RNA–Protein interactions for RNA: ENST00000609477.5

HDDC2-209, Transcript of HD domain containing 2, humanhuman

TSL 4

Gene HDDC2, Length 564 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-209ENST00000609477 TMED6Q8WW62 240 aa10.24□□□□□ -0.77
HDDC2-209ENST00000609477 CYTL1Q9NRR1 136 aa10.24□□□□□ -0.77
HDDC2-209ENST00000609477 TMEM167BQ9NRX6 74 aa10.24□□□□□ -0.77
HDDC2-209ENST00000609477 DKK2Q9UBU2 259 aa10.24□□□□□ -0.77
HDDC2-209ENST00000609477 LENEPQ9Y5L5 61 aa10.24□□□□□ -0.77
HDDC2-209ENST00000609477 KMT2CQ8NEZ4 4911 aaKnown RBP10.24□□□□□ -0.77
HDDC2-209ENST00000609477 LYRM9A8MSI8 78 aa10.23□□□□□ -0.77
HDDC2-209ENST00000609477 KLLNB2CW77 178 aa10.23□□□□□ -0.77
HDDC2-209ENST00000609477 SMLR1H3BR10 107 aa10.23□□□□□ -0.77
HDDC2-209ENST00000609477 ZNF138P52744 262 aa10.23□□□□□ -0.77
HDDC2-209ENST00000609477 EIF5AP63241 154 aaKnown RBP10.23□□□□□ -0.77
HDDC2-209ENST00000609477 AKR1C8PQ5T2L2 129 aa10.23□□□□□ -0.77
HDDC2-209ENST00000609477 GFI1BQ5VTD9 330 aa10.23□□□□□ -0.77
HDDC2-209ENST00000609477 OR11H4Q8NGC9 324 aa10.23□□□□□ -0.77
HDDC2-209ENST00000609477 CMTM2Q8TAZ6 248 aa10.23□□□□□ -0.77
HDDC2-209ENST00000609477 C16orf74Q96GX8 76 aa10.23□□□□□ -0.77
HDDC2-209ENST00000609477 NIPSNAP3BQ9BS92 247 aa10.23□□□□□ -0.77
HDDC2-209ENST00000609477 ZNF492Q9P255 531 aa10.23□□□□□ -0.77
HDDC2-209ENST00000609477 CTXND1A0A1B0GTU2 59 aa10.22□□□□□ -0.77
HDDC2-209ENST00000609477 SERTM2A0A1B0GWG4 89 aa10.22□□□□□ -0.77
HDDC2-209ENST00000609477 KANTRA0A1W2PQU2 76 aa10.22□□□□□ -0.77
HDDC2-209ENST00000609477 PGPA6NDG6 321 aa10.22□□□□□ -0.77
HDDC2-209ENST00000609477 DIRC3C9JPN6 131 aa10.22□□□□□ -0.77
HDDC2-209ENST00000609477 ERCC8Q13216 396 aa10.22□□□□□ -0.77
HDDC2-209ENST00000609477 C12orf74Q32Q52 190 aa10.22□□□□□ -0.77
HDDC2-209ENST00000609477 CCDC28AQ8IWP9 274 aa10.22□□□□□ -0.77
HDDC2-209ENST00000609477 TCTE3Q8IZS6 198 aa10.22□□□□□ -0.77
HDDC2-209ENST00000609477 ST6GAL2Q96JF0 529 aa10.22□□□□□ -0.77
HDDC2-209ENST00000609477 PYGO2Q9BRQ0 406 aa10.22□□□□□ -0.77
HDDC2-209ENST00000609477 CELA1Q9UNI1 258 aa10.22□□□□□ -0.77
HDDC2-209ENST00000609477 YTHDF2Q9Y5A9 579 aaKnown RBP10.22□□□□□ -0.77
HDDC2-209ENST00000609477 LYSTQ99698 3801 aa10.22□□□□□ -0.77
HDDC2-209ENST00000609477 IGKV2-40A0A087WW87 121 aaPredicted RBP10.21□□□□□ -0.77
HDDC2-209ENST00000609477 ZNF705GA8MUZ8 300 aaPredicted RBP10.21□□□□□ -0.77
HDDC2-209ENST00000609477 HMGB3O15347 200 aaKnown RBP10.21□□□□□ -0.77
HDDC2-209ENST00000609477 BCL2L11O43521 198 aa10.21□□□□□ -0.77
HDDC2-209ENST00000609477 IGKV2D-40P01614 121 aaPredicted RBP10.21□□□□□ -0.77
HDDC2-209ENST00000609477 GPX1P07203 203 aa10.21□□□□□ -0.77
HDDC2-209ENST00000609477 SEC11BP0C7V7 166 aa10.21□□□□□ -0.77
HDDC2-209ENST00000609477 GCHFRP30047 84 aa10.21□□□□□ -0.77
HDDC2-209ENST00000609477 EMP1P54849 157 aa10.21□□□□□ -0.77
HDDC2-209ENST00000609477 FAM222AQ5U5X8 452 aa10.21□□□□□ -0.77
HDDC2-209ENST00000609477 Q6ZTC4 211 aa10.21□□□□□ -0.77
HDDC2-209ENST00000609477 TMEM263Q8WUH6 116 aaKnown RBP10.21□□□□□ -0.77
HDDC2-209ENST00000609477 VGLL1Q99990 258 aa10.21□□□□□ -0.77
HDDC2-209ENST00000609477 LINC00467Q9BRT7 94 aa10.21□□□□□ -0.77
HDDC2-209ENST00000609477 NKX6-2Q9C056 277 aaPredicted RBP10.21□□□□□ -0.77
HDDC2-209ENST00000609477 C7orf71A4D174 169 aa10.2□□□□□ -0.78
HDDC2-209ENST00000609477 UMAD1C9J7I0 102 aa10.2□□□□□ -0.78
HDDC2-209ENST00000609477 PRB4P10163 310 aaPredicted RBP10.2□□□□□ -0.78
HDDC2-209ENST00000609477 TIMM8BQ9Y5J9 83 aaPredicted RBP10.2□□□□□ -0.78
HDDC2-209ENST00000609477 DEFB131BA0A096LNP1 70 aa10.19□□□□□ -0.78
HDDC2-209ENST00000609477 TRAV12-3A0A0B4J271 114 aa10.19□□□□□ -0.78
HDDC2-209ENST00000609477 A0A1W2PRE2 83 aa10.19□□□□□ -0.78
HDDC2-209ENST00000609477 K7EQM0 130 aa10.19□□□□□ -0.78
HDDC2-209ENST00000609477 ZNF324O75467 553 aaPredicted RBP10.19□□□□□ -0.78
HDDC2-209ENST00000609477 KIR3DS1Q14943 382 aa10.19□□□□□ -0.78
HDDC2-209ENST00000609477 ZFAND2AQ8N6M9 145 aa10.19□□□□□ -0.78
HDDC2-209ENST00000609477 C5orf17Q8NAS9 161 aa10.19□□□□□ -0.78
HDDC2-209ENST00000609477 RNASE8Q8TDE3 154 aaKnown RBP10.19□□□□□ -0.78
HDDC2-209ENST00000609477 FAM210BQ96KR6 192 aa10.19□□□□□ -0.78
HDDC2-209ENST00000609477 HYLS1Q96M11 299 aa10.19□□□□□ -0.78
HDDC2-209ENST00000609477 PLAC8L1A1L4L8 177 aa10.18□□□□□ -0.78
HDDC2-209ENST00000609477 FBLL1A6NHQ2 334 aaKnown RBP10.18□□□□□ -0.78
HDDC2-209ENST00000609477 PFDN1O60925 122 aa10.18□□□□□ -0.78
HDDC2-209ENST00000609477 EIF3GO75821 320 aaKnown RBP eCLIP10.18□□□□□ -0.78
HDDC2-209ENST00000609477 HTN1P15515 57 aa10.18□□□□□ -0.78
HDDC2-209ENST00000609477 AZU1P20160 251 aa10.18□□□□□ -0.78
HDDC2-209ENST00000609477 DAD1P61803 113 aa10.18□□□□□ -0.78
HDDC2-209ENST00000609477 ZNF726P1Q15940 193 aa10.18□□□□□ -0.78
HDDC2-209ENST00000609477 DPPA3Q6W0C5 159 aa10.18□□□□□ -0.78
HDDC2-209ENST00000609477 TMUB2Q71RG4 321 aa10.18□□□□□ -0.78
HDDC2-209ENST00000609477 STOML3Q8TAV4 291 aa10.18□□□□□ -0.78
HDDC2-209ENST00000609477 ZNF471Q9BX82 626 aaPredicted RBP10.18□□□□□ -0.78
HDDC2-209ENST00000609477 C1QBP02746 253 aa10.17□□□□□ -0.78
HDDC2-209ENST00000609477 TPT1P13693 172 aaKnown RBP10.17□□□□□ -0.78
HDDC2-209ENST00000609477 RNASE4P34096 147 aaKnown RBP10.17□□□□□ -0.78
HDDC2-209ENST00000609477 CD300CQ08708 224 aa10.17□□□□□ -0.78
HDDC2-209ENST00000609477 ANXA2RQ3ZCQ2 193 aa10.17□□□□□ -0.78
HDDC2-209ENST00000609477 SSX7Q7RTT5 188 aa10.17□□□□□ -0.78
HDDC2-209ENST00000609477 EIF4E3Q8N5X7 224 aaKnown RBP10.17□□□□□ -0.78
HDDC2-209ENST00000609477 ZNF680Q8NEM1 530 aa10.17□□□□□ -0.78
HDDC2-209ENST00000609477 DYNC2H1Q8NCM8 4307 aaKnown RBP10.16□□□□□ -0.78
HDDC2-209ENST00000609477 SNURFLB1AK76 121 aa10.16□□□□□ -0.78
HDDC2-209ENST00000609477 IGLL5B9A064 214 aa10.16□□□□□ -0.78
HDDC2-209ENST00000609477 J3KRW8 73 aa10.16□□□□□ -0.78
HDDC2-209ENST00000609477 TCRAP04437 139 aa10.16□□□□□ -0.78
HDDC2-209ENST00000609477 PRM2P04554 102 aa10.16□□□□□ -0.78
HDDC2-209ENST00000609477 SUMO1P63165 101 aaKnown RBP10.16□□□□□ -0.78
HDDC2-209ENST00000609477 LGALSLQ3ZCW2 172 aaPredicted RBP10.16□□□□□ -0.78
HDDC2-209ENST00000609477 LGALS9CQ6DKI2 356 aa10.16□□□□□ -0.78
HDDC2-209ENST00000609477 EIF5AL1Q6IS14 154 aaKnown RBP10.16□□□□□ -0.78
HDDC2-209ENST00000609477 GOLT1AQ6ZVE7 132 aa10.16□□□□□ -0.78
HDDC2-209ENST00000609477 LINC00476Q8WZB0 136 aa10.16□□□□□ -0.78
HDDC2-209ENST00000609477 ARL2-SNX15V9GYD0 113 aa10.16□□□□□ -0.78
HDDC2-209ENST00000609477 MAP1LC3B2A6NCE7 125 aa10.15□□□□□ -0.78
HDDC2-209ENST00000609477 CBY3A6NI87 242 aa10.15□□□□□ -0.78
HDDC2-209ENST00000609477 DAZ2Q13117 558 aaKnown RBP10.15□□□□□ -0.78
HDDC2-209ENST00000609477 BTN1A1Q13410 526 aa10.15□□□□□ -0.78
HDDC2-209ENST00000609477 IBA57Q5T440 356 aaKnown RBP10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 95.4 ms