 aa13.9□□□□□ -0.18
HMGXB3-206ENST00000613459 APOC4P55056 127 aa13.9□□□□□ -0.18
HMGXB3-206ENST00000613459 TRAV13-2A0A0B4J235 113 aa13.9□□□□□ -0.18
HMGXB3-206ENST00000613459 AZU1P20160 251 aa13.9□□□□□ -0.18
HMGXB3-206ENST00000613459 CITED2Q99967 270 aaPredicted RBP13.9□□□□□ -0.18
HMGXB3-206ENST00000613459 SMIM2Q9BVW6 85 aa13.9□□□□□ -0.18
HMGXB3-206ENST00000613459 C15orf65H3BRN8 121 aa13.89□□□□□ -0.19
HMGXB3-206ENST00000613459 HLA-DMBP28068 263 aa13.89□□□□□ -0.19
HMGXB3-206ENST00000613459 PRSS57Q6UWY2 283 aa13.89□□□□□ -0.19
HMGXB3-206ENST00000613459 SIGLEC8Q9NYZ4 499 aa13.89□□□□□ -0.19
HMGXB3-206ENST00000613459 HERVK_113P63121 156 aa13.89□□□□□ -0.19
HMGXB3-206ENST00000613459 KAAG1Q9UBP8 84 aa13.89□□□□□ -0.19
HMGXB3-206ENST00000613459 CITED1Q99966 193 aa13.89□□□□□ -0.19
HMGXB3-206ENST00000613459 IGLV3-9A0A075B6K5 115 aa13.89□□□□□ -0.19
HMGXB3-206ENST00000613459 GAGE12JA6NER3 117 aa13.89□□□□□ -0.19
HMGXB3-206ENST00000613459 F8VRH5 84 aa13.89□□□□□ -0.19
HMGXB3-206ENST00000613459 GAGE4Q13068 117 aa13.89□□□□□ -0.19
HMGXB3-206ENST00000613459 GAGE5Q13069 117 aa13.89□□□□□ -0.19
HMGXB3-206ENST00000613459 ARTNQ5T4W7 220 aa13.89□□□□□ -0.19
HMGXB3-206ENST00000613459 ELANEP08246 267 aa13.88□□□□□ -0.19
HMGXB3-206ENST00000613459 Q6ZR03 302 aa13.88□□□□□ -0.19
HMGXB3-206ENST00000613459 ETDBQ3ZM63 59 aa13.88□□□□□ -0.19
HMGXB3-206ENST00000613459 LENEPQ9Y5L5 61 aa13.88□□□□□ -0.19
HMGXB3-206ENST00000613459 IGKV1-39P01597 117 aa13.88□□□□□ -0.19
HMGXB3-206ENST00000613459 IGKV1D-39P04432 117 aa13.88□□□□□ -0.19
HMGXB3-206ENST00000613459 SPINK13Q1W4C9 94 aa13.88□□□□□ -0.19
HMGXB3-206ENST00000613459 NKAPP1Q8N9T2 125 aa13.88□□□□□ -0.19
HMGXB3-206ENST00000613459 CNOT1A5YKK6 2376 aaKnown RBP13.88□□□□□ -0.19
HMGXB3-206ENST00000613459 IGHG4P01861 327 aa13.88□□□□□ -0.19
HMGXB3-206ENST00000613459 CARD19Q96LW7 228 aa13.87□□□□□ -0.19
HMGXB3-206ENST00000613459 NDUFA12Q9UI09 145 aa13.87□□□□□ -0.19
HMGXB3-206ENST00000613459 ZNF134P52741 427 aa13.87□□□□□ -0.19
HMGXB3-206ENST00000613459 ANXA2RQ3ZCQ2 193 aa13.87□□□□□ -0.19
HMGXB3-206ENST00000613459 WIPF2Q8TF74 440 aaPredicted RBP13.87□□□□□ -0.19
HMGXB3-206ENST00000613459 THADAQ6YHU6 1953 aa13.87□□□□□ -0.19
HMGXB3-206ENST00000613459 RBAKDNA6NC62 111 aa13.87□□□□□ -0.19
HMGXB3-206ENST00000613459 MORN5Q5VZ52 161 aa13.86□□□□□ -0.19
HMGXB3-206ENST00000613459 IGLV3-1P01715 115 aa13.86□□□□□ -0.19
HMGXB3-206ENST00000613459 RUSC1-AS1Q66K80 236 aa13.86□□□□□ -0.19
HMGXB3-206ENST00000613459 RHOHQ15669 191 aa13.86□□□□□ -0.19
HMGXB3-206ENST00000613459 XCL2Q9UBD3 114 aa13.86□□□□□ -0.19
HMGXB3-206ENST00000613459 VWA8A3KMH1 1905 aa13.86□□□□□ -0.19
HMGXB3-206ENST00000613459 SBF1O95248 1867 aa13.86□□□□□ -0.19
HMGXB3-206ENST00000613459 DEFB121Q5J5C9 76 aa13.86□□□□□ -0.19
HMGXB3-206ENST00000613459 MED12Q93074 2177 aa13.86□□□□□ -0.19
HMGXB3-206ENST00000613459 KLF5Q13887 457 aaPredicted RBP13.85□□□□□ -0.19
HMGXB3-206ENST00000613459 DSCR8Q96T75 97 aa13.85□□□□□ -0.19
HMGXB3-206ENST00000613459 IGHV7-4-1A0A0J9YVY3 117 aa13.85□□□□□ -0.19
HMGXB3-206ENST00000613459 LINC01545Q5VT33 79 aa13.85□□□□□ -0.19
HMGXB3-206ENST00000613459 FXYD5Q96DB9 178 aa13.85□□□□□ -0.19
HMGXB3-206ENST00000613459 IGLC1P0CG04 106 aa13.85□□□□□ -0.19
HMGXB3-206ENST00000613459 TMEM126AQ9H061 195 aa13.85□□□□□ -0.19
HMGXB3-206ENST00000613459 PROK2Q9HC23 129 aa13.85□□□□□ -0.19
HMGXB3-206ENST00000613459 MRPL35Q9NZE8 188 aaKnown RBP13.85□□□□□ -0.19
HMGXB3-206ENST00000613459 RLFQ13129 1914 aa13.85□□□□□ -0.19
HMGXB3-206ENST00000613459 WDR86Q86TI4 376 aa13.85□□□□□ -0.19
HMGXB3-206ENST00000613459 EP300Q09472 2414 aaPredicted RBP13.85□□□□□ -0.19
HMGXB3-206ENST00000613459 SUMO4Q6EEV6 95 aa13.85□□□□□ -0.19
HMGXB3-206ENST00000613459 ZNF493Q6ZR52 646 aa13.85□□□□□ -0.19
HMGXB3-206ENST00000613459 CRLF1O75462 422 aa13.84□□□□□ -0.19
HMGXB3-206ENST00000613459 LTAP01374 205 aa13.84□□□□□ -0.19
HMGXB3-206ENST00000613459 WT1-ASQ06250 92 aa13.84□□□□□ -0.19
HMGXB3-206ENST00000613459 ANKRD29Q8N6D5 301 aa13.84□□□□□ -0.19
HMGXB3-206ENST00000613459 LYPD6BQ8NI32 183 aa13.84□□□□□ -0.19
HMGXB3-206ENST00000613459 KIR2DL5BA0A0G2JN68 375 aa13.84□□□□□ -0.19
HMGXB3-206ENST00000613459 KIR2DL5BA0A0G2JPC4 375 aa13.84□□□□□ -0.19
HMGXB3-206ENST00000613459 KIR2DL5AQ8N109 375 aa13.84□□□□□ -0.19
HMGXB3-206ENST00000613459 TRAV26-2A0A0B4J265 109 aa13.84□□□□□ -0.19
HMGXB3-206ENST00000613459 F5H768 121 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 96.7 ms