RNA–Protein interactions for RNA: ENST00000611833.4

NEK3-206, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,345 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-206ENST00000611833 A0A087X0K7 114 aa13.32□□□□□ -0.28
NEK3-206ENST00000611833 CENPVL3A0A0U1RRI6 287 aa13.32□□□□□ -0.28
NEK3-206ENST00000611833 FABP5P3A8MUU1 101 aa13.32□□□□□ -0.28
NEK3-206ENST00000611833 SFTPCP11686 197 aa13.32□□□□□ -0.28
NEK3-206ENST00000611833 EEF1AKMT3Q96AZ1 226 aa13.32□□□□□ -0.28
NEK3-206ENST00000611833 CCDC140Q96MF4 163 aa13.32□□□□□ -0.28
NEK3-206ENST00000611833 MS4A6AQ9H2W1 248 aa13.32□□□□□ -0.28
NEK3-206ENST00000611833 AKAP6Q13023 2319 aa13.32□□□□□ -0.28
NEK3-206ENST00000611833 IGHV3OR16-13A0A075B7E8 117 aa13.31□□□□□ -0.28
NEK3-206ENST00000611833 IGHV3-74A0A0B4J1X5 117 aa13.31□□□□□ -0.28
NEK3-206ENST00000611833 PRAC2D3DTV9 90 aa13.31□□□□□ -0.28
NEK3-206ENST00000611833 GNLYP22749 145 aa13.31□□□□□ -0.28
NEK3-206ENST00000611833 LOXL1Q08397 574 aaPredicted RBP13.31□□□□□ -0.28
NEK3-206ENST00000611833 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.31□□□□□ -0.28
NEK3-206ENST00000611833 OR8A1Q8NGG7 326 aa13.31□□□□□ -0.28
NEK3-206ENST00000611833 SCRT2Q9NQ03 307 aa13.31□□□□□ -0.28
NEK3-206ENST00000611833 ZFHX3Q15911 3703 aa13.31□□□□□ -0.28
NEK3-206ENST00000611833 IGLC6P0CF74 106 aa13.31□□□□□ -0.28
NEK3-206ENST00000611833 FOSL1P15407 271 aa13.31□□□□□ -0.28
NEK3-206ENST00000611833 KLK9Q2XQG4 91 aa13.31□□□□□ -0.28
NEK3-206ENST00000611833 KLK9Q9UKQ9 250 aa13.31□□□□□ -0.28
NEK3-206ENST00000611833 SMKR1H3BMG3 65 aa13.3□□□□□ -0.28
NEK3-206ENST00000611833 ORAOV1Q8WV07 137 aa13.3□□□□□ -0.28
NEK3-206ENST00000611833 SLC50A1Q9BRV3 221 aa13.3□□□□□ -0.28
NEK3-206ENST00000611833 NCR2O95944 276 aa13.3□□□□□ -0.28
NEK3-206ENST00000611833 SRSF2Q01130 221 aaKnown RBP13.3□□□□□ -0.28
NEK3-206ENST00000611833 A0A096LNJ9 63 aa13.29□□□□□ -0.28
NEK3-206ENST00000611833 IGHV3-49A0A0A0MS15 119 aa13.29□□□□□ -0.28
NEK3-206ENST00000611833 TRBV7-1A0A0A6YYK4 115 aa13.29□□□□□ -0.28
NEK3-206ENST00000611833 CLPSL1A2RUU4 121 aa13.29□□□□□ -0.28
NEK3-206ENST00000611833 MPV17L2Q567V2 206 aa13.29□□□□□ -0.28
NEK3-206ENST00000611833 Q6ZVH6 145 aa13.29□□□□□ -0.28
NEK3-206ENST00000611833 METTL26Q96S19 204 aa13.29□□□□□ -0.28
NEK3-206ENST00000611833 RBAKDNA6NC62 111 aa13.29□□□□□ -0.28
NEK3-206ENST00000611833 ZNF207O43670 478 aaKnown RBP13.29□□□□□ -0.28
NEK3-206ENST00000611833 C5orf56Q8N8D9 126 aa13.29□□□□□ -0.28
NEK3-206ENST00000611833 ZNF738Q8NE65 137 aa13.29□□□□□ -0.28
NEK3-206ENST00000611833 COX11Q9Y6N1 276 aa13.29□□□□□ -0.28
NEK3-206ENST00000611833 NPYP01303 97 aa13.28□□□□□ -0.28
NEK3-206ENST00000611833 IGHV4-39P01824 125 aa13.28□□□□□ -0.28
NEK3-206ENST00000611833 FXYD7P58549 80 aa13.28□□□□□ -0.28
NEK3-206ENST00000611833 IL17RELQ6ZVW7 336 aa13.28□□□□□ -0.28
NEK3-206ENST00000611833 TMEM219Q86XT9 240 aa13.28□□□□□ -0.28
NEK3-206ENST00000611833 MSRB1Q9NZV6 116 aa13.28□□□□□ -0.28
NEK3-206ENST00000611833 CACNA1BQ00975 2339 aa13.28□□□□□ -0.28
NEK3-206ENST00000611833 IGHV3OR16-10A0A075B7F0 116 aa13.28□□□□□ -0.28
NEK3-206ENST00000611833 TCF21O43680 179 aa13.28□□□□□ -0.28
NEK3-206ENST00000611833 NUDT3O95989 172 aa13.28□□□□□ -0.28
NEK3-206ENST00000611833 ATP5G2Q06055 141 aa13.28□□□□□ -0.28
NEK3-206ENST00000611833 ZNF575Q86XF7 245 aa13.28□□□□□ -0.28
NEK3-206ENST00000611833 HBDP02042 147 aa13.27□□□□□ -0.28
NEK3-206ENST00000611833 VPS13CQ709C8 3753 aa13.27□□□□□ -0.29
NEK3-206ENST00000611833 LINC01559Q495D7 138 aa13.26□□□□□ -0.29
NEK3-206ENST00000611833 AGPAT4-IT1Q9H0P7 198 aa13.26□□□□□ -0.29
NEK3-206ENST00000611833 CELSR1Q9NYQ6 3014 aa13.26□□□□□ -0.29
NEK3-206ENST00000611833 PPIFP30405 207 aaKnown RBP13.25□□□□□ -0.29
NEK3-206ENST00000611833 TMEM78Q5T7P6 136 aa13.25□□□□□ -0.29
NEK3-206ENST00000611833 PRSS57Q6UWY2 283 aa13.25□□□□□ -0.29
NEK3-206ENST00000611833 MOB4Q9Y3A3 225 aa13.25□□□□□ -0.29
NEK3-206ENST00000611833 TRAV41A0A0B4J266 112 aa13.25□□□□□ -0.29
NEK3-206ENST00000611833 PTTG1IPP53801 180 aa13.25□□□□□ -0.29
NEK3-206ENST00000611833 C12orf54Q6X4T0 127 aa13.25□□□□□ -0.29
NEK3-206ENST00000611833 CNFNQ9BYD5 112 aa13.25□□□□□ -0.29
NEK3-206ENST00000611833 LINC00527Q9UJ94 153 aa13.25□□□□□ -0.29
NEK3-206ENST00000611833 ABCA2Q9BZC7 2435 aa13.25□□□□□ -0.29
NEK3-206ENST00000611833 BVES-AS1Q5T3Y7 98 aa13.24□□□□□ -0.29
NEK3-206ENST00000611833 C8orf86Q6ZUL3 223 aa13.24□□□□□ -0.29
NEK3-206ENST00000611833 RNF185Q96GF1 192 aa13.24□□□□□ -0.29
NEK3-206ENST00000611833 MAP1LC3AQ9H492 121 aa13.24□□□□□ -0.29
NEK3-206ENST00000611833 TRAV8-2A0A0B4J237 113 aa13.24□□□□□ -0.29
NEK3-206ENST00000611833 PPBPP02775 128 aa13.24□□□□□ -0.29
NEK3-206ENST00000611833 COX8AP10176 69 aa13.24□□□□□ -0.29
NEK3-206ENST00000611833 PAX8Q06710 450 aa13.24□□□□□ -0.29
NEK3-206ENST00000611833 CACNG7P62955 275 aa13.23□□□□□ -0.29
NEK3-206ENST00000611833 HIST1H1AQ02539 215 aaPredicted RBP13.23□□□□□ -0.29
NEK3-206ENST00000611833 LGALS9BQ3B8N2 356 aa13.23□□□□□ -0.29
NEK3-206ENST00000611833 LGALS9CQ6DKI2 356 aa13.23□□□□□ -0.29
NEK3-206ENST00000611833 IFI27L1Q96BM0 104 aa13.23□□□□□ -0.29
NEK3-206ENST00000611833 IGKV3D-20A0A0C4DH25 116 aa13.22□□□□□ -0.29
NEK3-206ENST00000611833 SNAI2O43623 268 aa13.22□□□□□ -0.29
NEK3-206ENST00000611833 TRGV3P03979 118 aa13.22□□□□□ -0.29
NEK3-206ENST00000611833 BRD3OSQ6XYD6 125 aa13.22□□□□□ -0.29
NEK3-206ENST00000611833 PIFOQ8TCI5 191 aa13.22□□□□□ -0.29
NEK3-206ENST00000611833 MRPL53Q96EL3 112 aaKnown RBP13.22□□□□□ -0.29
NEK3-206ENST00000611833 PSMG3-AS1Q96PY0 264 aa13.22□□□□□ -0.29
NEK3-206ENST00000611833 IGHV1-69DA0A0B4J2H0 117 aa13.22□□□□□ -0.29
NEK3-206ENST00000611833 FAM223BA6NKX1 122 aa13.22□□□□□ -0.29
NEK3-206ENST00000611833 CCL25O15444 150 aa13.22□□□□□ -0.29
NEK3-206ENST00000611833 IGHV1-69P01742 117 aa13.22□□□□□ -0.29
NEK3-206ENST00000611833 FAM223AQ8IWN6 122 aa13.22□□□□□ -0.29
NEK3-206ENST00000611833 C16orf92Q96LL3 132 aa13.22□□□□□ -0.29
NEK3-206ENST00000611833 U3KQE9 123 aa13.22□□□□□ -0.29
NEK3-206ENST00000611833 IGHV4-61A0A0C4DH41 118 aa13.21□□□□□ -0.29
NEK3-206ENST00000611833 UBE2V1Q13404 147 aa13.21□□□□□ -0.29
NEK3-206ENST00000611833 TRAV40A0A0B4J280 105 aa13.21□□□□□ -0.3
NEK3-206ENST00000611833 GAS8-AS1O95177 125 aa13.21□□□□□ -0.3
NEK3-206ENST00000611833 C19orf54Q5BKX5 351 aa13.21□□□□□ -0.3
NEK3-206ENST00000611833 HIF1ANQ9NWT6 349 aa13.21□□□□□ -0.3
NEK3-206ENST00000611833 C11orf21Q9P2W6 132 aa13.21□□□□□ -0.3
NEK3-206ENST00000611833 TNFRSF6BO95407 300 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms