RNA–Protein interactions for RNA: ENST00000610556.4

SYNPO2-206, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-206ENST00000610556 NPYP01303 97 aa5.42□□□□□ -1.54
SYNPO2-206ENST00000610556 BVES-AS1Q5T3Y7 98 aa5.42□□□□□ -1.54
SYNPO2-206ENST00000610556 BCL6BQ8N143 479 aaPredicted RBP5.42□□□□□ -1.54
SYNPO2-206ENST00000610556 TMEM158Q8WZ71 300 aa5.42□□□□□ -1.54
SYNPO2-206ENST00000610556 PRR25Q96S07 402 aa5.42□□□□□ -1.54
SYNPO2-206ENST00000610556 PRTN3P24158 256 aa5.42□□□□□ -1.54
SYNPO2-206ENST00000610556 RNASE4P34096 147 aaKnown RBP5.42□□□□□ -1.54
SYNPO2-206ENST00000610556 KIR3DS1Q14943 382 aa5.42□□□□□ -1.54
SYNPO2-206ENST00000610556 ZC2HC1BQ5TFG8 222 aa5.42□□□□□ -1.54
SYNPO2-206ENST00000610556 BRD3OSQ6XYD6 125 aa5.42□□□□□ -1.54
SYNPO2-206ENST00000610556 A0A0G2JLM5 398 aa5.42□□□□□ -1.54
SYNPO2-206ENST00000610556 C2orf70A6NJV1 201 aa5.42□□□□□ -1.54
SYNPO2-206ENST00000610556 I3L2K1 104 aa5.42□□□□□ -1.54
SYNPO2-206ENST00000610556 SPRY2O43597 315 aa5.42□□□□□ -1.54
SYNPO2-206ENST00000610556 ATP5LO75964 103 aa5.42□□□□□ -1.54
SYNPO2-206ENST00000610556 SEC11AP67812 179 aa5.42□□□□□ -1.54
SYNPO2-206ENST00000610556 KLRB1Q12918 225 aa5.42□□□□□ -1.54
SYNPO2-206ENST00000610556 LY6DQ14210 128 aa5.42□□□□□ -1.54
SYNPO2-206ENST00000610556 RUSC1-AS1Q66K80 236 aa5.42□□□□□ -1.54
SYNPO2-206ENST00000610556 SIGLEC15Q6ZMC9 328 aa5.42□□□□□ -1.54
SYNPO2-206ENST00000610556 RNASE8Q8TDE3 154 aaKnown RBP5.42□□□□□ -1.54
SYNPO2-206ENST00000610556 ZNF747Q9BV97 191 aa5.42□□□□□ -1.54
SYNPO2-206ENST00000610556 NXT2Q9NPJ8 142 aaKnown RBP5.42□□□□□ -1.54
SYNPO2-206ENST00000610556 MSRB1Q9NZV6 116 aa5.42□□□□□ -1.54
SYNPO2-206ENST00000610556 JKAMPQ9P055 326 aa5.42□□□□□ -1.54
SYNPO2-206ENST00000610556 TMEM14CQ9P0S9 112 aa5.42□□□□□ -1.54
SYNPO2-206ENST00000610556 CD5LO43866 347 aa5.41□□□□□ -1.54
SYNPO2-206ENST00000610556 DPM2O94777 84 aa5.41□□□□□ -1.54
SYNPO2-206ENST00000610556 PPBPP02775 128 aa5.41□□□□□ -1.54
SYNPO2-206ENST00000610556 HSD52Q0P140 79 aa5.41□□□□□ -1.54
SYNPO2-206ENST00000610556 TTC9CQ8N5M4 171 aa5.41□□□□□ -1.54
SYNPO2-206ENST00000610556 WNK1Q9H4A3 2382 aa5.41□□□□□ -1.54
SYNPO2-206ENST00000610556 FRYQ5TBA9 3013 aa5.41□□□□□ -1.54
SYNPO2-206ENST00000610556 TRAV26-2A0A0B4J265 109 aa5.41□□□□□ -1.54
SYNPO2-206ENST00000610556 TEX22C9J3V5 150 aa5.41□□□□□ -1.54
SYNPO2-206ENST00000610556 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.41□□□□□ -1.54
SYNPO2-206ENST00000610556 IGKCP01834 107 aa5.41□□□□□ -1.54
SYNPO2-206ENST00000610556 EGR2P11161 476 aaPredicted RBP5.41□□□□□ -1.54
SYNPO2-206ENST00000610556 GATA1P15976 413 aaPredicted RBP5.41□□□□□ -1.54
SYNPO2-206ENST00000610556 IL17RELQ6ZVW7 336 aa5.41□□□□□ -1.54
SYNPO2-206ENST00000610556 OR1N2Q8NGR9 330 aa5.41□□□□□ -1.54
SYNPO2-206ENST00000610556 KLF12Q9Y4X4 402 aa5.41□□□□□ -1.54
SYNPO2-206ENST00000610556 ATP6V0E1O15342 81 aa5.41□□□□□ -1.54
SYNPO2-206ENST00000610556 TNFRSF6BO95407 300 aa5.41□□□□□ -1.54
SYNPO2-206ENST00000610556 TGFAP01135 160 aa5.41□□□□□ -1.54
SYNPO2-206ENST00000610556 IGLV1-47P01700 117 aa5.41□□□□□ -1.54
SYNPO2-206ENST00000610556 SAA4P35542 130 aa5.41□□□□□ -1.54
SYNPO2-206ENST00000610556 PSMB2P49721 201 aa5.41□□□□□ -1.54
SYNPO2-206ENST00000610556 MBD6Q96DN6 1003 aa5.41□□□□□ -1.54
SYNPO2-206ENST00000610556 JMJD8Q96S16 334 aa5.41□□□□□ -1.54
SYNPO2-206ENST00000610556 CST9LQ9H4G1 147 aa5.41□□□□□ -1.54
SYNPO2-206ENST00000610556 DKK2Q9UBU2 259 aa5.41□□□□□ -1.54
SYNPO2-206ENST00000610556 NOTCH2Q04721 2471 aa5.41□□□□□ -1.54
SYNPO2-206ENST00000610556 DSCAML1Q8TD84 2053 aa5.4□□□□□ -1.54
SYNPO2-206ENST00000610556 VWC2LB2RUY7 222 aa5.4□□□□□ -1.54
SYNPO2-206ENST00000610556 APOMO95445 188 aa5.4□□□□□ -1.54
SYNPO2-206ENST00000610556 COX8AP10176 69 aa5.4□□□□□ -1.54
SYNPO2-206ENST00000610556 ASIPP42127 132 aa5.4□□□□□ -1.54
SYNPO2-206ENST00000610556 HERVK_113P61574 105 aa5.4□□□□□ -1.54
SYNPO2-206ENST00000610556 PDE6HQ13956 83 aa5.4□□□□□ -1.54
SYNPO2-206ENST00000610556 FAM106AQ4KMX7 169 aa5.4□□□□□ -1.54
SYNPO2-206ENST00000610556 OR4X2Q8NGF9 303 aa5.4□□□□□ -1.54
SYNPO2-206ENST00000610556 SLC50A1Q9BRV3 221 aa5.4□□□□□ -1.54
SYNPO2-206ENST00000610556 SPTBN4Q9H254 2564 aa5.4□□□□□ -1.55
SYNPO2-206ENST00000610556 SMAD7O15105 426 aaKnown RBP5.4□□□□□ -1.55
SYNPO2-206ENST00000610556 TMEM170BQ5T4T1 132 aa5.4□□□□□ -1.55
SYNPO2-206ENST00000610556 SAMD5Q5TGI4 173 aa5.4□□□□□ -1.55
SYNPO2-206ENST00000610556 LCNL1Q6ZST4 164 aa5.4□□□□□ -1.55
SYNPO2-206ENST00000610556 PCP2Q8IVA1 136 aa5.4□□□□□ -1.55
SYNPO2-206ENST00000610556 LINC00574Q9H8X3 128 aa5.4□□□□□ -1.55
SYNPO2-206ENST00000610556 USP9YO00507 2555 aaPredicted RBP5.4□□□□□ -1.55
SYNPO2-206ENST00000610556 DSPP15924 2871 aaKnown RBP5.4□□□□□ -1.55
SYNPO2-206ENST00000610556 TRAV40A0A0B4J280 105 aa5.4□□□□□ -1.55
SYNPO2-206ENST00000610556 A0A1B0GXF2 115 aa5.4□□□□□ -1.55
SYNPO2-206ENST00000610556 C19orf71A6NCJ1 209 aa5.4□□□□□ -1.55
SYNPO2-206ENST00000610556 CRYGCP07315 174 aa5.4□□□□□ -1.55
SYNPO2-206ENST00000610556 ATP5J2P56134 94 aa5.4□□□□□ -1.55
SYNPO2-206ENST00000610556 PAX8Q06710 450 aa5.4□□□□□ -1.55
SYNPO2-206ENST00000610556 LOXL1Q08397 574 aaPredicted RBP5.4□□□□□ -1.55
SYNPO2-206ENST00000610556 FAM159AQ6UWV7 190 aa5.4□□□□□ -1.55
SYNPO2-206ENST00000610556 C14orf178Q8N769 122 aaPredicted RBP5.4□□□□□ -1.55
SYNPO2-206ENST00000610556 TTTY13Q9BZ97 58 aa5.4□□□□□ -1.55
SYNPO2-206ENST00000610556 BPESC1Q9GZL8 116 aa5.4□□□□□ -1.55
SYNPO2-206ENST00000610556 CTRLP40313 264 aa5.39□□□□□ -1.55
SYNPO2-206ENST00000610556 EMP1P54849 157 aa5.39□□□□□ -1.55
SYNPO2-206ENST00000610556 UCNP55089 124 aa5.39□□□□□ -1.55
SYNPO2-206ENST00000610556 OCIAD2Q56VL3 154 aa5.39□□□□□ -1.55
SYNPO2-206ENST00000610556 CLEC2AQ6UVW9 174 aa5.39□□□□□ -1.55
SYNPO2-206ENST00000610556 OR9G4Q8NGQ1 327 aa5.39□□□□□ -1.55
SYNPO2-206ENST00000610556 MLST8Q9BVC4 326 aa5.39□□□□□ -1.55
SYNPO2-206ENST00000610556 ZNF256Q9Y2P7 627 aaPredicted RBP5.39□□□□□ -1.55
SYNPO2-206ENST00000610556 CHTOPQ9Y3Y2 248 aaKnown RBP5.39□□□□□ -1.55
SYNPO2-206ENST00000610556 PSMB11A5LHX3 300 aa5.39□□□□□ -1.55
SYNPO2-206ENST00000610556 M0R1W7 72 aa5.39□□□□□ -1.55
SYNPO2-206ENST00000610556 PAX1P15863 534 aa5.39□□□□□ -1.55
SYNPO2-206ENST00000610556 SRSF1Q07955 248 aaKnown RBP eCLIP5.39□□□□□ -1.55
SYNPO2-206ENST00000610556 ZNF56Q15929 161 aa5.39□□□□□ -1.55
SYNPO2-206ENST00000610556 DYNAPQ8N1N2 210 aa5.39□□□□□ -1.55
SYNPO2-206ENST00000610556 MTURNQ8N3F0 131 aa5.39□□□□□ -1.55
SYNPO2-206ENST00000610556 C8orf31Q8N9H6 132 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms