RNA–Protein interactions for RNA: ENST00000612369.4

VCX3A-203, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 812 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-203ENST00000612369 C7orf71A4D174 169 aa12.81□□□□□ -0.36
VCX3A-203ENST00000612369 SNURFLB1AK76 121 aa12.81□□□□□ -0.36
VCX3A-203ENST00000612369 KLLNB2CW77 178 aa12.81□□□□□ -0.36
VCX3A-203ENST00000612369 ERCC8Q13216 396 aa12.81□□□□□ -0.36
VCX3A-203ENST00000612369 LYPD1Q8N2G4 141 aa12.81□□□□□ -0.36
VCX3A-203ENST00000612369 LINC00612Q8N6U2 182 aa12.81□□□□□ -0.36
VCX3A-203ENST00000612369 OR7C2O60412 319 aa12.8□□□□□ -0.36
VCX3A-203ENST00000612369 CRISP2P16562 243 aa12.8□□□□□ -0.36
VCX3A-203ENST00000612369 FFAR4Q5NUL3 377 aa12.8□□□□□ -0.36
VCX3A-203ENST00000612369 TMEM78Q5T7P6 136 aa12.8□□□□□ -0.36
VCX3A-203ENST00000612369 LINC00467Q9BRT7 94 aa12.8□□□□□ -0.36
VCX3A-203ENST00000612369 ZNF324O75467 553 aaPredicted RBP12.79□□□□□ -0.36
VCX3A-203ENST00000612369 PTTG1O95997 202 aa12.79□□□□□ -0.36
VCX3A-203ENST00000612369 OR10J4P0C629 311 aa12.79□□□□□ -0.36
VCX3A-203ENST00000612369 TAS2R45P59539 299 aa12.79□□□□□ -0.36
VCX3A-203ENST00000612369 DAZ2Q13117 558 aaKnown RBP12.79□□□□□ -0.36
VCX3A-203ENST00000612369 FAM122CQ6P4D5 195 aa12.79□□□□□ -0.36
VCX3A-203ENST00000612369 ZNF680Q8NEM1 530 aa12.79□□□□□ -0.36
VCX3A-203ENST00000612369 SMIM3Q9BZL3 60 aa12.79□□□□□ -0.36
VCX3A-203ENST00000612369 ALG5Q9Y673 324 aa12.79□□□□□ -0.36
VCX3A-203ENST00000612369 TRBV7-9A0A0J9YWB2 115 aa12.78□□□□□ -0.36
VCX3A-203ENST00000612369 GPX1P07203 203 aa12.78□□□□□ -0.36
VCX3A-203ENST00000612369 CSN1S1P47710 185 aa12.78□□□□□ -0.36
VCX3A-203ENST00000612369 KHDC3LQ587J8 217 aa12.78□□□□□ -0.36
VCX3A-203ENST00000612369 ATG101Q9BSB4 218 aa12.78□□□□□ -0.36
VCX3A-203ENST00000612369 ZNF492Q9P255 531 aa12.78□□□□□ -0.36
VCX3A-203ENST00000612369 IGKV2-40A0A087WW87 121 aaPredicted RBP12.77□□□□□ -0.37
VCX3A-203ENST00000612369 RBAKDNA6NC62 111 aa12.77□□□□□ -0.37
VCX3A-203ENST00000612369 M0R2N4 97 aa12.77□□□□□ -0.37
VCX3A-203ENST00000612369 IGKV2D-40P01614 121 aaPredicted RBP12.77□□□□□ -0.37
VCX3A-203ENST00000612369 ANXA2RQ3ZCQ2 193 aa12.77□□□□□ -0.37
VCX3A-203ENST00000612369 Q6ZR54 194 aa12.77□□□□□ -0.37
VCX3A-203ENST00000612369 EIF4E3Q8N5X7 224 aaKnown RBP12.77□□□□□ -0.37
VCX3A-203ENST00000612369 ZNF503Q96F45 646 aa12.77□□□□□ -0.37
VCX3A-203ENST00000612369 PHYHIPLQ96FC7 376 aa12.77□□□□□ -0.37
VCX3A-203ENST00000612369 VGLL1Q99990 258 aa12.77□□□□□ -0.37
VCX3A-203ENST00000612369 NUDT3O95989 172 aa12.76□□□□□ -0.37
VCX3A-203ENST00000612369 RNASE4P34096 147 aaKnown RBP12.76□□□□□ -0.37
VCX3A-203ENST00000612369 ZNF138P52744 262 aa12.76□□□□□ -0.37
VCX3A-203ENST00000612369 RANP62826 216 aaKnown RBP12.76□□□□□ -0.37
VCX3A-203ENST00000612369 UBE2L3P68036 154 aaKnown RBP12.76□□□□□ -0.37
VCX3A-203ENST00000612369 CD300CQ08708 224 aa12.76□□□□□ -0.37
VCX3A-203ENST00000612369 BTN1A1Q13410 526 aa12.76□□□□□ -0.37
VCX3A-203ENST00000612369 HECTD4Q9Y4D8 3996 aa12.75□□□□□ -0.37
VCX3A-203ENST00000612369 IGLV2-18A0A075B6J9 118 aa12.75□□□□□ -0.37
VCX3A-203ENST00000612369 GAGE12BA1L429 117 aa12.75□□□□□ -0.37
VCX3A-203ENST00000612369 GAGE7O76087 117 aa12.75□□□□□ -0.37
VCX3A-203ENST00000612369 GAGE12FP0CL80 117 aa12.75□□□□□ -0.37
VCX3A-203ENST00000612369 GAGE12GP0CL81 117 aa12.75□□□□□ -0.37
VCX3A-203ENST00000612369 GAGE12IP0CL82 117 aa12.75□□□□□ -0.37
VCX3A-203ENST00000612369 M6PRP20645 277 aa12.75□□□□□ -0.37
VCX3A-203ENST00000612369 CCL18P55774 89 aa12.75□□□□□ -0.37
VCX3A-203ENST00000612369 ACOT6Q3I5F7 207 aaPredicted RBP12.75□□□□□ -0.37
VCX3A-203ENST00000612369 ZFAND2AQ8N6M9 145 aa12.75□□□□□ -0.37
VCX3A-203ENST00000612369 RXFP4Q8TDU9 374 aa12.75□□□□□ -0.37
VCX3A-203ENST00000612369 MED28Q9H204 178 aa12.75□□□□□ -0.37
VCX3A-203ENST00000612369 Q9H3A6 140 aa12.75□□□□□ -0.37
VCX3A-203ENST00000612369 WFDC1Q9HC57 220 aa12.75□□□□□ -0.37
VCX3A-203ENST00000612369 NACAE9PAV3 2078 aa12.74□□□□□ -0.37
VCX3A-203ENST00000612369 OR5I1Q13606 314 aa12.74□□□□□ -0.37
VCX3A-203ENST00000612369 C11orf72Q8NBR9 251 aa12.74□□□□□ -0.37
VCX3A-203ENST00000612369 C18orf15Q96N68 181 aa12.74□□□□□ -0.37
VCX3A-203ENST00000612369 DNAH2Q9P225 4427 aa12.74□□□□□ -0.37
VCX3A-203ENST00000612369 A0A1W2PPV4 95 aa12.73□□□□□ -0.37
VCX3A-203ENST00000612369 H3BNG1 76 aa12.73□□□□□ -0.37
VCX3A-203ENST00000612369 RTL8CO15255 209 aa12.73□□□□□ -0.37
VCX3A-203ENST00000612369 ZNF266Q14584 549 aa12.73□□□□□ -0.37
VCX3A-203ENST00000612369 SOHLH1Q5JUK2 328 aa12.73□□□□□ -0.37
VCX3A-203ENST00000612369 IBA57Q5T440 356 aaKnown RBP12.73□□□□□ -0.37
VCX3A-203ENST00000612369 PQLC2Q6ZP29 291 aa12.73□□□□□ -0.37
VCX3A-203ENST00000612369 ASB13Q8WXK3 278 aa12.73□□□□□ -0.37
VCX3A-203ENST00000612369 GNPNAT1Q96EK6 184 aaPredicted RBP12.73□□□□□ -0.37
VCX3A-203ENST00000612369 GSN-AS1Q9NRJ2 163 aa12.73□□□□□ -0.37
VCX3A-203ENST00000612369 LENEPQ9Y5L5 61 aa12.73□□□□□ -0.37
VCX3A-203ENST00000612369 TRAV26-1A0A087WT03 109 aa12.72□□□□□ -0.37
VCX3A-203ENST00000612369 PRSS29PA6NIE9 313 aa12.72□□□□□ -0.37
VCX3A-203ENST00000612369 RGS13O14921 159 aa12.72□□□□□ -0.37
VCX3A-203ENST00000612369 TCL1AP56279 114 aa12.72□□□□□ -0.37
VCX3A-203ENST00000612369 FAM74A1Q5RGS3 127 aa12.72□□□□□ -0.37
VCX3A-203ENST00000612369 Q6ZTI0 123 aa12.72□□□□□ -0.37
VCX3A-203ENST00000612369 ARL6IP6Q8N6S5 226 aa12.72□□□□□ -0.37
VCX3A-203ENST00000612369 OTORQ9NRC9 128 aa12.72□□□□□ -0.37
VCX3A-203ENST00000612369 IGHV1OR15-1A0A075B7D0 117 aa12.71□□□□□ -0.37
VCX3A-203ENST00000612369 DIRC3C9JPN6 131 aa12.71□□□□□ -0.37
VCX3A-203ENST00000612369 PRR9Q5T870 116 aa12.71□□□□□ -0.37
VCX3A-203ENST00000612369 TMED6Q8WW62 240 aa12.71□□□□□ -0.37
VCX3A-203ENST00000612369 AQP10Q96PS8 301 aa12.71□□□□□ -0.37
VCX3A-203ENST00000612369 TRGV2A0A075B6R0 118 aa12.7□□□□□ -0.38
VCX3A-203ENST00000612369 HOXA5P20719 270 aa12.7□□□□□ -0.38
VCX3A-203ENST00000612369 OR10G4Q8NGN3 311 aa12.7□□□□□ -0.38
VCX3A-203ENST00000612369 OR10G9Q8NGN4 311 aa12.7□□□□□ -0.38
VCX3A-203ENST00000612369 OR10G7Q8NGN6 311 aa12.7□□□□□ -0.38
VCX3A-203ENST00000612369 OR2G3Q8NGZ4 309 aa12.7□□□□□ -0.38
VCX3A-203ENST00000612369 ZNRF2Q8NHG8 242 aa12.7□□□□□ -0.38
VCX3A-203ENST00000612369 Q8TAT8 98 aa12.7□□□□□ -0.38
VCX3A-203ENST00000612369 CMTM2Q8TAZ6 248 aa12.7□□□□□ -0.38
VCX3A-203ENST00000612369 ARPC5LQ9BPX5 153 aa12.7□□□□□ -0.38
VCX3A-203ENST00000612369 DNAH17Q9UFH2 4485 aa12.7□□□□□ -0.38
VCX3A-203ENST00000612369 FAT2Q9NYQ8 4349 aa12.7□□□□□ -0.38
VCX3A-203ENST00000612369 A0A1B0GVY2 172 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms