RNA–Protein interactions for RNA: ENST00000598359.5

SCAF1-203, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-203ENST00000598359 RHEBQ15382 184 aa9.89□□□□□ -0.83
SCAF1-203ENST00000598359 C12orf74Q32Q52 190 aa9.89□□□□□ -0.83
SCAF1-203ENST00000598359 LGALS9CQ6DKI2 356 aa9.89□□□□□ -0.83
SCAF1-203ENST00000598359 EBLN2Q6P2I7 272 aa9.89□□□□□ -0.83
SCAF1-203ENST00000598359 RNF182Q8N6D2 247 aa9.89□□□□□ -0.83
SCAF1-203ENST00000598359 UHRF2Q96PU4 802 aa9.89□□□□□ -0.83
SCAF1-203ENST00000598359 SLC25A39Q9BZJ4 359 aaPredicted RBP9.89□□□□□ -0.83
SCAF1-203ENST00000598359 TRAV8-2A0A0B4J237 113 aa9.88□□□□□ -0.83
SCAF1-203ENST00000598359 TMEM250H0YL14 139 aa9.88□□□□□ -0.83
SCAF1-203ENST00000598359 HYPMO75409 117 aa9.88□□□□□ -0.83
SCAF1-203ENST00000598359 OR5G3P0C626 314 aa9.88□□□□□ -0.83
SCAF1-203ENST00000598359 ZNF705DP0CH99 300 aaPredicted RBP9.88□□□□□ -0.83
SCAF1-203ENST00000598359 ZNF705BP0CI00 300 aaPredicted RBP9.88□□□□□ -0.83
SCAF1-203ENST00000598359 MEOX2P50222 304 aa9.88□□□□□ -0.83
SCAF1-203ENST00000598359 PSG9Q00887 426 aa9.88□□□□□ -0.83
SCAF1-203ENST00000598359 PATE2Q6UY27 113 aa9.88□□□□□ -0.83
SCAF1-203ENST00000598359 ZNF705AQ6ZN79 300 aaPredicted RBP9.88□□□□□ -0.83
SCAF1-203ENST00000598359 CYB561D1Q8N8Q1 229 aa9.88□□□□□ -0.83
SCAF1-203ENST00000598359 SHANK2-AS3Q9BTD1 123 aa9.88□□□□□ -0.83
SCAF1-203ENST00000598359 APLNQ9ULZ1 77 aa9.88□□□□□ -0.83
SCAF1-203ENST00000598359 HIGD1AQ9Y241 93 aa9.88□□□□□ -0.83
SCAF1-203ENST00000598359 DNAH10Q8IVF4 4471 aa9.87□□□□□ -0.83
SCAF1-203ENST00000598359 KIAA1109Q2LD37 5005 aa9.87□□□□□ -0.83
SCAF1-203ENST00000598359 TRAV10A0A0B4J240 114 aa9.87□□□□□ -0.83
SCAF1-203ENST00000598359 A0A1W2PPV4 95 aa9.87□□□□□ -0.83
SCAF1-203ENST00000598359 ZNF705FA8MVS1 300 aaPredicted RBP9.87□□□□□ -0.83
SCAF1-203ENST00000598359 C11orf94C9JXX5 98 aa9.87□□□□□ -0.83
SCAF1-203ENST00000598359 MEF2BQ02080 365 aaPredicted RBP9.87□□□□□ -0.83
SCAF1-203ENST00000598359 GCSAMLQ5JQS6 135 aa9.87□□□□□ -0.83
SCAF1-203ENST00000598359 TXNDC17Q9BRA2 123 aa9.87□□□□□ -0.83
SCAF1-203ENST00000598359 SNRPCP09234 159 aaKnown RBP9.86□□□□□ -0.83
SCAF1-203ENST00000598359 RHOBP62745 196 aa9.86□□□□□ -0.83
SCAF1-203ENST00000598359 C1orf158Q8N1D5 194 aa9.86□□□□□ -0.83
SCAF1-203ENST00000598359 ARL2-SNX15V9GYD0 113 aa9.86□□□□□ -0.83
SCAF1-203ENST00000598359 IGHV4-4A0A075B6R2 117 aa9.85□□□□□ -0.83
SCAF1-203ENST00000598359 A0A087WWC5 75 aa9.85□□□□□ -0.83
SCAF1-203ENST00000598359 DEFB131BA0A096LNP1 70 aa9.85□□□□□ -0.83
SCAF1-203ENST00000598359 C7orf77A4D0Y5 90 aa9.85□□□□□ -0.83
SCAF1-203ENST00000598359 H3BQ15 152 aa9.85□□□□□ -0.83
SCAF1-203ENST00000598359 CXorf1O96002 111 aa9.85□□□□□ -0.83
SCAF1-203ENST00000598359 CNN1P51911 297 aaKnown RBP9.85□□□□□ -0.83
SCAF1-203ENST00000598359 PLP1P60201 277 aa9.85□□□□□ -0.83
SCAF1-203ENST00000598359 SELENOTP62341 195 aa9.85□□□□□ -0.83
SCAF1-203ENST00000598359 PNRC1Q12796 327 aaPredicted RBP9.85□□□□□ -0.83
SCAF1-203ENST00000598359 SAMD13Q5VXD3 122 aa9.85□□□□□ -0.83
SCAF1-203ENST00000598359 SPATA31B1PQ5VZV4 182 aa9.85□□□□□ -0.83
SCAF1-203ENST00000598359 AMTNQ6UX39 209 aa9.85□□□□□ -0.83
SCAF1-203ENST00000598359 CBLN2Q8IUK8 224 aa9.85□□□□□ -0.83
SCAF1-203ENST00000598359 TVP23CQ96ET8 276 aa9.85□□□□□ -0.83
SCAF1-203ENST00000598359 CLUHP3Q96NS8 147 aa9.85□□□□□ -0.83
SCAF1-203ENST00000598359 GPR82Q96P67 336 aa9.85□□□□□ -0.83
SCAF1-203ENST00000598359 NEU1Q99519 415 aa9.85□□□□□ -0.83
SCAF1-203ENST00000598359 MRPL32Q9BYC8 188 aaKnown RBP9.85□□□□□ -0.83
SCAF1-203ENST00000598359 TMPRSS5Q9H3S3 457 aa9.85□□□□□ -0.83
SCAF1-203ENST00000598359 SMCO4Q9NRQ5 59 aa9.85□□□□□ -0.83
SCAF1-203ENST00000598359 TMA7Q9Y2S6 64 aaKnown RBP9.85□□□□□ -0.83
SCAF1-203ENST00000598359 M0R2Z0 102 aa9.84□□□□□ -0.83
SCAF1-203ENST00000598359 PRM2P04554 102 aa9.84□□□□□ -0.83
SCAF1-203ENST00000598359 SPINK13Q1W4C9 94 aa9.84□□□□□ -0.83
SCAF1-203ENST00000598359 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.84□□□□□ -0.83
SCAF1-203ENST00000598359 ZNF738Q8NE65 137 aa9.84□□□□□ -0.83
SCAF1-203ENST00000598359 NIPSNAP3BQ9BS92 247 aa9.84□□□□□ -0.83
SCAF1-203ENST00000598359 FUT9Q9Y231 359 aa9.84□□□□□ -0.83
SCAF1-203ENST00000598359 A8MTW9 85 aa9.83□□□□□ -0.84
SCAF1-203ENST00000598359 B4DEV8 164 aa9.83□□□□□ -0.84
SCAF1-203ENST00000598359 H3BTX0 84 aa9.83□□□□□ -0.84
SCAF1-203ENST00000598359 HMGB3O15347 200 aaKnown RBP9.83□□□□□ -0.84
SCAF1-203ENST00000598359 EIF3GO75821 320 aaKnown RBP eCLIP9.83□□□□□ -0.84
SCAF1-203ENST00000598359 ARL14EPLP0DKL9 152 aa9.83□□□□□ -0.84
SCAF1-203ENST00000598359 RPL7P18124 248 aaKnown RBP9.83□□□□□ -0.84
SCAF1-203ENST00000598359 S100A7P31151 101 aa9.83□□□□□ -0.84
SCAF1-203ENST00000598359 MORN5Q5VZ52 161 aa9.83□□□□□ -0.84
SCAF1-203ENST00000598359 TMEM88Q6PEY1 159 aa9.83□□□□□ -0.84
SCAF1-203ENST00000598359 C15orf54Q8N8G6 183 aa9.83□□□□□ -0.84
SCAF1-203ENST00000598359 SDF2L1Q9HCN8 221 aa9.83□□□□□ -0.84
SCAF1-203ENST00000598359 RPS10P5Q9NQ39 176 aa9.83□□□□□ -0.84
SCAF1-203ENST00000598359 GOLT1BQ9Y3E0 138 aa9.83□□□□□ -0.84
SCAF1-203ENST00000598359 SMIM9A6NGZ8 99 aa9.82□□□□□ -0.84
SCAF1-203ENST00000598359 F6UZH7 168 aa9.82□□□□□ -0.84
SCAF1-203ENST00000598359 M0R036 132 aa9.82□□□□□ -0.84
SCAF1-203ENST00000598359 MRPS12O15235 138 aaKnown RBP9.82□□□□□ -0.84
SCAF1-203ENST00000598359 PDE6DO43924 150 aa9.82□□□□□ -0.84
SCAF1-203ENST00000598359 PAGE4O60829 102 aa9.82□□□□□ -0.84
SCAF1-203ENST00000598359 SPART-AS1P0CW21 52 aa9.82□□□□□ -0.84
SCAF1-203ENST00000598359 GCHFRP30047 84 aa9.82□□□□□ -0.84
SCAF1-203ENST00000598359 TCTAP57738 103 aa9.82□□□□□ -0.84
SCAF1-203ENST00000598359 FAM222AQ5U5X8 452 aa9.82□□□□□ -0.84
SCAF1-203ENST00000598359 PQLC2Q6ZP29 291 aa9.82□□□□□ -0.84
SCAF1-203ENST00000598359 LINC00305Q7Z4B0 112 aa9.82□□□□□ -0.84
SCAF1-203ENST00000598359 DKK2Q9UBU2 259 aa9.82□□□□□ -0.84
SCAF1-203ENST00000598359 TRAV12-2A0A075B6T6 113 aa9.81□□□□□ -0.84
SCAF1-203ENST00000598359 A0A087X0K7 114 aa9.81□□□□□ -0.84
SCAF1-203ENST00000598359 COLCA2A8K830 154 aa9.81□□□□□ -0.84
SCAF1-203ENST00000598359 ZNF705GA8MUZ8 300 aaPredicted RBP9.81□□□□□ -0.84
SCAF1-203ENST00000598359 CRXO43186 299 aaPredicted RBP9.81□□□□□ -0.84
SCAF1-203ENST00000598359 COX7A2P2O60397 106 aa9.81□□□□□ -0.84
SCAF1-203ENST00000598359 DUSP14O95147 198 aaKnown RBP9.81□□□□□ -0.84
SCAF1-203ENST00000598359 TAS2R45P59539 299 aa9.81□□□□□ -0.84
SCAF1-203ENST00000598359 HIST1H1AQ02539 215 aaPredicted RBP9.81□□□□□ -0.84
SCAF1-203ENST00000598359 OR1L4Q8NGR5 311 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 286.8 ms